RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 HDAC9Q9UKV0 1011 aa7.01□□□□□ -1.29
VPS11-204ENST00000530809 HPS5Q9UPZ3 1129 aa7.01□□□□□ -1.29
VPS11-204ENST00000530809 RRP7AQ9Y3A4 280 aaKnown RBP7.01□□□□□ -1.29
VPS11-204ENST00000530809 ZNF609O15014 1411 aa7.01□□□□□ -1.29
VPS11-204ENST00000530809 YDJCA8MPS7 323 aa7□□□□□ -1.29
VPS11-204ENST00000530809 U2AF1L5P0DN76 240 aaPredicted RBP7□□□□□ -1.29
VPS11-204ENST00000530809 MYL6BP14649 208 aa7□□□□□ -1.29
VPS11-204ENST00000530809 U2AF1Q01081 240 aaKnown RBP eCLIP7□□□□□ -1.29
VPS11-204ENST00000530809 GRAPQ13588 217 aa7□□□□□ -1.29
VPS11-204ENST00000530809 WASHC4Q2M389 1173 aa7□□□□□ -1.29
VPS11-204ENST00000530809 HSP90AB3PQ58FF7 597 aa7□□□□□ -1.29
VPS11-204ENST00000530809 C3orf67Q6ZVT6 689 aa7□□□□□ -1.29
VPS11-204ENST00000530809 SAMD7Q7Z3H4 446 aa7□□□□□ -1.29
VPS11-204ENST00000530809 GRAPLQ8TC17 118 aaPredicted RBP7□□□□□ -1.29
VPS11-204ENST00000530809 CSRNP1Q96S65 589 aa7□□□□□ -1.29
VPS11-204ENST00000530809 ECM29Q5VYK3 1845 aa6.99□□□□□ -1.29
VPS11-204ENST00000530809 PSMD14O00487 310 aa6.99□□□□□ -1.29
VPS11-204ENST00000530809 EIF4A1P60842 406 aaKnown RBP6.99□□□□□ -1.29
VPS11-204ENST00000530809 DCTN1Q14203 1278 aa6.99□□□□□ -1.29
VPS11-204ENST00000530809 KIF4BQ2VIQ3 1234 aa6.99□□□□□ -1.29
VPS11-204ENST00000530809 TBC1D10BQ4KMP7 808 aaPredicted RBP6.99□□□□□ -1.29
VPS11-204ENST00000530809 CCDC184Q52MB2 194 aa6.99□□□□□ -1.29
VPS11-204ENST00000530809 FBXO46Q6PJ61 603 aaPredicted RBP6.99□□□□□ -1.29
VPS11-204ENST00000530809 SLC51AQ86UW1 340 aa6.99□□□□□ -1.29
VPS11-204ENST00000530809 RASAL3Q86YV0 1011 aa6.99□□□□□ -1.29
VPS11-204ENST00000530809 NECTIN2Q92692 538 aa6.99□□□□□ -1.29
VPS11-204ENST00000530809 EYA3Q99504 573 aa6.99□□□□□ -1.29
VPS11-204ENST00000530809 SH3TC1Q8TE82 1336 aa6.99□□□□□ -1.29
VPS11-204ENST00000530809 PITPNM2Q9BZ72 1349 aa6.99□□□□□ -1.29
VPS11-204ENST00000530809 SHTN1A0MZ66 631 aa6.98□□□□□ -1.29
VPS11-204ENST00000530809 ADM5C9JUS6 153 aa6.98□□□□□ -1.29
VPS11-204ENST00000530809 GGA3Q9NZ52 723 aa6.98□□□□□ -1.29
VPS11-204ENST00000530809 SSUH2Q9Y2M2 353 aa6.98□□□□□ -1.29
VPS11-204ENST00000530809 MYH3P11055 1940 aa6.97□□□□□ -1.29
VPS11-204ENST00000530809 ZNF646O15015 1829 aaPredicted RBP6.97□□□□□ -1.29
VPS11-204ENST00000530809 ECE2O60344 883 aa6.97□□□□□ -1.29
VPS11-204ENST00000530809 SREBF2Q12772 1141 aa6.97□□□□□ -1.29
VPS11-204ENST00000530809 HABP4Q5JVS0 413 aaKnown RBP6.97□□□□□ -1.29
VPS11-204ENST00000530809 IFNLR1Q8IU57 520 aaPredicted RBP6.97□□□□□ -1.29
VPS11-204ENST00000530809 ZNF296Q8WUU4 475 aaPredicted RBP6.97□□□□□ -1.29
VPS11-204ENST00000530809 CDCA5Q96FF9 252 aa6.97□□□□□ -1.29
VPS11-204ENST00000530809 CFHR5Q9BXR6 569 aa6.97□□□□□ -1.29
VPS11-204ENST00000530809 DBNDD1Q9H9R9 158 aa6.97□□□□□ -1.29
VPS11-204ENST00000530809 MIS18AQ9NYP9 233 aa6.97□□□□□ -1.29
VPS11-204ENST00000530809 TRMT112Q9UI30 125 aaKnown RBP6.97□□□□□ -1.29
VPS11-204ENST00000530809 NSFL1CQ9UNZ2 370 aaKnown RBP6.97□□□□□ -1.29
VPS11-204ENST00000530809 G3V3G9 751 aa6.96□□□□□ -1.3
VPS11-204ENST00000530809 C6orf229H3BNL8 230 aa6.96□□□□□ -1.3
VPS11-204ENST00000530809 GPR25O00155 361 aa6.96□□□□□ -1.3
VPS11-204ENST00000530809 EGFRP00533 1210 aa6.96□□□□□ -1.3
VPS11-204ENST00000530809 VIL1P09327 827 aaKnown RBP6.96□□□□□ -1.3
VPS11-204ENST00000530809 HCLS1P14317 486 aaPredicted RBP6.96□□□□□ -1.3
VPS11-204ENST00000530809 TM4SF4P48230 202 aa6.96□□□□□ -1.3
VPS11-204ENST00000530809 RBM26Q5T8P6 1007 aaKnown RBP6.96□□□□□ -1.3
VPS11-204ENST00000530809 DCAF8Q5TAQ9 597 aa6.96□□□□□ -1.3
VPS11-204ENST00000530809 INTS3Q68E01 1043 aaKnown RBP6.96□□□□□ -1.3
VPS11-204ENST00000530809 DLK2Q6UY11 383 aa6.96□□□□□ -1.3
VPS11-204ENST00000530809 LRP10Q7Z4F1 713 aa6.96□□□□□ -1.3
VPS11-204ENST00000530809 NLRP10Q86W26 655 aa6.96□□□□□ -1.3
VPS11-204ENST00000530809 AGBL3Q8NEM8 1001 aa6.96□□□□□ -1.3
VPS11-204ENST00000530809 PNNQ9H307 717 aaKnown RBP6.96□□□□□ -1.3
VPS11-204ENST00000530809 SPEF2Q9C093 1822 aa6.96□□□□□ -1.3
VPS11-204ENST00000530809 RTL9Q8NET4 1388 aa6.95□□□□□ -1.3
VPS11-204ENST00000530809 RIMBP2O15034 1052 aa6.95□□□□□ -1.3
VPS11-204ENST00000530809 FKTNO75072 461 aa6.95□□□□□ -1.3
VPS11-204ENST00000530809 TBC1D8O95759 1140 aa6.95□□□□□ -1.3
VPS11-204ENST00000530809 ALDH1A1P00352 501 aa6.95□□□□□ -1.3
VPS11-204ENST00000530809 NF2P35240 595 aa6.95□□□□□ -1.3
VPS11-204ENST00000530809 ZNF280AP59817 542 aaPredicted RBP6.95□□□□□ -1.3
VPS11-204ENST00000530809 TCIRG1Q13488 830 aa6.95□□□□□ -1.3
VPS11-204ENST00000530809 CNGB1Q14028 1251 aaPredicted RBP6.95□□□□□ -1.3
VPS11-204ENST00000530809 WDR43Q15061 677 aaKnown RBP eCLIP6.95□□□□□ -1.3
VPS11-204ENST00000530809 PDIA6Q15084 440 aa6.95□□□□□ -1.3
VPS11-204ENST00000530809 SF3B3Q15393 1217 aaKnown RBP6.95□□□□□ -1.3
VPS11-204ENST00000530809 ANGEL2Q5VTE6 544 aaKnown RBP6.95□□□□□ -1.3
VPS11-204ENST00000530809 ZC3H12CQ9C0D7 883 aaKnown RBP6.95□□□□□ -1.3
VPS11-204ENST00000530809 BABAM1Q9NWV8 329 aa6.95□□□□□ -1.3
VPS11-204ENST00000530809 HSP90B1P14625 803 aaKnown RBP6.94□□□□□ -1.3
VPS11-204ENST00000530809 EIF2S2P20042 333 aaKnown RBP6.94□□□□□ -1.3
VPS11-204ENST00000530809 PPP2R1AP30153 589 aa6.94□□□□□ -1.3
VPS11-204ENST00000530809 MMP14P50281 582 aa6.94□□□□□ -1.3
VPS11-204ENST00000530809 GPSM2P81274 684 aa6.94□□□□□ -1.3
VPS11-204ENST00000530809 SCARF1Q14162 830 aa6.94□□□□□ -1.3
VPS11-204ENST00000530809 NFE2L2Q16236 605 aa6.94□□□□□ -1.3
VPS11-204ENST00000530809 RSBN1LQ6PCB5 846 aaPredicted RBP6.94□□□□□ -1.3
VPS11-204ENST00000530809 THUMPD2Q9BTF0 503 aaKnown RBP6.94□□□□□ -1.3
VPS11-204ENST00000530809 PODXL2Q9NZ53 605 aa6.94□□□□□ -1.3
VPS11-204ENST00000530809 POLLQ9UGP5 575 aa6.94□□□□□ -1.3
VPS11-204ENST00000530809 TSPYL4Q9UJ04 414 aa6.94□□□□□ -1.3
VPS11-204ENST00000530809 MAPK8IP3Q9UPT6 1336 aa6.94□□□□□ -1.3
VPS11-204ENST00000530809 COL4A1P02462 1669 aa6.93□□□□□ -1.3
VPS11-204ENST00000530809 COL1A1P02452 1464 aaPredicted RBP6.93□□□□□ -1.3
VPS11-204ENST00000530809 USP17L8P0C7I0 530 aa6.93□□□□□ -1.3
VPS11-204ENST00000530809 INHBEP58166 350 aa6.93□□□□□ -1.3
VPS11-204ENST00000530809 DOK7Q18PE1 504 aa6.93□□□□□ -1.3
VPS11-204ENST00000530809 COPS6Q7L5N1 327 aa6.93□□□□□ -1.3
VPS11-204ENST00000530809 TBC1D16Q8TBP0 767 aa6.93□□□□□ -1.3
VPS11-204ENST00000530809 CELF1Q92879 486 aaKnown RBP6.93□□□□□ -1.3
VPS11-204ENST00000530809 MYOZ2Q9NPC6 264 aa6.93□□□□□ -1.3
VPS11-204ENST00000530809 KCNQ5Q9NR82 932 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms