RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 GRIN2CQ14957 1233 aa7.84□□□□□ -1.15
ATM-224ENST00000534625 ABHD17AQ96GS6 310 aa7.84□□□□□ -1.15
ATM-224ENST00000534625 HCN2Q9UL51 889 aa7.84□□□□□ -1.15
ATM-224ENST00000534625 NWD1Q149M9 1564 aa7.84□□□□□ -1.15
ATM-224ENST00000534625 CHD2O14647 1828 aaKnown RBP7.83□□□□□ -1.16
ATM-224ENST00000534625 NKTRP30414 1462 aaKnown RBP7.83□□□□□ -1.16
ATM-224ENST00000534625 EFHC2Q5JST6 749 aa7.83□□□□□ -1.16
ATM-224ENST00000534625 LINC00114Q6XXX2 140 aa7.83□□□□□ -1.16
ATM-224ENST00000534625 ALYREFQ86V81 257 aaKnown RBP7.83□□□□□ -1.16
ATM-224ENST00000534625 PLEKHM2Q8IWE5 1019 aa7.83□□□□□ -1.16
ATM-224ENST00000534625 KRTAP9-2Q9BYQ4 174 aa7.83□□□□□ -1.16
ATM-224ENST00000534625 ATXN7L1Q9ULK2 861 aaPredicted RBP7.83□□□□□ -1.16
ATM-224ENST00000534625 KIAA1024Q9UPX6 916 aa7.83□□□□□ -1.16
ATM-224ENST00000534625 ADAMTS13Q76LX8 1427 aa7.83□□□□□ -1.16
ATM-224ENST00000534625 RRBP1Q9P2E9 1410 aaKnown RBP7.83□□□□□ -1.16
ATM-224ENST00000534625 HOXB4P17483 251 aaPredicted RBP7.82□□□□□ -1.16
ATM-224ENST00000534625 CTBSQ01459 385 aa7.82□□□□□ -1.16
ATM-224ENST00000534625 C1orf216Q8TAB5 229 aa7.82□□□□□ -1.16
ATM-224ENST00000534625 ZDHHC1Q8WTX9 485 aa7.82□□□□□ -1.16
ATM-224ENST00000534625 AIDAQ96BJ3 306 aa7.82□□□□□ -1.16
ATM-224ENST00000534625 ZCCHC2Q9C0B9 1178 aaKnown RBP7.82□□□□□ -1.16
ATM-224ENST00000534625 SCHIP1Q9P0W5 487 aaPredicted RBP7.82□□□□□ -1.16
ATM-224ENST00000534625 SLAIN2Q9P270 581 aa7.82□□□□□ -1.16
ATM-224ENST00000534625 PHF24Q9UPV7 400 aa7.82□□□□□ -1.16
ATM-224ENST00000534625 MSH6P52701 1360 aa7.82□□□□□ -1.16
ATM-224ENST00000534625 NAIPQ13075 1403 aa7.81□□□□□ -1.16
ATM-224ENST00000534625 USP17L3A6NCW0 530 aa7.81□□□□□ -1.16
ATM-224ENST00000534625 USP17L4A6NCW7 530 aa7.81□□□□□ -1.16
ATM-224ENST00000534625 C1QTNF9BB2RNN3 333 aa7.81□□□□□ -1.16
ATM-224ENST00000534625 ATP9BO43861 1147 aa7.81□□□□□ -1.16
ATM-224ENST00000534625 CLDN10P78369 228 aa7.81□□□□□ -1.16
ATM-224ENST00000534625 USP17L2Q6R6M4 530 aa7.81□□□□□ -1.16
ATM-224ENST00000534625 USP17L1Q7RTZ2 530 aa7.81□□□□□ -1.16
ATM-224ENST00000534625 ZIC5Q96T25 663 aa7.81□□□□□ -1.16
ATM-224ENST00000534625 CABP1Q9NZU7 370 aa7.81□□□□□ -1.16
ATM-224ENST00000534625 RGS17Q9UGC6 210 aaPredicted RBP7.81□□□□□ -1.16
ATM-224ENST00000534625 GDF2Q9UK05 429 aaPredicted RBP7.81□□□□□ -1.16
ATM-224ENST00000534625 PARP3Q9Y6F1 533 aa7.81□□□□□ -1.16
ATM-224ENST00000534625 NCOA3Q9Y6Q9 1424 aa7.8□□□□□ -1.16
ATM-224ENST00000534625 KRTAP9-6A0A140TA67 174 aa7.8□□□□□ -1.16
ATM-224ENST00000534625 A0A1W2PNR3 127 aa7.8□□□□□ -1.16
ATM-224ENST00000534625 BACH1O14867 736 aa7.8□□□□□ -1.16
ATM-224ENST00000534625 FGFR3P22607 806 aa7.8□□□□□ -1.16
ATM-224ENST00000534625 PSME1Q06323 249 aa7.8□□□□□ -1.16
ATM-224ENST00000534625 NLRP8Q86W28 1048 aa7.8□□□□□ -1.16
ATM-224ENST00000534625 ZDHHC3Q9NYG2 299 aa7.8□□□□□ -1.16
ATM-224ENST00000534625 AMOTL2Q9Y2J4 779 aa7.8□□□□□ -1.16
ATM-224ENST00000534625 PIK3R4Q99570 1358 aa7.8□□□□□ -1.16
ATM-224ENST00000534625 ROBO1Q9Y6N7 1651 aa7.79□□□□□ -1.16
ATM-224ENST00000534625 PTPRUQ92729 1446 aa7.79□□□□□ -1.16
ATM-224ENST00000534625 DKK1O94907 266 aa7.79□□□□□ -1.16
ATM-224ENST00000534625 AMPD1P23109 780 aa7.79□□□□□ -1.16
ATM-224ENST00000534625 TXLNAP40222 546 aa7.79□□□□□ -1.16
ATM-224ENST00000534625 CD163Q86VB7 1156 aa7.79□□□□□ -1.16
ATM-224ENST00000534625 TNS4Q8IZW8 715 aa7.79□□□□□ -1.16
ATM-224ENST00000534625 GOLGA6L1Q8N7Z2 621 aa7.79□□□□□ -1.16
ATM-224ENST00000534625 C7orf43Q8WVR3 580 aa7.79□□□□□ -1.16
ATM-224ENST00000534625 C19orf44Q9H6X5 657 aa7.79□□□□□ -1.16
ATM-224ENST00000534625 PCDHGC4Q9Y5F7 938 aa7.79□□□□□ -1.16
ATM-224ENST00000534625 SPHKAPQ2M3C7 1700 aa7.78□□□□□ -1.16
ATM-224ENST00000534625 ITGB7P26010 798 aa7.78□□□□□ -1.16
ATM-224ENST00000534625 TEAD4Q15561 434 aa7.78□□□□□ -1.16
ATM-224ENST00000534625 ZNF326Q5BKZ1 582 aaKnown RBP7.78□□□□□ -1.16
ATM-224ENST00000534625 TBCELQ5QJ74 424 aa7.78□□□□□ -1.16
ATM-224ENST00000534625 TRIM50Q86XT4 487 aa7.78□□□□□ -1.16
ATM-224ENST00000534625 SLC9A9Q8IVB4 645 aa7.78□□□□□ -1.16
ATM-224ENST00000534625 TPCN2Q8NHX9 752 aa7.78□□□□□ -1.16
ATM-224ENST00000534625 DIP2AQ14689 1571 aa7.78□□□□□ -1.16
ATM-224ENST00000534625 METP08581 1390 aa7.77□□□□□ -1.17
ATM-224ENST00000534625 ATXN7O15265 892 aaPredicted RBP7.77□□□□□ -1.17
ATM-224ENST00000534625 BMP4P12644 408 aa7.77□□□□□ -1.17
ATM-224ENST00000534625 TNP2Q05952 138 aa7.77□□□□□ -1.17
ATM-224ENST00000534625 NBPF1Q3BBV0 1214 aa7.77□□□□□ -1.17
ATM-224ENST00000534625 CCDC102BQ68D86 513 aa7.77□□□□□ -1.17
ATM-224ENST00000534625 FIGNL1Q6PIW4 674 aa7.77□□□□□ -1.17
ATM-224ENST00000534625 C14orf37Q86TY3 774 aa7.77□□□□□ -1.17
ATM-224ENST00000534625 GLMNQ92990 594 aa7.77□□□□□ -1.17
ATM-224ENST00000534625 BTBD6Q96KE9 485 aa7.77□□□□□ -1.17
ATM-224ENST00000534625 MKRN1Q9UHC7 482 aaKnown RBP7.77□□□□□ -1.17
ATM-224ENST00000534625 GGA1Q9UJY5 639 aa7.77□□□□□ -1.17
ATM-224ENST00000534625 NRXN3Q9Y4C0 1643 aa7.77□□□□□ -1.17
ATM-224ENST00000534625 TRPM2O94759 1503 aa7.77□□□□□ -1.17
ATM-224ENST00000534625 HFM1A2PYH4 1435 aa7.77□□□□□ -1.17
ATM-224ENST00000534625 SETBP1Q9Y6X0 1596 aa7.76□□□□□ -1.17
ATM-224ENST00000534625 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.76□□□□□ -1.17
ATM-224ENST00000534625 EML1O00423 815 aa7.76□□□□□ -1.17
ATM-224ENST00000534625 MAPTP10636 758 aaKnown RBP7.76□□□□□ -1.17
ATM-224ENST00000534625 TATP17735 454 aaPredicted RBP7.76□□□□□ -1.17
ATM-224ENST00000534625 ATF3P18847 181 aa7.76□□□□□ -1.17
ATM-224ENST00000534625 NOS2P35228 1153 aa7.76□□□□□ -1.17
ATM-224ENST00000534625 CHRNA4P43681 627 aa7.76□□□□□ -1.17
ATM-224ENST00000534625 ARSJQ5FYB0 599 aaPredicted RBP7.76□□□□□ -1.17
ATM-224ENST00000534625 SH3PXD2AQ5TCZ1 1133 aa7.76□□□□□ -1.17
ATM-224ENST00000534625 POTEAQ6S8J7 498 aa7.76□□□□□ -1.17
ATM-224ENST00000534625 OGFOD1Q8N543 542 aa7.76□□□□□ -1.17
ATM-224ENST00000534625 L3MBTL2Q969R5 705 aa7.76□□□□□ -1.17
ATM-224ENST00000534625 TFIP11Q9UBB9 837 aaKnown RBP7.76□□□□□ -1.17
ATM-224ENST00000534625 CLTCL1P53675 1640 aa7.76□□□□□ -1.17
ATM-224ENST00000534625 JCADQ9P266 1359 aa7.75□□□□□ -1.17
ATM-224ENST00000534625 DCDC2BA2VCK2 349 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms