RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 PEAK1Q9H792 1746 aa10.26□□□□□ -0.77
CASP4-212ENST00000533730 MAP2P11137 1827 aaKnown RBP10.26□□□□□ -0.77
CASP4-212ENST00000533730 SIAH2O43255 324 aa10.25□□□□□ -0.77
CASP4-212ENST00000533730 PRR20EP86478 221 aa10.25□□□□□ -0.77
CASP4-212ENST00000533730 PRR20CP86479 221 aa10.25□□□□□ -0.77
CASP4-212ENST00000533730 PRR20DP86480 221 aa10.25□□□□□ -0.77
CASP4-212ENST00000533730 PRR20BP86481 221 aa10.25□□□□□ -0.77
CASP4-212ENST00000533730 PRR20AP86496 221 aa10.25□□□□□ -0.77
CASP4-212ENST00000533730 DNAJC14Q6Y2X3 702 aaPredicted RBP10.25□□□□□ -0.77
CASP4-212ENST00000533730 BPHLQ86WA6 291 aaPredicted RBP10.25□□□□□ -0.77
CASP4-212ENST00000533730 PLEKHM2Q8IWE5 1019 aa10.25□□□□□ -0.77
CASP4-212ENST00000533730 FAM174AQ8TBP5 190 aa10.25□□□□□ -0.77
CASP4-212ENST00000533730 GPSM3Q9Y4H4 160 aa10.25□□□□□ -0.77
CASP4-212ENST00000533730 PARP4Q9UKK3 1724 aaKnown RBP10.24□□□□□ -0.77
CASP4-212ENST00000533730 USP17L15C9J2P7 530 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 USP17L10C9JJH3 530 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 USP17L13C9JLJ4 530 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 USP17L12C9JPN9 530 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 USP17L11C9JVI0 530 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 USP17L21D6R901 530 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 USP17L18D6R9N7 530 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 USP17L22D6RA61 530 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 USP17L17D6RBQ6 530 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 USP17L19D6RCP7 530 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 USP17L20D6RJB6 530 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 IL2RBP14784 551 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 SSFA2P28290 1259 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 USP17L24Q0WX57 530 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 DDX10Q13206 875 aaKnown RBP10.24□□□□□ -0.77
CASP4-212ENST00000533730 PDE3BQ13370 1112 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 CRTC2Q53ET0 693 aaPredicted RBP10.24□□□□□ -0.77
CASP4-212ENST00000533730 MRGPRX2Q96LB1 330 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 IGSF5Q9NSI5 407 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 DISP2A7MBM2 1401 aa10.24□□□□□ -0.77
CASP4-212ENST00000533730 WNK3Q9BYP7 1800 aa10.23□□□□□ -0.77
CASP4-212ENST00000533730 FAM196BA6NMK8 535 aa10.23□□□□□ -0.77
CASP4-212ENST00000533730 VARSP26640 1264 aaKnown RBP10.23□□□□□ -0.77
CASP4-212ENST00000533730 ARID4AP29374 1257 aaPredicted RBP10.23□□□□□ -0.77
CASP4-212ENST00000533730 DDB1Q16531 1140 aa10.23□□□□□ -0.77
CASP4-212ENST00000533730 C1QTNF2Q9BXJ5 285 aa10.23□□□□□ -0.77
CASP4-212ENST00000533730 BRWD3Q6RI45 1802 aa10.22□□□□□ -0.77
CASP4-212ENST00000533730 EXOC5O00471 708 aa10.22□□□□□ -0.77
CASP4-212ENST00000533730 MTHFSP49914 203 aa10.22□□□□□ -0.77
CASP4-212ENST00000533730 PTK2Q05397 1052 aa10.22□□□□□ -0.77
CASP4-212ENST00000533730 FOXC1Q12948 553 aa10.22□□□□□ -0.77
CASP4-212ENST00000533730 NBPF6Q5VWK0 638 aa10.22□□□□□ -0.77
CASP4-212ENST00000533730 CCDC125Q86Z20 511 aa10.22□□□□□ -0.77
CASP4-212ENST00000533730 EHBP1Q8NDI1 1231 aa10.22□□□□□ -0.77
CASP4-212ENST00000533730 RAPGEF4Q8WZA2 1011 aa10.22□□□□□ -0.77
CASP4-212ENST00000533730 NBPF4Q96M43 638 aa10.22□□□□□ -0.77
CASP4-212ENST00000533730 KIAA1522Q9P206 1035 aaPredicted RBP10.22□□□□□ -0.77
CASP4-212ENST00000533730 PLEKHG2Q9H7P9 1386 aa10.22□□□□□ -0.77
CASP4-212ENST00000533730 TNS2Q63HR2 1409 aa10.22□□□□□ -0.77
CASP4-212ENST00000533730 EIF4A2Q14240 407 aaKnown RBP10.21□□□□□ -0.77
CASP4-212ENST00000533730 RALBP1Q15311 655 aa10.21□□□□□ -0.77
CASP4-212ENST00000533730 NOM1Q5C9Z4 860 aaKnown RBP10.21□□□□□ -0.77
CASP4-212ENST00000533730 FAM196AQ6ZSG2 479 aa10.21□□□□□ -0.77
CASP4-212ENST00000533730 CFAP53Q96M91 514 aa10.21□□□□□ -0.77
CASP4-212ENST00000533730 ARHGAP9Q9BRR9 750 aa10.21□□□□□ -0.77
CASP4-212ENST00000533730 MKRN1Q9UHC7 482 aaKnown RBP10.21□□□□□ -0.77
CASP4-212ENST00000533730 PARD3Q8TEW0 1356 aa10.21□□□□□ -0.78
CASP4-212ENST00000533730 NCAPD2Q15021 1401 aa10.21□□□□□ -0.78
CASP4-212ENST00000533730 LRRC37A3O60309 1634 aa10.21□□□□□ -0.78
CASP4-212ENST00000533730 OVOS2A0A0G2JMS6 1433 aa10.2□□□□□ -0.78
CASP4-212ENST00000533730 SOWAHDA6NJG2 315 aa10.2□□□□□ -0.78
CASP4-212ENST00000533730 TNFRSF10AO00220 468 aa10.2□□□□□ -0.78
CASP4-212ENST00000533730 TATP17735 454 aaPredicted RBP10.2□□□□□ -0.78
CASP4-212ENST00000533730 CNGB1Q14028 1251 aaPredicted RBP10.2□□□□□ -0.78
CASP4-212ENST00000533730 MPNDQ8N594 471 aa10.2□□□□□ -0.78
CASP4-212ENST00000533730 MRRFQ96E11 262 aaKnown RBP10.2□□□□□ -0.78
CASP4-212ENST00000533730 TOR4AQ9NXH8 423 aa10.2□□□□□ -0.78
CASP4-212ENST00000533730 BCL9O00512 1426 aa10.19□□□□□ -0.78
CASP4-212ENST00000533730 IGSF1Q8N6C5 1336 aa10.19□□□□□ -0.78
CASP4-212ENST00000533730 MAGEB6P1A0A0J9YX57 407 aa10.19□□□□□ -0.78
CASP4-212ENST00000533730 DIAPH1O60610 1272 aaKnown RBP10.19□□□□□ -0.78
CASP4-212ENST00000533730 ERCC3P19447 782 aa10.19□□□□□ -0.78
CASP4-212ENST00000533730 RASA1P20936 1047 aa10.19□□□□□ -0.78
CASP4-212ENST00000533730 PPP2R1AP30153 589 aa10.19□□□□□ -0.78
CASP4-212ENST00000533730 SERPINB4P48594 390 aa10.19□□□□□ -0.78
CASP4-212ENST00000533730 PTK7Q13308 1070 aa10.19□□□□□ -0.78
CASP4-212ENST00000533730 AGERQ15109 404 aa10.19□□□□□ -0.78
CASP4-212ENST00000533730 ERFEQ4G0M1 354 aa10.19□□□□□ -0.78
CASP4-212ENST00000533730 TRMT44Q8IYL2 757 aaKnown RBP10.19□□□□□ -0.78
CASP4-212ENST00000533730 ADAM32Q8TC27 787 aa10.19□□□□□ -0.78
CASP4-212ENST00000533730 RGPD2P0DJD1 1756 aa10.19□□□□□ -0.78
CASP4-212ENST00000533730 IL13P35225 146 aa10.18□□□□□ -0.78
CASP4-212ENST00000533730 SF3B2Q13435 895 aaKnown RBP10.18□□□□□ -0.78
CASP4-212ENST00000533730 USHBP1Q8N6Y0 703 aa10.18□□□□□ -0.78
CASP4-212ENST00000533730 ZCRB1Q8TBF4 217 aaKnown RBP10.18□□□□□ -0.78
CASP4-212ENST00000533730 FAM200AQ8TCP9 573 aa10.18□□□□□ -0.78
CASP4-212ENST00000533730 CLP1Q92989 425 aaKnown RBP10.18□□□□□ -0.78
CASP4-212ENST00000533730 PDZRN3Q9UPQ7 1066 aa10.18□□□□□ -0.78
CASP4-212ENST00000533730 MEGF6O75095 1541 aa10.17□□□□□ -0.78
CASP4-212ENST00000533730 NCOA4Q13772 614 aa10.17□□□□□ -0.78
CASP4-212ENST00000533730 SNIP1Q8TAD8 396 aaKnown RBP10.17□□□□□ -0.78
CASP4-212ENST00000533730 CDK15Q96Q40 435 aa10.17□□□□□ -0.78
CASP4-212ENST00000533730 SPG7Q9UQ90 795 aa10.17□□□□□ -0.78
CASP4-212ENST00000533730 NUDCQ9Y266 331 aa10.17□□□□□ -0.78
CASP4-212ENST00000533730 PCDH11XQ9BZA7 1347 aa10.16□□□□□ -0.78
CASP4-212ENST00000533730 PCDH11YQ9BZA8 1340 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms