RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 UBN2Q6ZU65 1347 aa12.36□□□□□ -0.43
SOX9-AS1-213ENST00000533996 TAF7Q15545 349 aaPredicted RBP12.35□□□□□ -0.43
SOX9-AS1-213ENST00000533996 GIGYF2Q6Y7W6 1299 aaKnown RBP12.35□□□□□ -0.43
SOX9-AS1-213ENST00000533996 MICALL2Q8IY33 904 aa12.35□□□□□ -0.43
SOX9-AS1-213ENST00000533996 RSPH6AQ9H0K4 717 aa12.35□□□□□ -0.43
SOX9-AS1-213ENST00000533996 CLSPNQ9HAW4 1339 aa12.35□□□□□ -0.43
SOX9-AS1-213ENST00000533996 RPS12P25398 132 aaKnown RBP12.34□□□□□ -0.43
SOX9-AS1-213ENST00000533996 PRKAR2BP31323 418 aa12.34□□□□□ -0.43
SOX9-AS1-213ENST00000533996 TIE1P35590 1138 aa12.34□□□□□ -0.43
SOX9-AS1-213ENST00000533996 NOM1Q5C9Z4 860 aaKnown RBP12.34□□□□□ -0.43
SOX9-AS1-213ENST00000533996 TMC4Q7Z404 712 aa12.34□□□□□ -0.43
SOX9-AS1-213ENST00000533996 ABCC4O15439 1325 aa12.34□□□□□ -0.43
SOX9-AS1-213ENST00000533996 YDJCA8MPS7 323 aa12.33□□□□□ -0.44
SOX9-AS1-213ENST00000533996 GPTP24298 496 aa12.33□□□□□ -0.44
SOX9-AS1-213ENST00000533996 HABP4Q5JVS0 413 aaKnown RBP12.33□□□□□ -0.44
SOX9-AS1-213ENST00000533996 MCM10Q7L590 875 aa12.33□□□□□ -0.44
SOX9-AS1-213ENST00000533996 NGEFQ8N5V2 710 aa12.33□□□□□ -0.44
SOX9-AS1-213ENST00000533996 PNISRQ8TF01 805 aaKnown RBP12.33□□□□□ -0.44
SOX9-AS1-213ENST00000533996 HDAC9Q9UKV0 1011 aa12.33□□□□□ -0.44
SOX9-AS1-213ENST00000533996 LAMB2P55268 1798 aa12.33□□□□□ -0.44
SOX9-AS1-213ENST00000533996 FKBP1BP68106 108 aa12.32□□□□□ -0.44
SOX9-AS1-213ENST00000533996 CC2D1BQ5T0F9 858 aaKnown RBP12.32□□□□□ -0.44
SOX9-AS1-213ENST00000533996 TTLL7Q6ZT98 887 aa12.32□□□□□ -0.44
SOX9-AS1-213ENST00000533996 SAMD7Q7Z3H4 446 aa12.32□□□□□ -0.44
SOX9-AS1-213ENST00000533996 SLC51AQ86UW1 340 aa12.32□□□□□ -0.44
SOX9-AS1-213ENST00000533996 UTP14AQ9BVJ6 771 aaKnown RBP12.32□□□□□ -0.44
SOX9-AS1-213ENST00000533996 NUDCQ9Y266 331 aa12.32□□□□□ -0.44
SOX9-AS1-213ENST00000533996 RRP7AQ9Y3A4 280 aaKnown RBP12.32□□□□□ -0.44
SOX9-AS1-213ENST00000533996 SHTN1A0MZ66 631 aa12.31□□□□□ -0.44
SOX9-AS1-213ENST00000533996 FBXO46Q6PJ61 603 aaPredicted RBP12.31□□□□□ -0.44
SOX9-AS1-213ENST00000533996 C3orf67Q6ZVT6 689 aa12.31□□□□□ -0.44
SOX9-AS1-213ENST00000533996 DDX46Q7L014 1031 aaKnown RBP12.31□□□□□ -0.44
SOX9-AS1-213ENST00000533996 SULF1Q8IWU6 871 aa12.31□□□□□ -0.44
SOX9-AS1-213ENST00000533996 ZBTB3Q9H5J0 574 aa12.31□□□□□ -0.44
SOX9-AS1-213ENST00000533996 TRPC6Q9Y210 931 aa12.31□□□□□ -0.44
SOX9-AS1-213ENST00000533996 ERBB4Q15303 1308 aa12.31□□□□□ -0.44
SOX9-AS1-213ENST00000533996 DDX60Q8IY21 1712 aaKnown RBP12.31□□□□□ -0.44
SOX9-AS1-213ENST00000533996 KDM3BQ7LBC6 1761 aa12.3□□□□□ -0.44
SOX9-AS1-213ENST00000533996 ADM5C9JUS6 153 aa12.3□□□□□ -0.44
SOX9-AS1-213ENST00000533996 PSMD14O00487 310 aa12.3□□□□□ -0.44
SOX9-AS1-213ENST00000533996 GRAPQ13588 217 aa12.3□□□□□ -0.44
SOX9-AS1-213ENST00000533996 WASHC4Q2M389 1173 aa12.3□□□□□ -0.44
SOX9-AS1-213ENST00000533996 TBC1D10BQ4KMP7 808 aaPredicted RBP12.3□□□□□ -0.44
SOX9-AS1-213ENST00000533996 DLK2Q6UY11 383 aa12.3□□□□□ -0.44
SOX9-AS1-213ENST00000533996 RASAL3Q86YV0 1011 aa12.3□□□□□ -0.44
SOX9-AS1-213ENST00000533996 FBXO22Q8NEZ5 403 aa12.3□□□□□ -0.44
SOX9-AS1-213ENST00000533996 GRAPLQ8TC17 118 aaPredicted RBP12.3□□□□□ -0.44
SOX9-AS1-213ENST00000533996 ZNF296Q8WUU4 475 aaPredicted RBP12.3□□□□□ -0.44
SOX9-AS1-213ENST00000533996 CFAP53Q96M91 514 aa12.3□□□□□ -0.44
SOX9-AS1-213ENST00000533996 LRRC37AA6NMS7 1700 aa12.29□□□□□ -0.44
SOX9-AS1-213ENST00000533996 MYL6BP14649 208 aa12.29□□□□□ -0.44
SOX9-AS1-213ENST00000533996 PAPPA2Q9BXP8 1791 aa12.28□□□□□ -0.44
SOX9-AS1-213ENST00000533996 DUOX1Q9NRD9 1551 aa12.28□□□□□ -0.44
SOX9-AS1-213ENST00000533996 TM4SF4P48230 202 aa12.28□□□□□ -0.44
SOX9-AS1-213ENST00000533996 MKRN3Q13064 507 aaKnown RBP12.28□□□□□ -0.44
SOX9-AS1-213ENST00000533996 DCTN1Q14203 1278 aa12.28□□□□□ -0.44
SOX9-AS1-213ENST00000533996 KIF4BQ2VIQ3 1234 aa12.28□□□□□ -0.44
SOX9-AS1-213ENST00000533996 INTS3Q68E01 1043 aaKnown RBP12.28□□□□□ -0.44
SOX9-AS1-213ENST00000533996 NECTIN2Q92692 538 aa12.28□□□□□ -0.44
SOX9-AS1-213ENST00000533996 CFHR5Q9BXR6 569 aa12.28□□□□□ -0.44
SOX9-AS1-213ENST00000533996 GPR25O00155 361 aa12.27□□□□□ -0.45
SOX9-AS1-213ENST00000533996 EGFRP00533 1210 aa12.27□□□□□ -0.45
SOX9-AS1-213ENST00000533996 EIF4A1P60842 406 aaKnown RBP12.27□□□□□ -0.45
SOX9-AS1-213ENST00000533996 HSP90AB3PQ58FF7 597 aa12.27□□□□□ -0.45
SOX9-AS1-213ENST00000533996 RBM26Q5T8P6 1007 aaKnown RBP12.27□□□□□ -0.45
SOX9-AS1-213ENST00000533996 CDCA5Q96FF9 252 aa12.27□□□□□ -0.45
SOX9-AS1-213ENST00000533996 EYA3Q99504 573 aa12.27□□□□□ -0.45
SOX9-AS1-213ENST00000533996 MIS18AQ9NYP9 233 aa12.27□□□□□ -0.45
SOX9-AS1-213ENST00000533996 TAF1P21675 1872 aa12.27□□□□□ -0.45
SOX9-AS1-213ENST00000533996 RBBP6Q7Z6E9 1792 aaKnown RBP12.26□□□□□ -0.45
SOX9-AS1-213ENST00000533996 TTLL13PA6NNM8 815 aa12.26□□□□□ -0.45
SOX9-AS1-213ENST00000533996 GALR2O43603 387 aaPredicted RBP12.26□□□□□ -0.45
SOX9-AS1-213ENST00000533996 TBC1D8O95759 1140 aa12.26□□□□□ -0.45
SOX9-AS1-213ENST00000533996 VIL1P09327 827 aaKnown RBP12.26□□□□□ -0.45
SOX9-AS1-213ENST00000533996 GGA3Q9NZ52 723 aa12.26□□□□□ -0.45
SOX9-AS1-213ENST00000533996 PITPNM2Q9BZ72 1349 aa12.26□□□□□ -0.45
SOX9-AS1-213ENST00000533996 DLG5Q8TDM6 1919 aa12.25□□□□□ -0.45
SOX9-AS1-213ENST00000533996 FKTNO75072 461 aa12.25□□□□□ -0.45
SOX9-AS1-213ENST00000533996 U2AF1L5P0DN76 240 aaPredicted RBP12.25□□□□□ -0.45
SOX9-AS1-213ENST00000533996 U2AF1Q01081 240 aaKnown RBP eCLIP12.25□□□□□ -0.45
SOX9-AS1-213ENST00000533996 DBNDD1Q9H9R9 158 aa12.25□□□□□ -0.45
SOX9-AS1-213ENST00000533996 ZNF609O15014 1411 aa12.25□□□□□ -0.45
SOX9-AS1-213ENST00000533996 ECE2O60344 883 aa12.24□□□□□ -0.45
SOX9-AS1-213ENST00000533996 EVX2Q03828 476 aa12.24□□□□□ -0.45
SOX9-AS1-213ENST00000533996 SREBF2Q12772 1141 aa12.24□□□□□ -0.45
SOX9-AS1-213ENST00000533996 LRP10Q7Z4F1 713 aa12.24□□□□□ -0.45
SOX9-AS1-213ENST00000533996 NLRP10Q86W26 655 aa12.24□□□□□ -0.45
SOX9-AS1-213ENST00000533996 BMP2KQ9NSY1 1161 aaPredicted RBP12.24□□□□□ -0.45
SOX9-AS1-213ENST00000533996 NSFL1CQ9UNZ2 370 aaKnown RBP12.24□□□□□ -0.45
SOX9-AS1-213ENST00000533996 PSME4Q14997 1843 aa12.23□□□□□ -0.45
SOX9-AS1-213ENST00000533996 RTL9Q8NET4 1388 aa12.23□□□□□ -0.45
SOX9-AS1-213ENST00000533996 SH3TC1Q8TE82 1336 aa12.23□□□□□ -0.45
SOX9-AS1-213ENST00000533996 C6orf229H3BNL8 230 aa12.23□□□□□ -0.45
SOX9-AS1-213ENST00000533996 NEFMP07197 916 aa12.23□□□□□ -0.45
SOX9-AS1-213ENST00000533996 HCLS1P14317 486 aaPredicted RBP12.23□□□□□ -0.45
SOX9-AS1-213ENST00000533996 FXR1P51114 621 aaKnown RBP eCLIP12.23□□□□□ -0.45
SOX9-AS1-213ENST00000533996 ZNF280AP59817 542 aaPredicted RBP12.23□□□□□ -0.45
SOX9-AS1-213ENST00000533996 ANGEL2Q5VTE6 544 aaKnown RBP12.23□□□□□ -0.45
SOX9-AS1-213ENST00000533996 AGBL3Q8NEM8 1001 aa12.23□□□□□ -0.45
SOX9-AS1-213ENST00000533996 POLLQ9UGP5 575 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms