RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	KLK14	Q9P0G3	267 aa		5.98	□□□□□ -1.45
LMO7-223	ENST00000533299	SOWAHD	A6NJG2	315 aa		5.97	□□□□□ -1.45
LMO7-223	ENST00000533299	ZNF211	Q13398	564 aa	Predicted RBP	5.97	□□□□□ -1.45
LMO7-223	ENST00000533299	NOM1	Q5C9Z4	860 aa	Known RBP	5.97	□□□□□ -1.45
LMO7-223	ENST00000533299	SAMD5	Q5TGI4	173 aa		5.97	□□□□□ -1.45
LMO7-223	ENST00000533299	SHISA2	Q6UWI4	295 aa		5.97	□□□□□ -1.45
LMO7-223	ENST00000533299	C20orf204	Q6ZNR8	217 aa		5.97	□□□□□ -1.45
LMO7-223	ENST00000533299	BIN2	Q9UBW5	565 aa	Predicted RBP	5.97	□□□□□ -1.45
LMO7-223	ENST00000533299	LRFN2	Q9ULH4	789 aa		5.97	□□□□□ -1.45
LMO7-223	ENST00000533299	PCSK2	P16519	638 aa		5.97	□□□□□ -1.45
LMO7-223	ENST00000533299	C8orf86	Q6ZUL3	223 aa		5.97	□□□□□ -1.45
LMO7-223	ENST00000533299	C7orf43	Q8WVR3	580 aa		5.97	□□□□□ -1.45
LMO7-223	ENST00000533299	GZF1	Q9H116	711 aa	Predicted RBP	5.97	□□□□□ -1.45
LMO7-223	ENST00000533299	TTC16	Q8NEE8	873 aa		5.96	□□□□□ -1.46
LMO7-223	ENST00000533299	WFDC12	Q8WWY7	111 aa		5.96	□□□□□ -1.46
LMO7-223	ENST00000533299	CEP63	Q96MT8	703 aa		5.96	□□□□□ -1.46
LMO7-223	ENST00000533299	ANO2	Q9NQ90	1003 aa		5.96	□□□□□ -1.46
LMO7-223	ENST00000533299	KRTAP9-7	A8MTY7	169 aa		5.95	□□□□□ -1.46
LMO7-223	ENST00000533299	MICAL2	O94851	1124 aa		5.95	□□□□□ -1.46
LMO7-223	ENST00000533299	MED26	O95402	600 aa		5.95	□□□□□ -1.46
LMO7-223	ENST00000533299	RPLP1	P05386	114 aa	Known RBP	5.95	□□□□□ -1.46
LMO7-223	ENST00000533299	NPR3	P17342	541 aa		5.95	□□□□□ -1.46
LMO7-223	ENST00000533299	SND1	Q7KZF4	910 aa	Known RBP eCLIP	5.95	□□□□□ -1.46
LMO7-223	ENST00000533299	BTLA	Q7Z6A9	289 aa		5.95	□□□□□ -1.46
LMO7-223	ENST00000533299	TREML1	Q86YW5	311 aa		5.95	□□□□□ -1.46
LMO7-223	ENST00000533299	HSH2D	Q96JZ2	352 aa		5.95	□□□□□ -1.46
LMO7-223	ENST00000533299	ADGRE2	Q9UHX3	823 aa		5.95	□□□□□ -1.46
LMO7-223	ENST00000533299	TNFRSF10B	O14763	440 aa		5.95	□□□□□ -1.46
LMO7-223	ENST00000533299	MPST	P25325	297 aa		5.95	□□□□□ -1.46
LMO7-223	ENST00000533299	ARSD	P51689	593 aa		5.95	□□□□□ -1.46
LMO7-223	ENST00000533299	TRIM26	Q12899	539 aa	Predicted RBP	5.95	□□□□□ -1.46
LMO7-223	ENST00000533299	PIK3R5	Q8WYR1	880 aa		5.95	□□□□□ -1.46
LMO7-223	ENST00000533299	GSC2	O15499	205 aa		5.94	□□□□□ -1.46
LMO7-223	ENST00000533299	EFS	O43281	561 aa		5.94	□□□□□ -1.46
LMO7-223	ENST00000533299	LILRB5	O75023	590 aa		5.94	□□□□□ -1.46
LMO7-223	ENST00000533299	ZAP70	P43403	619 aa		5.94	□□□□□ -1.46
LMO7-223	ENST00000533299	IDH3A	P50213	366 aa		5.94	□□□□□ -1.46
LMO7-223	ENST00000533299	MTMR3	Q13615	1198 aa		5.94	□□□□□ -1.46
LMO7-223	ENST00000533299	ZNF280C	Q8ND82	737 aa		5.94	□□□□□ -1.46
LMO7-223	ENST00000533299	NDUFB5	O43674	189 aa		5.93	□□□□□ -1.46
LMO7-223	ENST00000533299	SPINK2	P20155	84 aa		5.93	□□□□□ -1.46
LMO7-223	ENST00000533299	USP5	P45974	858 aa		5.93	□□□□□ -1.46
LMO7-223	ENST00000533299	EIF1AX	P47813	144 aa	Known RBP	5.93	□□□□□ -1.46
LMO7-223	ENST00000533299	TMCO4	Q5TGY1	634 aa		5.93	□□□□□ -1.46
LMO7-223	ENST00000533299	INTS5	Q6P9B9	1019 aa	Known RBP	5.93	□□□□□ -1.46
LMO7-223	ENST00000533299	BRD7	Q9NPI1	651 aa		5.93	□□□□□ -1.46
LMO7-223	ENST00000533299	C11orf16	Q9NQ32	467 aa		5.93	□□□□□ -1.46
LMO7-223	ENST00000533299	BRPF3	Q9ULD4	1205 aa		5.93	□□□□□ -1.46
LMO7-223	ENST00000533299	FNDC3A	Q9Y2H6	1198 aa	Known RBP	5.93	□□□□□ -1.46
LMO7-223	ENST00000533299	ETFBKMT	Q8IXQ9	262 aa		5.92	□□□□□ -1.46
LMO7-223	ENST00000533299	FMR1NB	Q8N0W7	255 aa	Predicted RBP	5.92	□□□□□ -1.46
LMO7-223	ENST00000533299	BCS1L	Q9Y276	419 aa		5.92	□□□□□ -1.46
LMO7-223	ENST00000533299	TYRO3	Q06418	890 aa		5.92	□□□□□ -1.46
LMO7-223	ENST00000533299	NEUROD1	Q13562	356 aa		5.92	□□□□□ -1.46
LMO7-223	ENST00000533299	CCDC27	Q2M243	656 aa		5.92	□□□□□ -1.46
LMO7-223	ENST00000533299	CITED4	Q96RK1	184 aa		5.92	□□□□□ -1.46
LMO7-223	ENST00000533299	DMGDH	Q9UI17	866 aa	Known RBP	5.92	□□□□□ -1.46
LMO7-223	ENST00000533299	KCNH4	Q9UQ05	1017 aa		5.92	□□□□□ -1.46
LMO7-223	ENST00000533299	MZF1	P28698	734 aa	Predicted RBP	5.91	□□□□□ -1.46
LMO7-223	ENST00000533299	NOS3	P29474	1203 aa		5.91	□□□□□ -1.46
LMO7-223	ENST00000533299	INPP5B	P32019	993 aa		5.91	□□□□□ -1.46
LMO7-223	ENST00000533299	ADH7	P40394	386 aa		5.91	□□□□□ -1.46
LMO7-223	ENST00000533299	IREB2	P48200	963 aa	Known RBP	5.91	□□□□□ -1.46
LMO7-223	ENST00000533299	SPOCD1	Q6ZMY3	1216 aa		5.91	□□□□□ -1.46
LMO7-223	ENST00000533299	ILDR2	Q71H61	639 aa		5.91	□□□□□ -1.46
LMO7-223	ENST00000533299	STRN4	Q9NRL3	753 aa		5.91	□□□□□ -1.46
LMO7-223	ENST00000533299	KCNQ4	P56696	695 aa		5.9	□□□□□ -1.46
LMO7-223	ENST00000533299	DNM1	Q05193	864 aa	Known RBP	5.9	□□□□□ -1.46
LMO7-223	ENST00000533299	EHHADH	Q08426	723 aa		5.9	□□□□□ -1.46
LMO7-223	ENST00000533299	PDE3B	Q13370	1112 aa		5.9	□□□□□ -1.46
LMO7-223	ENST00000533299	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	5.9	□□□□□ -1.46
LMO7-223	ENST00000533299	RGL4	Q8IZJ4	473 aa		5.9	□□□□□ -1.46
LMO7-223	ENST00000533299	CMTR1	Q8N1G2	835 aa	Known RBP	5.9	□□□□□ -1.46
LMO7-223	ENST00000533299	EFCC1	Q9HA90	598 aa		5.9	□□□□□ -1.46
LMO7-223	ENST00000533299	DCTN4	Q9UJW0	460 aa		5.9	□□□□□ -1.46
LMO7-223	ENST00000533299	RTCB	Q9Y3I0	505 aa	Known RBP	5.9	□□□□□ -1.46
LMO7-223	ENST00000533299	ARHGAP4	P98171	946 aa		5.9	□□□□□ -1.47
LMO7-223	ENST00000533299	TMC1	Q8TDI8	760 aa		5.9	□□□□□ -1.47
LMO7-223	ENST00000533299	GPR152	Q8TDT2	470 aa		5.9	□□□□□ -1.47
LMO7-223	ENST00000533299	EDEM1	Q92611	657 aa		5.9	□□□□□ -1.47
LMO7-223	ENST00000533299	MEGF10	Q96KG7	1140 aa		5.9	□□□□□ -1.47
LMO7-223	ENST00000533299	ZBTB39	O15060	712 aa		5.89	□□□□□ -1.47
LMO7-223	ENST00000533299	ADAMTS4	O75173	837 aa		5.89	□□□□□ -1.47
LMO7-223	ENST00000533299	WNT11	O96014	354 aa		5.89	□□□□□ -1.47
LMO7-223	ENST00000533299	MAPK1	P28482	360 aa		5.89	□□□□□ -1.47
LMO7-223	ENST00000533299	GRIK1	P39086	918 aa		5.89	□□□□□ -1.47
LMO7-223	ENST00000533299	ASIC4	Q96FT7	647 aa		5.89	□□□□□ -1.47
LMO7-223	ENST00000533299	PNMA5	Q96PV4	448 aa		5.89	□□□□□ -1.47
LMO7-223	ENST00000533299	OPLAH	O14841	1288 aa		5.88	□□□□□ -1.47
LMO7-223	ENST00000533299	NEFL	P07196	543 aa		5.88	□□□□□ -1.47
LMO7-223	ENST00000533299	ATCAY	Q86WG3	371 aa		5.88	□□□□□ -1.47
LMO7-223	ENST00000533299	DTWD1	Q8N5C7	304 aa		5.88	□□□□□ -1.47
LMO7-223	ENST00000533299	NUDT16	Q96DE0	195 aa	Known RBP	5.88	□□□□□ -1.47
LMO7-223	ENST00000533299	CCDC9	Q9Y3X0	531 aa	Known RBP	5.88	□□□□□ -1.47
LMO7-223	ENST00000533299	UBAP1L	F5GYI3	381 aa		5.88	□□□□□ -1.47
LMO7-223	ENST00000533299	FZD6	O60353	706 aa		5.88	□□□□□ -1.47
LMO7-223	ENST00000533299	PDGFA	P04085	211 aa		5.88	□□□□□ -1.47
LMO7-223	ENST00000533299	ERCC3	P19447	782 aa		5.88	□□□□□ -1.47
LMO7-223	ENST00000533299	CCIN	Q13939	588 aa		5.88	□□□□□ -1.47
LMO7-223	ENST00000533299	C8orf34	Q49A92	452 aa		5.88	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms