RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 HAUS7Q99871 368 aa13.75□□□□□ -0.21
USP35-207ENST00000530546 ZSWIM6Q9HCJ5 1215 aa13.75□□□□□ -0.21
USP35-207ENST00000530546 NECAB1Q8N987 351 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 ACSBG1Q96GR2 724 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 GDPD2Q9HCC8 539 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 RBM27Q9P2N5 1060 aaKnown RBP13.74□□□□□ -0.21
USP35-207ENST00000530546 SMC3Q9UQE7 1217 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 ZBTB1Q9Y2K1 713 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 TBC1D2BQ9UPU7 963 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 A0A1B0GUL7 405 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 TAF5LO75529 589 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 VPS53Q5VIR6 699 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 CEP126Q9P2H0 1117 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 MED23Q9ULK4 1368 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 RNF20Q5VTR2 975 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 LRSAM1Q6UWE0 723 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 MAP3K15Q6ZN16 1313 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 CYP19A1P11511 503 aaPredicted RBP13.73□□□□□ -0.21
USP35-207ENST00000530546 GTF2E1P29083 439 aaPredicted RBP13.73□□□□□ -0.21
USP35-207ENST00000530546 GORABQ5T7V8 394 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 GPT2Q8TD30 523 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 KCNB2Q92953 911 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 TM6SF1Q9BZW5 370 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 SNRKQ9NRH2 765 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 PAPPAQ13219 1627 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 IFIT1P09914 478 aaKnown RBP13.72□□□□□ -0.21
USP35-207ENST00000530546 PIP4K2BP78356 416 aa13.72□□□□□ -0.21
USP35-207ENST00000530546 BLOC1S2Q6QNY1 142 aa13.72□□□□□ -0.21
USP35-207ENST00000530546 PAG1Q9NWQ8 432 aa13.72□□□□□ -0.21
USP35-207ENST00000530546 NSFL1CQ9UNZ2 370 aaKnown RBP13.72□□□□□ -0.21
USP35-207ENST00000530546 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.72□□□□□ -0.21
USP35-207ENST00000530546 FAM177BA6PVY3 158 aa13.72□□□□□ -0.21
USP35-207ENST00000530546 GIGYF2Q6Y7W6 1299 aaKnown RBP13.72□□□□□ -0.21
USP35-207ENST00000530546 WDR33Q9C0J8 1336 aaKnown RBP13.72□□□□□ -0.21
USP35-207ENST00000530546 ZNF609O15014 1411 aa13.72□□□□□ -0.21
USP35-207ENST00000530546 PCCAP05165 728 aaPredicted RBP13.71□□□□□ -0.21
USP35-207ENST00000530546 PSMA5P28066 241 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 ADORA1P30542 326 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 FKBP4Q02790 459 aaKnown RBP eCLIP13.71□□□□□ -0.21
USP35-207ENST00000530546 ME3Q16798 604 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 KBTBD3Q8NAB2 608 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 DISP2A7MBM2 1401 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 IFIT5Q13325 482 aaKnown RBP13.71□□□□□ -0.21
USP35-207ENST00000530546 MCMDC2Q4G0Z9 681 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 ZBTB38Q8NAP3 1195 aaPredicted RBP13.71□□□□□ -0.21
USP35-207ENST00000530546 TPCN1Q9ULQ1 816 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 NUP188Q5SRE5 1749 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 BCL9O00512 1426 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 ROBO1Q9Y6N7 1651 aa13.71□□□□□ -0.22
USP35-207ENST00000530546 RPAP1Q9BWH6 1393 aaPredicted RBP13.71□□□□□ -0.22
USP35-207ENST00000530546 GJB2P29033 226 aa13.71□□□□□ -0.22
USP35-207ENST00000530546 NLRP10Q86W26 655 aa13.71□□□□□ -0.22
USP35-207ENST00000530546 SYT1P21579 422 aa13.7□□□□□ -0.22
USP35-207ENST00000530546 STK3Q13188 491 aa13.7□□□□□ -0.22
USP35-207ENST00000530546 TRIM28Q13263 835 aaKnown RBP13.7□□□□□ -0.22
USP35-207ENST00000530546 DDB1Q16531 1140 aa13.7□□□□□ -0.22
USP35-207ENST00000530546 ZNF710Q8N1W2 664 aa13.7□□□□□ -0.22
USP35-207ENST00000530546 TRMT112Q9UI30 125 aaKnown RBP13.7□□□□□ -0.22
USP35-207ENST00000530546 TJP1Q07157 1748 aa13.7□□□□□ -0.22
USP35-207ENST00000530546 CIAO1O76071 339 aa13.7□□□□□ -0.22
USP35-207ENST00000530546 DZIP3Q86Y13 1208 aaKnown RBP13.7□□□□□ -0.22
USP35-207ENST00000530546 GPR108Q9NPR9 543 aa13.7□□□□□ -0.22
USP35-207ENST00000530546 ZSCAN31Q96LW9 406 aaPredicted RBP13.69□□□□□ -0.22
USP35-207ENST00000530546 GREM2Q9H772 168 aa13.69□□□□□ -0.22
USP35-207ENST00000530546 STX6O43752 255 aa13.69□□□□□ -0.22
USP35-207ENST00000530546 RPS6KB1P23443 525 aa13.69□□□□□ -0.22
USP35-207ENST00000530546 ST3GAL1Q11201 340 aa13.69□□□□□ -0.22
USP35-207ENST00000530546 TTC39AQ5SRH9 613 aa13.69□□□□□ -0.22
USP35-207ENST00000530546 XAGE2Q96GT9 111 aa13.69□□□□□ -0.22
USP35-207ENST00000530546 VPS37CA5D8V6 355 aaPredicted RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 IRS4O14654 1257 aaPredicted RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 ZSCAN22P10073 491 aaPredicted RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 CBX1P83916 185 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 METTL24Q5JXM2 366 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 SH2B1Q9NRF2 756 aaPredicted RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 COL14A1Q05707 1796 aaKnown RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 ITGA6P23229 1130 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 CCDC158Q5M9N0 1113 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 DNTTIP2Q5QJE6 756 aaKnown RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 LDHAL6AQ6ZMR3 332 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 LRRC2Q9BYS8 371 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 GADD45BO75293 160 aaPredicted RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 PTMAP06454 111 aaKnown RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 PIBF1Q8WXW3 757 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 CNNM1Q9NRU3 951 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 HMG20BQ9P0W2 317 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 TMEM63CQ9P1W3 806 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 KIF3AQ9Y496 699 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 CYP21A2P08686 494 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 HSP90AB3PQ58FF7 597 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 TTLL11Q8NHH1 800 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 CNPY2Q9Y2B0 182 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 MBD3O95983 291 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 CSF1RP07333 972 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 SCARF1Q14162 830 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 PI16Q6UXB8 463 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 USP48Q86UV5 1035 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 NEK1Q96PY6 1258 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 AKAP2Q9Y2D5 859 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms