RNA–Protein interactions for RNA: ENST00000532932.5

LTBP3-221, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 3,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-221ENST00000532932 HOMER1Q86YM7 354 aa17.32■□□□□ 0.36
LTBP3-221ENST00000532932 SCRN1Q12765 414 aa17.31■□□□□ 0.36
LTBP3-221ENST00000532932 SARM1Q6SZW1 724 aa17.31■□□□□ 0.36
LTBP3-221ENST00000532932 HMG20BQ9P0W2 317 aa17.31■□□□□ 0.36
LTBP3-221ENST00000532932 GRM8O00222 908 aa17.31■□□□□ 0.36
LTBP3-221ENST00000532932 KSR2Q6VAB6 950 aa17.31■□□□□ 0.36
LTBP3-221ENST00000532932 DHX40Q8IX18 779 aaKnown RBP17.31■□□□□ 0.36
LTBP3-221ENST00000532932 CCDC66A2RUB6 948 aa17.31■□□□□ 0.36
LTBP3-221ENST00000532932 CTAGE5O15320 804 aa17.31■□□□□ 0.36
LTBP3-221ENST00000532932 NCOA5Q9HCD5 579 aaKnown RBP17.31■□□□□ 0.36
LTBP3-221ENST00000532932 NRXN3Q9Y4C0 1643 aa17.3■□□□□ 0.36
LTBP3-221ENST00000532932 NPHP4O75161 1426 aaPredicted RBP17.3■□□□□ 0.36
LTBP3-221ENST00000532932 APOBRQ0VD83 1088 aa17.3■□□□□ 0.36
LTBP3-221ENST00000532932 KRT32Q14532 448 aa17.3■□□□□ 0.36
LTBP3-221ENST00000532932 LRRN4CLQ8ND94 238 aa17.3■□□□□ 0.36
LTBP3-221ENST00000532932 ALDH1L1O75891 902 aa17.3■□□□□ 0.36
LTBP3-221ENST00000532932 HDAC5Q9UQL6 1122 aa17.3■□□□□ 0.36
LTBP3-221ENST00000532932 TECPR2O15040 1411 aa17.3■□□□□ 0.36
LTBP3-221ENST00000532932 A0A1B0GVL5 298 aa17.29■□□□□ 0.36
LTBP3-221ENST00000532932 SF3A1Q15459 793 aaKnown RBP17.29■□□□□ 0.36
LTBP3-221ENST00000532932 ISM2Q6H9L7 571 aa17.29■□□□□ 0.36
LTBP3-221ENST00000532932 IFNKQ9P0W0 207 aa17.29■□□□□ 0.36
LTBP3-221ENST00000532932 PTPDC1A2A3K4 754 aa17.29■□□□□ 0.36
LTBP3-221ENST00000532932 CHST3Q7LGC8 479 aa17.29■□□□□ 0.36
LTBP3-221ENST00000532932 NAT10Q9H0A0 1025 aaKnown RBP17.29■□□□□ 0.36
LTBP3-221ENST00000532932 VGLL3A8MV65 326 aa17.28■□□□□ 0.36
LTBP3-221ENST00000532932 NBPF6Q5VWK0 638 aa17.28■□□□□ 0.36
LTBP3-221ENST00000532932 DDX46Q7L014 1031 aaKnown RBP17.28■□□□□ 0.36
LTBP3-221ENST00000532932 RIC3Q7Z5B4 369 aa17.28■□□□□ 0.36
LTBP3-221ENST00000532932 NBPF4Q96M43 638 aa17.28■□□□□ 0.36
LTBP3-221ENST00000532932 CHMP4AQ9BY43 222 aa17.28■□□□□ 0.36
LTBP3-221ENST00000532932 CYP21A2P08686 494 aa17.28■□□□□ 0.36
LTBP3-221ENST00000532932 LRRC59Q96AG4 307 aaKnown RBP17.28■□□□□ 0.36
LTBP3-221ENST00000532932 KAZALD1Q96I82 304 aa17.28■□□□□ 0.36
LTBP3-221ENST00000532932 ZNF396Q96N95 335 aaPredicted RBP17.28■□□□□ 0.36
LTBP3-221ENST00000532932 FAM160A1Q05DH4 1040 aa17.27■□□□□ 0.36
LTBP3-221ENST00000532932 NOL10Q9BSC4 688 aaKnown RBP17.27■□□□□ 0.36
LTBP3-221ENST00000532932 ZNF446Q9NWS9 450 aa17.27■□□□□ 0.36
LTBP3-221ENST00000532932 RCOR1Q9UKL0 485 aa17.27■□□□□ 0.36
LTBP3-221ENST00000532932 GIGYF1O75420 1035 aaPredicted RBP17.27■□□□□ 0.36
LTBP3-221ENST00000532932 SLFNL1Q499Z3 407 aa17.27■□□□□ 0.36
LTBP3-221ENST00000532932 XPO4Q9C0E2 1151 aaKnown RBP17.27■□□□□ 0.36
LTBP3-221ENST00000532932 MED23Q9ULK4 1368 aa17.27■□□□□ 0.36
LTBP3-221ENST00000532932 MYL6BP14649 208 aa17.27■□□□□ 0.35
LTBP3-221ENST00000532932 SFPQP23246 707 aaKnown RBP eCLIP17.27■□□□□ 0.35
LTBP3-221ENST00000532932 GSDMDP57764 484 aa17.27■□□□□ 0.35
LTBP3-221ENST00000532932 ARHGAP29Q52LW3 1261 aa17.27■□□□□ 0.35
LTBP3-221ENST00000532932 OTUD7BQ6GQQ9 843 aa17.27■□□□□ 0.35
LTBP3-221ENST00000532932 LMOD2Q6P5Q4 547 aa17.27■□□□□ 0.35
LTBP3-221ENST00000532932 POLR3GO15318 223 aaPredicted RBP17.26■□□□□ 0.35
LTBP3-221ENST00000532932 ADD1P35611 737 aaKnown RBP17.26■□□□□ 0.35
LTBP3-221ENST00000532932 BMS1Q14692 1282 aaKnown RBP17.26■□□□□ 0.35
LTBP3-221ENST00000532932 FAM177A1Q8N128 213 aaPredicted RBP17.26■□□□□ 0.35
LTBP3-221ENST00000532932 NSUN7Q8NE18 718 aaKnown RBP17.26■□□□□ 0.35
LTBP3-221ENST00000532932 LINS1Q8NG48 757 aa17.26■□□□□ 0.35
LTBP3-221ENST00000532932 PPP1R13BQ96KQ4 1090 aa17.26■□□□□ 0.35
LTBP3-221ENST00000532932 NRDCO43847 1150 aa17.26■□□□□ 0.35
LTBP3-221ENST00000532932 E4F1Q66K89 784 aaPredicted RBP17.26■□□□□ 0.35
LTBP3-221ENST00000532932 TIGD1Q96MW7 591 aa17.26■□□□□ 0.35
LTBP3-221ENST00000532932 DNAI1Q9UI46 699 aa17.26■□□□□ 0.35
LTBP3-221ENST00000532932 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
LTBP3-221ENST00000532932 HOXB7P09629 217 aa17.25■□□□□ 0.35
LTBP3-221ENST00000532932 KCNA6P17658 529 aa17.25■□□□□ 0.35
LTBP3-221ENST00000532932 DPCR1Q3MIW9 517 aa17.25■□□□□ 0.35
LTBP3-221ENST00000532932 ALDH8A1Q9H2A2 487 aaPredicted RBP17.25■□□□□ 0.35
LTBP3-221ENST00000532932 KIF2AO00139 706 aaPredicted RBP17.25■□□□□ 0.35
LTBP3-221ENST00000532932 POLR3DP05423 398 aaPredicted RBP17.25■□□□□ 0.35
LTBP3-221ENST00000532932 GTF2E1P29083 439 aaPredicted RBP17.25■□□□□ 0.35
LTBP3-221ENST00000532932 STK38Q15208 465 aa17.24■□□□□ 0.35
LTBP3-221ENST00000532932 C1orf141Q5JVX7 400 aa17.24■□□□□ 0.35
LTBP3-221ENST00000532932 NBPF11Q86T75 865 aa17.24■□□□□ 0.35
LTBP3-221ENST00000532932 TMEM51Q9NW97 253 aa17.24■□□□□ 0.35
LTBP3-221ENST00000532932 ERBB3P21860 1342 aa17.24■□□□□ 0.35
LTBP3-221ENST00000532932 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.24■□□□□ 0.35
LTBP3-221ENST00000532932 ADGRL3Q9HAR2 1447 aa17.24■□□□□ 0.35
LTBP3-221ENST00000532932 DDX58O95786 925 aaKnown RBP17.24■□□□□ 0.35
LTBP3-221ENST00000532932 LMOD1P29536 600 aaPredicted RBP17.24■□□□□ 0.35
LTBP3-221ENST00000532932 CLCN6P51797 869 aa17.24■□□□□ 0.35
LTBP3-221ENST00000532932 PTPN21Q16825 1174 aa17.24■□□□□ 0.35
LTBP3-221ENST00000532932 STOX1Q6ZVD7 989 aa17.24■□□□□ 0.35
LTBP3-221ENST00000532932 MRPS27Q92552 414 aaKnown RBP17.24■□□□□ 0.35
LTBP3-221ENST00000532932 PCDHA7Q9UN72 937 aa17.24■□□□□ 0.35
LTBP3-221ENST00000532932 TFCP2Q12800 502 aa17.24■□□□□ 0.35
LTBP3-221ENST00000532932 EPHA10Q5JZY3 1008 aa17.24■□□□□ 0.35
LTBP3-221ENST00000532932 RAB11FIP4Q86YS3 637 aa17.24■□□□□ 0.35
LTBP3-221ENST00000532932 DBNLQ9UJU6 430 aaKnown RBP17.24■□□□□ 0.35
LTBP3-221ENST00000532932 COL15A1P39059 1388 aa17.23■□□□□ 0.35
LTBP3-221ENST00000532932 SETD1BQ9UPS6 1966 aaKnown RBP17.23■□□□□ 0.35
LTBP3-221ENST00000532932 ARMCX5Q6P1M9 558 aa17.23■□□□□ 0.35
LTBP3-221ENST00000532932 MNS1Q8NEH6 495 aa17.23■□□□□ 0.35
LTBP3-221ENST00000532932 TMX1Q9H3N1 280 aa17.23■□□□□ 0.35
LTBP3-221ENST00000532932 CTDNEP1O95476 244 aa17.23■□□□□ 0.35
LTBP3-221ENST00000532932 NDUFA8P51970 172 aa17.23■□□□□ 0.35
LTBP3-221ENST00000532932 TSGA10IPQ3SY00 556 aa17.23■□□□□ 0.35
LTBP3-221ENST00000532932 ENGASEQ8NFI3 743 aa17.23■□□□□ 0.35
LTBP3-221ENST00000532932 UBXN4Q92575 508 aa17.23■□□□□ 0.35
LTBP3-221ENST00000532932 CACNA1FO60840 1977 aa17.23■□□□□ 0.35
LTBP3-221ENST00000532932 PFKFB2O60825 505 aa17.23■□□□□ 0.35
LTBP3-221ENST00000532932 URI1O94763 535 aaPredicted RBP17.23■□□□□ 0.35
LTBP3-221ENST00000532932 NAA16Q6N069 864 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms