RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 TBC1D31Q96DN5 1066 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 MPHOSPH8Q99549 860 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 CCDC122Q5T0U0 273 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 AACSQ86V21 672 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 CHD1LQ86WJ1 897 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 CCDC125Q86Z20 511 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 PPFIA3O75145 1194 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 GFAPP14136 432 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 SLC8A1P32418 973 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 TTF1Q15361 905 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-231ENST00000532463 CCDC26Q8TAB7 109 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 CSRNP2Q9H175 543 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 SCINQ9Y6U3 715 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 CCDC7Q96M83 1385 aa9.18□□□□□ -0.94
CTNND1-231ENST00000532463 ZRANB2O95218 330 aaKnown RBP eCLIP9.17□□□□□ -0.947e-11■■■■■ 70
CTNND1-231ENST00000532463 CHMP4BP1P59074 171 aa9.17□□□□□ -0.94
CTNND1-231ENST00000532463 MSANTD4Q8NCY6 345 aa9.17□□□□□ -0.94
CTNND1-231ENST00000532463 ADAMTS8Q9UP79 889 aa9.17□□□□□ -0.94
CTNND1-231ENST00000532463 ATAD2Q6PL18 1390 aa9.17□□□□□ -0.94
CTNND1-231ENST00000532463 RILPL1Q5EBL4 403 aa9.17□□□□□ -0.94
CTNND1-231ENST00000532463 HELBQ8NG08 1087 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-231ENST00000532463 C1orf115Q9H7X2 142 aa9.17□□□□□ -0.94
CTNND1-231ENST00000532463 FRMD4BQ9Y2L6 1034 aa9.17□□□□□ -0.94
CTNND1-231ENST00000532463 RPGRIP1LQ68CZ1 1315 aa9.17□□□□□ -0.94
CTNND1-231ENST00000532463 TBCAO75347 108 aaKnown RBP9.17□□□□□ -0.94
CTNND1-231ENST00000532463 UBA7P41226 1012 aa9.17□□□□□ -0.94
CTNND1-231ENST00000532463 NUTM1Q86Y26 1132 aa9.17□□□□□ -0.94
CTNND1-231ENST00000532463 STAG1Q8WVM7 1258 aa9.17□□□□□ -0.94
CTNND1-231ENST00000532463 EXOC1Q9NV70 894 aa9.17□□□□□ -0.94
CTNND1-231ENST00000532463 HPDP32754 393 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-231ENST00000532463 GAS2L2Q8NHY3 880 aa9.17□□□□□ -0.94
CTNND1-231ENST00000532463 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-231ENST00000532463 HAUS7Q99871 368 aa9.17□□□□□ -0.94
CTNND1-231ENST00000532463 BAZ1AQ9NRL2 1556 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-231ENST00000532463 IGSF3O75054 1194 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 NLRP5P59047 1200 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 SSRP1Q08945 709 aaKnown RBP9.16□□□□□ -0.94
CTNND1-231ENST00000532463 ANKRD20A3Q5VUR7 823 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 CEP126Q9P2H0 1117 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 LRP2BPQ9P2M1 347 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 HDAC9Q9UKV0 1011 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 AFG3L2Q9Y4W6 797 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 I3L4J1 428 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 APOEP02649 317 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 GJC1P36383 396 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 LONP1P36776 959 aaKnown RBP9.16□□□□□ -0.94
CTNND1-231ENST00000532463 RUFY4Q6ZNE9 571 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 ABTB1Q969K4 478 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-231ENST00000532463 FHOD3Q2V2M9 1422 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 GOLGA6CA6NDK9 693 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 E9PMD0 336 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 RHOXF2BP0C7M4 288 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 GOLGA6DP0CG33 693 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 SKAP1Q86WV1 359 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 RHOXF2Q9BQY4 288 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 MRPL46Q9H2W6 279 aaKnown RBP9.16□□□□□ -0.94
CTNND1-231ENST00000532463 GOLGA6AQ9NYA3 693 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 CEP104O60308 925 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 RAB11FIP3O75154 756 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 HMOX1P09601 288 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 UAP1Q16222 522 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-231ENST00000532463 TWISTNBQ3B726 338 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-231ENST00000532463 SRGAP1Q7Z6B7 1085 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 IMPG2Q9BZV3 1241 aa9.16□□□□□ -0.94
CTNND1-231ENST00000532463 SERPINI2O75830 405 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 CCDC93Q567U6 631 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 GTF3C6Q969F1 213 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 PAWRQ96IZ0 340 aaKnown RBP9.15□□□□□ -0.94
CTNND1-231ENST00000532463 CCDC42Q96M95 316 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 ACTN4O43707 911 aaKnown RBP9.15□□□□□ -0.94
CTNND1-231ENST00000532463 KRT3P12035 628 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 BRD2P25440 801 aaKnown RBP9.15□□□□□ -0.94
CTNND1-231ENST00000532463 UBE2HP62256 183 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 CDR2Q01850 454 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 PSME1Q06323 249 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 HHATQ5VTY9 493 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 RASEFQ8IZ41 740 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 TACO1Q9BSH4 297 aaKnown RBP9.15□□□□□ -0.94
CTNND1-231ENST00000532463 BCAR3O75815 825 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 SLMAPQ14BN4 828 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 SEL1L2Q5TEA6 688 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 WDR78Q5VTH9 848 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 EFCAB2Q5VUJ9 269 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 TRIM68Q6AZZ1 485 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 CCDC186Q7Z3E2 898 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 ARMC9Q7Z3E5 817 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 SDCCAG3Q96C92 435 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 TRIM55Q9BYV6 548 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 MKNK2Q9HBH9 465 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 CNTLNQ9NXG0 1405 aa9.15□□□□□ -0.94
CTNND1-231ENST00000532463 PPFIA4O75335 1185 aa9.15□□□□□ -0.95
CTNND1-231ENST00000532463 CCDC92Q53HC0 331 aaPredicted RBP9.15□□□□□ -0.95
CTNND1-231ENST00000532463 IQCA1Q86XH1 822 aa9.15□□□□□ -0.95
CTNND1-231ENST00000532463 CCDC82Q8N4S0 544 aa9.15□□□□□ -0.95
CTNND1-231ENST00000532463 TMEM57Q8N5G2 664 aa9.15□□□□□ -0.95
CTNND1-231ENST00000532463 PDZD8Q8NEN9 1154 aa9.15□□□□□ -0.95
CTNND1-231ENST00000532463 FAM71BQ8TC56 605 aa9.15□□□□□ -0.95
CTNND1-231ENST00000532463 RPGRIP1Q96KN7 1286 aa9.15□□□□□ -0.95
CTNND1-231ENST00000532463 ZKSCAN5Q9Y2L8 839 aa9.15□□□□□ -0.95
CTNND1-231ENST00000532463 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms