RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 U2AF1Q01081 240 aaKnown RBP eCLIP14.76□□□□□ -0.05
TRAPPC4-213ENST00000533149 SCARF1Q14162 830 aa14.76□□□□□ -0.05
TRAPPC4-213ENST00000533149 HSP90AB3PQ58FF7 597 aa14.76□□□□□ -0.05
TRAPPC4-213ENST00000533149 ANGEL2Q5VTE6 544 aaKnown RBP14.76□□□□□ -0.05
TRAPPC4-213ENST00000533149 FAM9BQ8IZU0 186 aa14.76□□□□□ -0.05
TRAPPC4-213ENST00000533149 YTHDC1Q96MU7 727 aaKnown RBP14.76□□□□□ -0.05
TRAPPC4-213ENST00000533149 RTL9Q8NET4 1388 aa14.76□□□□□ -0.05
TRAPPC4-213ENST00000533149 NECTIN2Q92692 538 aa14.75□□□□□ -0.05
TRAPPC4-213ENST00000533149 KCNQ5Q9NR82 932 aa14.75□□□□□ -0.05
TRAPPC4-213ENST00000533149 ASTN2O75129 1339 aaPredicted RBP14.75□□□□□ -0.05
TRAPPC4-213ENST00000533149 PITPNM2Q9BZ72 1349 aa14.75□□□□□ -0.05
TRAPPC4-213ENST00000533149 POTEFA5A3E0 1075 aa14.74□□□□□ -0.05
TRAPPC4-213ENST00000533149 ZNF280AP59817 542 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC4-213ENST00000533149 DOK7Q18PE1 504 aa14.74□□□□□ -0.05
TRAPPC4-213ENST00000533149 POLLQ9UGP5 575 aa14.74□□□□□ -0.05
TRAPPC4-213ENST00000533149 TRMT112Q9UI30 125 aaKnown RBP14.74□□□□□ -0.05
TRAPPC4-213ENST00000533149 SH3TC1Q8TE82 1336 aa14.74□□□□□ -0.05
TRAPPC4-213ENST00000533149 UBE2Q2LH0YL09 131 aa14.73□□□□□ -0.05
TRAPPC4-213ENST00000533149 ALDH1A1P00352 501 aa14.73□□□□□ -0.05
TRAPPC4-213ENST00000533149 NLRP10Q86W26 655 aa14.73□□□□□ -0.05
TRAPPC4-213ENST00000533149 AGBL3Q8NEM8 1001 aa14.73□□□□□ -0.05
TRAPPC4-213ENST00000533149 LRRC37AA6NMS7 1700 aa14.73□□□□□ -0.05
TRAPPC4-213ENST00000533149 G3V3G9 751 aa14.72□□□□□ -0.05
TRAPPC4-213ENST00000533149 LAMB2P55268 1798 aa14.72□□□□□ -0.05
TRAPPC4-213ENST00000533149 TTLL12Q14166 644 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC4-213ENST00000533149 DCAF8Q5TAQ9 597 aa14.72□□□□□ -0.05
TRAPPC4-213ENST00000533149 DDX60Q8IY21 1712 aaKnown RBP14.72□□□□□ -0.05
TRAPPC4-213ENST00000533149 ZC3H12CQ9C0D7 883 aaKnown RBP14.72□□□□□ -0.05
TRAPPC4-213ENST00000533149 TRIM17Q9Y577 477 aa14.72□□□□□ -0.05
TRAPPC4-213ENST00000533149 ZNF609O15014 1411 aa14.71□□□□□ -0.05
TRAPPC4-213ENST00000533149 NF2P35240 595 aa14.71□□□□□ -0.05
TRAPPC4-213ENST00000533149 GPSM2P81274 684 aa14.71□□□□□ -0.05
TRAPPC4-213ENST00000533149 TCIRG1Q13488 830 aa14.71□□□□□ -0.05
TRAPPC4-213ENST00000533149 MOB2Q70IA6 237 aa14.71□□□□□ -0.05
TRAPPC4-213ENST00000533149 COLQQ9Y215 455 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC4-213ENST00000533149 KDM3BQ7LBC6 1761 aa14.71□□□□□ -0.05
TRAPPC4-213ENST00000533149 NEFMP07197 916 aa14.7□□□□□ -0.06
TRAPPC4-213ENST00000533149 USP17L8P0C7I0 530 aa14.7□□□□□ -0.06
TRAPPC4-213ENST00000533149 RSBN1LQ6PCB5 846 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC4-213ENST00000533149 LRP10Q7Z4F1 713 aa14.7□□□□□ -0.06
TRAPPC4-213ENST00000533149 TBC1D16Q8TBP0 767 aa14.7□□□□□ -0.06
TRAPPC4-213ENST00000533149 THUMPD2Q9BTF0 503 aaKnown RBP14.7□□□□□ -0.06
TRAPPC4-213ENST00000533149 MYOZ2Q9NPC6 264 aa14.7□□□□□ -0.06
TRAPPC4-213ENST00000533149 DLL1O00548 723 aa14.69□□□□□ -0.06
TRAPPC4-213ENST00000533149 MKRN3Q13064 507 aaKnown RBP14.69□□□□□ -0.06
TRAPPC4-213ENST00000533149 PDIA6Q15084 440 aa14.69□□□□□ -0.06
TRAPPC4-213ENST00000533149 OTOP1Q7RTM1 612 aa14.69□□□□□ -0.06
TRAPPC4-213ENST00000533149 CELF1Q92879 486 aaKnown RBP14.69□□□□□ -0.06
TRAPPC4-213ENST00000533149 R3HDMLQ9H3Y0 253 aa14.69□□□□□ -0.06
TRAPPC4-213ENST00000533149 INHBEP58166 350 aa14.68□□□□□ -0.06
TRAPPC4-213ENST00000533149 SF3B3Q15393 1217 aaKnown RBP14.68□□□□□ -0.06
TRAPPC4-213ENST00000533149 TAF1P21675 1872 aa14.68□□□□□ -0.06
TRAPPC4-213ENST00000533149 EN2P19622 333 aaPredicted RBP14.67□□□□□ -0.06
TRAPPC4-213ENST00000533149 EIF2S2P20042 333 aaKnown RBP14.67□□□□□ -0.06
TRAPPC4-213ENST00000533149 ARMC9Q7Z3E5 817 aa14.67□□□□□ -0.06
TRAPPC4-213ENST00000533149 ARMC5Q96C12 935 aa14.67□□□□□ -0.06
TRAPPC4-213ENST00000533149 TMEM106CQ9BVX2 250 aa14.67□□□□□ -0.06
TRAPPC4-213ENST00000533149 PODXL2Q9NZ53 605 aa14.67□□□□□ -0.06
TRAPPC4-213ENST00000533149 PTPN22Q9Y2R2 807 aa14.67□□□□□ -0.06
TRAPPC4-213ENST00000533149 RBBP6Q7Z6E9 1792 aaKnown RBP14.67□□□□□ -0.06
TRAPPC4-213ENST00000533149 WDR43Q15061 677 aaKnown RBP eCLIP14.66□□□□□ -0.06
TRAPPC4-213ENST00000533149 PRAMEF18Q5VWM3 479 aa14.66□□□□□ -0.06
TRAPPC4-213ENST00000533149 COPS6Q7L5N1 327 aa14.66□□□□□ -0.06
TRAPPC4-213ENST00000533149 ERO1AQ96HE7 468 aa14.66□□□□□ -0.06
TRAPPC4-213ENST00000533149 GMLQ99445 158 aa14.66□□□□□ -0.06
TRAPPC4-213ENST00000533149 ADAMTS8Q9UP79 889 aa14.66□□□□□ -0.06
TRAPPC4-213ENST00000533149 MANSC4A6NHS7 340 aaPredicted RBP14.66□□□□□ -0.06
TRAPPC4-213ENST00000533149 RPS8P62241 208 aaKnown RBP14.66□□□□□ -0.06
TRAPPC4-213ENST00000533149 PTPN12Q05209 780 aaKnown RBP14.66□□□□□ -0.06
TRAPPC4-213ENST00000533149 AIMP1Q12904 312 aaKnown RBP14.66□□□□□ -0.06
TRAPPC4-213ENST00000533149 PROSER3Q2NL68 480 aa14.66□□□□□ -0.06
TRAPPC4-213ENST00000533149 SPRYD7Q5W111 196 aa14.66□□□□□ -0.06
TRAPPC4-213ENST00000533149 ANKIB1Q9P2G1 1089 aa14.66□□□□□ -0.06
TRAPPC4-213ENST00000533149 SCN9AQ15858 1988 aa14.65□□□□□ -0.06
TRAPPC4-213ENST00000533149 UFL1O94874 794 aa14.65□□□□□ -0.06
TRAPPC4-213ENST00000533149 IFNL1Q8IU54 200 aa14.65□□□□□ -0.06
TRAPPC4-213ENST00000533149 SLC17A8Q8NDX2 589 aa14.65□□□□□ -0.06
TRAPPC4-213ENST00000533149 XAGE3Q8WTP9 111 aa14.65□□□□□ -0.06
TRAPPC4-213ENST00000533149 GGA1Q9UJY5 639 aa14.65□□□□□ -0.06
TRAPPC4-213ENST00000533149 SCAF8Q9UPN6 1271 aaKnown RBP14.65□□□□□ -0.06
TRAPPC4-213ENST00000533149 USP17L3A6NCW0 530 aa14.64□□□□□ -0.07
TRAPPC4-213ENST00000533149 USP17L4A6NCW7 530 aa14.64□□□□□ -0.07
TRAPPC4-213ENST00000533149 ANXA1P04083 346 aa14.64□□□□□ -0.07
TRAPPC4-213ENST00000533149 NBPF9Q3BBW0 867 aa14.64□□□□□ -0.07
TRAPPC4-213ENST00000533149 USP17L1Q7RTZ2 530 aa14.64□□□□□ -0.07
TRAPPC4-213ENST00000533149 PODNQ7Z5L7 613 aa14.64□□□□□ -0.07
TRAPPC4-213ENST00000533149 OGFOD1Q8N543 542 aa14.64□□□□□ -0.07
TRAPPC4-213ENST00000533149 TSPYL4Q9UJ04 414 aa14.64□□□□□ -0.07
TRAPPC4-213ENST00000533149 HNRNPUQ00839 825 aaKnown RBP eCLIP14.63□□□□□ -0.07
TRAPPC4-213ENST00000533149 LDLRAD1Q5T700 205 aa14.63□□□□□ -0.07
TRAPPC4-213ENST00000533149 NBPF11Q86T75 865 aa14.63□□□□□ -0.07
TRAPPC4-213ENST00000533149 FAM89AQ96GI7 184 aa14.63□□□□□ -0.07
TRAPPC4-213ENST00000533149 EFCC1Q9HA90 598 aa14.63□□□□□ -0.07
TRAPPC4-213ENST00000533149 H0YGN5 161 aa14.62□□□□□ -0.07
TRAPPC4-213ENST00000533149 ZBTB48P10074 688 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC4-213ENST00000533149 MMP14P50281 582 aa14.62□□□□□ -0.07
TRAPPC4-213ENST00000533149 OTUD7BQ6GQQ9 843 aa14.62□□□□□ -0.07
TRAPPC4-213ENST00000533149 SLC10A4Q96EP9 437 aa14.62□□□□□ -0.07
TRAPPC4-213ENST00000533149 OTUD5Q96G74 571 aa14.62□□□□□ -0.07
TRAPPC4-213ENST00000533149 WNT10BO00744 389 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms