RNA–Protein interactions for RNA: ENST00000532289.1

PTP4A2-214, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-214ENST00000532289 SREBF2Q12772 1141 aa25.78■■□□□ 1.72
PTP4A2-214ENST00000532289 TRIM17Q9Y577 477 aa25.78■■□□□ 1.72
PTP4A2-214ENST00000532289 CEP290O15078 2479 aa25.78■■□□□ 1.72
PTP4A2-214ENST00000532289 EIF4A1P60842 406 aaKnown RBP25.77■■□□□ 1.72
PTP4A2-214ENST00000532289 OTOP1Q7RTM1 612 aa25.77■■□□□ 1.72
PTP4A2-214ENST00000532289 PITPNM2Q9BZ72 1349 aa25.77■■□□□ 1.72
PTP4A2-214ENST00000532289 C6orf229H3BNL8 230 aa25.76■■□□□ 1.71
PTP4A2-214ENST00000532289 ZNF609O15014 1411 aa25.76■■□□□ 1.71
PTP4A2-214ENST00000532289 ERBB4Q15303 1308 aa25.75■■□□□ 1.71
PTP4A2-214ENST00000532289 MKRN3Q13064 507 aaKnown RBP25.75■■□□□ 1.71
PTP4A2-214ENST00000532289 LRP10Q7Z4F1 713 aa25.75■■□□□ 1.71
PTP4A2-214ENST00000532289 A0A0C4DFX4 3053 aa25.74■■□□□ 1.71
PTP4A2-214ENST00000532289 NLRP10Q86W26 655 aa25.74■■□□□ 1.71
PTP4A2-214ENST00000532289 PNISRQ8TF01 805 aaKnown RBP25.74■■□□□ 1.71
PTP4A2-214ENST00000532289 EYA3Q99504 573 aa25.74■■□□□ 1.71
PTP4A2-214ENST00000532289 PSME4Q14997 1843 aa25.73■■□□□ 1.71
PTP4A2-214ENST00000532289 GPSM2P81274 684 aa25.73■■□□□ 1.71
PTP4A2-214ENST00000532289 SLC17A8Q8NDX2 589 aa25.72■■□□□ 1.71
PTP4A2-214ENST00000532289 AGBL3Q8NEM8 1001 aa25.72■■□□□ 1.71
PTP4A2-214ENST00000532289 ARMC5Q96C12 935 aa25.72■■□□□ 1.71
PTP4A2-214ENST00000532289 OTUD5Q96G74 571 aa25.72■■□□□ 1.71
PTP4A2-214ENST00000532289 SCAF8Q9UPN6 1271 aaKnown RBP25.72■■□□□ 1.71
PTP4A2-214ENST00000532289 SH3TC1Q8TE82 1336 aa25.71■■□□□ 1.71
PTP4A2-214ENST00000532289 ALDH1A1P00352 501 aa25.71■■□□□ 1.71
PTP4A2-214ENST00000532289 PRAMEF18Q5VWM3 479 aa25.71■■□□□ 1.71
PTP4A2-214ENST00000532289 NECTIN2Q92692 538 aa25.71■■□□□ 1.71
PTP4A2-214ENST00000532289 CELF1Q92879 486 aaKnown RBP25.71■■□□□ 1.71
PTP4A2-214ENST00000532289 THUMPD2Q9BTF0 503 aaKnown RBP25.71■■□□□ 1.71
PTP4A2-214ENST00000532289 TRMT112Q9UI30 125 aaKnown RBP25.71■■□□□ 1.71
PTP4A2-214ENST00000532289 PTPN22Q9Y2R2 807 aa25.71■■□□□ 1.71
PTP4A2-214ENST00000532289 CLSPNQ9HAW4 1339 aa25.7■■□□□ 1.71
PTP4A2-214ENST00000532289 TTLL12Q14166 644 aaPredicted RBP25.7■■□□□ 1.7
PTP4A2-214ENST00000532289 PDIA6Q15084 440 aa25.7■■□□□ 1.7
PTP4A2-214ENST00000532289 TBC1D16Q8TBP0 767 aa25.7■■□□□ 1.7
PTP4A2-214ENST00000532289 MYOZ2Q9NPC6 264 aa25.7■■□□□ 1.7
PTP4A2-214ENST00000532289 COL4A1P02462 1669 aa25.7■■□□□ 1.7
PTP4A2-214ENST00000532289 DLG5Q8TDM6 1919 aa25.69■■□□□ 1.7
PTP4A2-214ENST00000532289 RSBN1LQ6PCB5 846 aaPredicted RBP25.69■■□□□ 1.7
PTP4A2-214ENST00000532289 RANBP2P49792 3224 aaKnown RBP25.69■■□□□ 1.7
PTP4A2-214ENST00000532289 COL6A3P12111 3177 aa25.69■■□□□ 1.7
PTP4A2-214ENST00000532289 HSP90AB3PQ58FF7 597 aa25.68■■□□□ 1.7
PTP4A2-214ENST00000532289 GMLQ99445 158 aa25.68■■□□□ 1.7
PTP4A2-214ENST00000532289 CUL9Q8IWT3 2517 aa25.67■■□□□ 1.7
PTP4A2-214ENST00000532289 U2AF1L5P0DN76 240 aaPredicted RBP25.67■■□□□ 1.7
PTP4A2-214ENST00000532289 U2AF1Q01081 240 aaKnown RBP eCLIP25.67■■□□□ 1.7
PTP4A2-214ENST00000532289 PTPN12Q05209 780 aaKnown RBP25.67■■□□□ 1.7
PTP4A2-214ENST00000532289 ZC3H12CQ9C0D7 883 aaKnown RBP25.67■■□□□ 1.7
PTP4A2-214ENST00000532289 NUDCQ9Y266 331 aa25.67■■□□□ 1.7
PTP4A2-214ENST00000532289 H0YGN5 161 aa25.66■■□□□ 1.7
PTP4A2-214ENST00000532289 USP17L8P0C7I0 530 aa25.66■■□□□ 1.7
PTP4A2-214ENST00000532289 TCIRG1Q13488 830 aa25.66■■□□□ 1.7
PTP4A2-214ENST00000532289 CFAP53Q96M91 514 aa25.66■■□□□ 1.7
PTP4A2-214ENST00000532289 SPRYD7Q5W111 196 aa25.65■■□□□ 1.7
PTP4A2-214ENST00000532289 LAMB1P07942 1786 aa25.64■■□□□ 1.7
PTP4A2-214ENST00000532289 SF3B3Q15393 1217 aaKnown RBP25.64■■□□□ 1.7
PTP4A2-214ENST00000532289 PROSER3Q2NL68 480 aa25.64■■□□□ 1.7
PTP4A2-214ENST00000532289 IFNL1Q8IU54 200 aa25.64■■□□□ 1.7
PTP4A2-214ENST00000532289 ERO1AQ96HE7 468 aa25.64■■□□□ 1.7
PTP4A2-214ENST00000532289 PCGF6Q9BYE7 350 aa25.64■■□□□ 1.7
PTP4A2-214ENST00000532289 NF2P35240 595 aa25.63■■□□□ 1.69
PTP4A2-214ENST00000532289 INHBEP58166 350 aa25.63■■□□□ 1.69
PTP4A2-214ENST00000532289 CNGB1Q14028 1251 aaPredicted RBP25.63■■□□□ 1.69
PTP4A2-214ENST00000532289 TMEM106CQ9BVX2 250 aa25.63■■□□□ 1.69
PTP4A2-214ENST00000532289 G3V3G9 751 aa25.62■■□□□ 1.69
PTP4A2-214ENST00000532289 NBPF9Q3BBW0 867 aa25.62■■□□□ 1.69
PTP4A2-214ENST00000532289 LDLRAD1Q5T700 205 aa25.62■■□□□ 1.69
PTP4A2-214ENST00000532289 DCAF8Q5TAQ9 597 aa25.62■■□□□ 1.69
PTP4A2-214ENST00000532289 PODXL2Q9NZ53 605 aa25.62■■□□□ 1.69
PTP4A2-214ENST00000532289 ANXA1P04083 346 aa25.61■■□□□ 1.69
PTP4A2-214ENST00000532289 CD99L2Q8TCZ2 262 aa25.61■■□□□ 1.69
PTP4A2-214ENST00000532289 MANSC4A6NHS7 340 aaPredicted RBP25.6■■□□□ 1.69
PTP4A2-214ENST00000532289 CHRDL2Q6WN34 429 aa25.6■■□□□ 1.69
PTP4A2-214ENST00000532289 ARMC9Q7Z3E5 817 aa25.6■■□□□ 1.69
PTP4A2-214ENST00000532289 ZNF333Q96JL9 665 aa25.6■■□□□ 1.69
PTP4A2-214ENST00000532289 COPS6Q7L5N1 327 aa25.59■■□□□ 1.69
PTP4A2-214ENST00000532289 EFCC1Q9HA90 598 aa25.59■■□□□ 1.69
PTP4A2-214ENST00000532289 IGF2BP3O00425 579 aaKnown RBP eCLIP25.58■■□□□ 1.69
PTP4A2-214ENST00000532289 EIF2S2P20042 333 aaKnown RBP25.58■■□□□ 1.69
PTP4A2-214ENST00000532289 RPS8P62241 208 aaKnown RBP25.58■■□□□ 1.69
PTP4A2-214ENST00000532289 UFL1O94874 794 aa25.57■■□□□ 1.68
PTP4A2-214ENST00000532289 PRKG1Q13976 671 aa25.57■■□□□ 1.68
PTP4A2-214ENST00000532289 ZNF428Q96B54 188 aa25.57■■□□□ 1.68
PTP4A2-214ENST00000532289 RBM27Q9P2N5 1060 aaKnown RBP25.57■■□□□ 1.68
PTP4A2-214ENST00000532289 CAP1Q01518 475 aa25.56■■□□□ 1.68
PTP4A2-214ENST00000532289 AIMP1Q12904 312 aaKnown RBP25.56■■□□□ 1.68
PTP4A2-214ENST00000532289 XAGE3Q8WTP9 111 aa25.56■■□□□ 1.68
PTP4A2-214ENST00000532289 USP17L3A6NCW0 530 aa25.55■■□□□ 1.68
PTP4A2-214ENST00000532289 USP17L4A6NCW7 530 aa25.55■■□□□ 1.68
PTP4A2-214ENST00000532289 USP17L1Q7RTZ2 530 aa25.55■■□□□ 1.68
PTP4A2-214ENST00000532289 FAM89AQ96GI7 184 aa25.55■■□□□ 1.68
PTP4A2-214ENST00000532289 GGA1Q9UJY5 639 aa25.55■■□□□ 1.68
PTP4A2-214ENST00000532289 WNT10BO00744 389 aa25.54■■□□□ 1.68
PTP4A2-214ENST00000532289 ANKIB1Q9P2G1 1089 aa25.54■■□□□ 1.68
PTP4A2-214ENST00000532289 ANGEL1Q9UNK9 670 aaKnown RBP25.54■■□□□ 1.68
PTP4A2-214ENST00000532289 ZNF646O15015 1829 aaPredicted RBP25.53■■□□□ 1.68
PTP4A2-214ENST00000532289 ZBTB48P10074 688 aaPredicted RBP25.53■■□□□ 1.68
PTP4A2-214ENST00000532289 CRHR2Q13324 411 aa25.53■■□□□ 1.68
PTP4A2-214ENST00000532289 SP3Q02447 781 aa25.52■■□□□ 1.68
PTP4A2-214ENST00000532289 PODNQ7Z5L7 613 aa25.52■■□□□ 1.68
PTP4A2-214ENST00000532289 SLC10A4Q96EP9 437 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms