RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 JMYQ8N9B5 988 aa14.39□□□□□ -0.11
SCN3B-206ENST00000530277 hCG_1642624A0A1W2PR95 340 aa14.39□□□□□ -0.11
SCN3B-206ENST00000530277 EXOC5O00471 708 aa14.39□□□□□ -0.11
SCN3B-206ENST00000530277 DCAF5Q96JK2 942 aa14.39□□□□□ -0.11
SCN3B-206ENST00000530277 SFPQP23246 707 aaKnown RBP eCLIP14.39□□□□□ -0.11
SCN3B-206ENST00000530277 IARSP41252 1262 aaKnown RBP14.39□□□□□ -0.11
SCN3B-206ENST00000530277 PTPN14Q15678 1187 aa14.39□□□□□ -0.11
SCN3B-206ENST00000530277 EPHA10Q5JZY3 1008 aa14.39□□□□□ -0.11
SCN3B-206ENST00000530277 HMG20BQ9P0W2 317 aa14.39□□□□□ -0.11
SCN3B-206ENST00000530277 ARHGEF10O15013 1369 aa14.38□□□□□ -0.11
SCN3B-206ENST00000530277 XBP1P17861 261 aa14.38□□□□□ -0.11
SCN3B-206ENST00000530277 IL15P40933 162 aaPredicted RBP14.38□□□□□ -0.11
SCN3B-206ENST00000530277 LSG1Q9H089 658 aaKnown RBP14.38□□□□□ -0.11
SCN3B-206ENST00000530277 ANO10Q9NW15 660 aa14.38□□□□□ -0.11
SCN3B-206ENST00000530277 DBNLQ9UJU6 430 aaKnown RBP14.38□□□□□ -0.11
SCN3B-206ENST00000530277 ZDHHC9Q9Y397 364 aa14.38□□□□□ -0.11
SCN3B-206ENST00000530277 HECW2Q9P2P5 1572 aa14.38□□□□□ -0.11
SCN3B-206ENST00000530277 TTC6Q86TZ1 520 aa14.38□□□□□ -0.11
SCN3B-206ENST00000530277 SIRT1Q96EB6 747 aa14.38□□□□□ -0.11
SCN3B-206ENST00000530277 SHROOM2Q13796 1616 aa14.38□□□□□ -0.11
SCN3B-206ENST00000530277 ALG1Q9BT22 464 aa14.38□□□□□ -0.11
SCN3B-206ENST00000530277 PPRC1Q5VV67 1664 aaKnown RBP14.37□□□□□ -0.11
SCN3B-206ENST00000530277 MCM5P33992 734 aa14.37□□□□□ -0.11
SCN3B-206ENST00000530277 MAP3K12Q12852 859 aa14.37□□□□□ -0.11
SCN3B-206ENST00000530277 ZSCAN25Q6NSZ9 544 aa14.37□□□□□ -0.11
SCN3B-206ENST00000530277 DHX32Q7L7V1 743 aaKnown RBP14.37□□□□□ -0.11
SCN3B-206ENST00000530277 AMOTL1Q8IY63 956 aa14.37□□□□□ -0.11
SCN3B-206ENST00000530277 CNNM3Q8NE01 707 aa14.37□□□□□ -0.11
SCN3B-206ENST00000530277 NCOA7Q8NI08 942 aa14.37□□□□□ -0.11
SCN3B-206ENST00000530277 PRDM1O75626 825 aa14.37□□□□□ -0.11
SCN3B-206ENST00000530277 HMGB1P09429 215 aaKnown RBP14.37□□□□□ -0.11
SCN3B-206ENST00000530277 PTPN21Q16825 1174 aa14.37□□□□□ -0.11
SCN3B-206ENST00000530277 CMTR1Q8N1G2 835 aaKnown RBP14.37□□□□□ -0.11
SCN3B-206ENST00000530277 PHKBQ93100 1093 aa14.37□□□□□ -0.11
SCN3B-206ENST00000530277 MTMR6Q9Y217 621 aa14.37□□□□□ -0.11
SCN3B-206ENST00000530277 QRICH2Q9H0J4 1663 aa14.37□□□□□ -0.11
SCN3B-206ENST00000530277 NPHP3Q7Z494 1330 aa14.37□□□□□ -0.11
SCN3B-206ENST00000530277 B4E1Z4 1266 aa14.37□□□□□ -0.11
SCN3B-206ENST00000530277 OFD1O75665 1012 aa14.37□□□□□ -0.11
SCN3B-206ENST00000530277 SASH1O94885 1247 aa14.37□□□□□ -0.11
SCN3B-206ENST00000530277 NAP1L1P55209 391 aaKnown RBP14.37□□□□□ -0.11
SCN3B-206ENST00000530277 LRMPQ12912 555 aa14.37□□□□□ -0.11
SCN3B-206ENST00000530277 TMX4Q9H1E5 349 aaPredicted RBP14.37□□□□□ -0.11
SCN3B-206ENST00000530277 A2ML1A8K2U0 1454 aa14.36□□□□□ -0.11
SCN3B-206ENST00000530277 ERICH4A6NGS2 130 aa14.36□□□□□ -0.11
SCN3B-206ENST00000530277 URI1O94763 535 aaPredicted RBP14.36□□□□□ -0.11
SCN3B-206ENST00000530277 AFMP43652 599 aa14.36□□□□□ -0.11
SCN3B-206ENST00000530277 PPP4R3BQ5MIZ7 849 aa14.36□□□□□ -0.11
SCN3B-206ENST00000530277 BRMS1Q9HCU9 246 aa14.36□□□□□ -0.11
SCN3B-206ENST00000530277 GPHNQ9NQX3 736 aaPredicted RBP14.36□□□□□ -0.11
SCN3B-206ENST00000530277 PNPLA6Q8IY17 1366 aa14.36□□□□□ -0.11
SCN3B-206ENST00000530277 SNAP23O00161 211 aa14.36□□□□□ -0.11
SCN3B-206ENST00000530277 ZAP70P43403 619 aa14.36□□□□□ -0.11
SCN3B-206ENST00000530277 SKILP12757 684 aa14.35□□□□□ -0.11
SCN3B-206ENST00000530277 IKQ13123 557 aaPredicted RBP14.35□□□□□ -0.11
SCN3B-206ENST00000530277 PI4K2BQ8TCG2 481 aa14.35□□□□□ -0.11
SCN3B-206ENST00000530277 ZHX3Q9H4I2 956 aa14.35□□□□□ -0.11
SCN3B-206ENST00000530277 BTG4Q9NY30 223 aa14.35□□□□□ -0.11
SCN3B-206ENST00000530277 PTCH1Q13635 1447 aa14.35□□□□□ -0.11
SCN3B-206ENST00000530277 IRS4O14654 1257 aaPredicted RBP14.35□□□□□ -0.11
SCN3B-206ENST00000530277 RNF113AO15541 343 aaKnown RBP14.35□□□□□ -0.11
SCN3B-206ENST00000530277 NR1I2O75469 434 aa14.35□□□□□ -0.11
SCN3B-206ENST00000530277 SSBP05455 408 aaKnown RBP eCLIP14.35□□□□□ -0.11
SCN3B-206ENST00000530277 IL2RBP14784 551 aa14.35□□□□□ -0.11
SCN3B-206ENST00000530277 KCNQ4P56696 695 aa14.35□□□□□ -0.11
SCN3B-206ENST00000530277 NOC3LQ8WTT2 800 aaKnown RBP14.35□□□□□ -0.11
SCN3B-206ENST00000530277 ANKRD20A12PQ8NF67 263 aa14.35□□□□□ -0.11
SCN3B-206ENST00000530277 LEO1Q8WVC0 666 aaPredicted RBP14.35□□□□□ -0.11
SCN3B-206ENST00000530277 VAT1LQ9HCJ6 419 aa14.35□□□□□ -0.11
SCN3B-206ENST00000530277 GJB4Q9NTQ9 266 aa14.35□□□□□ -0.11
SCN3B-206ENST00000530277 GNL3LQ9NVN8 582 aaKnown RBP14.35□□□□□ -0.11
SCN3B-206ENST00000530277 NOL7Q9UMY1 257 aaKnown RBP14.35□□□□□ -0.11
SCN3B-206ENST00000530277 ATP7BP35670 1465 aa14.35□□□□□ -0.11
SCN3B-206ENST00000530277 EYA2O00167 538 aa14.34□□□□□ -0.11
SCN3B-206ENST00000530277 CDKL5O76039 1030 aa14.34□□□□□ -0.11
SCN3B-206ENST00000530277 USP5P45974 858 aa14.34□□□□□ -0.11
SCN3B-206ENST00000530277 MEX3CQ5U5Q3 659 aaKnown RBP14.34□□□□□ -0.11
SCN3B-206ENST00000530277 XAGE2Q96GT9 111 aa14.34□□□□□ -0.11
SCN3B-206ENST00000530277 IPO7O95373 1038 aaKnown RBP14.34□□□□□ -0.11
SCN3B-206ENST00000530277 MAGEB6Q8N7X4 407 aa14.34□□□□□ -0.11
SCN3B-206ENST00000530277 OSBPL3Q9H4L5 887 aa14.34□□□□□ -0.11
SCN3B-206ENST00000530277 PHKG2P15735 406 aa14.34□□□□□ -0.11
SCN3B-206ENST00000530277 ADORA1P30542 326 aa14.34□□□□□ -0.11
SCN3B-206ENST00000530277 ARHGEF25Q86VW2 580 aa14.34□□□□□ -0.11
SCN3B-206ENST00000530277 PDCL3Q9H2J4 239 aa14.34□□□□□ -0.11
SCN3B-206ENST00000530277 ZNF219Q9P2Y4 722 aaPredicted RBP14.34□□□□□ -0.11
SCN3B-206ENST00000530277 ADGRB3O60242 1522 aa14.34□□□□□ -0.11
SCN3B-206ENST00000530277 ZBTB43O43298 467 aa14.33□□□□□ -0.11
SCN3B-206ENST00000530277 STX1AQ16623 288 aa14.33□□□□□ -0.11
SCN3B-206ENST00000530277 SYNE4Q8N205 404 aa14.33□□□□□ -0.11
SCN3B-206ENST00000530277 STAP2Q9UGK3 403 aa14.33□□□□□ -0.11
SCN3B-206ENST00000530277 ALKQ9UM73 1620 aa14.33□□□□□ -0.12
SCN3B-206ENST00000530277 STX17P56962 302 aa14.33□□□□□ -0.12
SCN3B-206ENST00000530277 MFSD6Q6ZSS7 791 aa14.33□□□□□ -0.12
SCN3B-206ENST00000530277 NIP7Q9Y221 180 aaKnown RBP eCLIP14.33□□□□□ -0.12
SCN3B-206ENST00000530277 SLC4A4Q9Y6R1 1079 aa14.33□□□□□ -0.12
SCN3B-206ENST00000530277 SLC5A1P13866 664 aa14.33□□□□□ -0.12
SCN3B-206ENST00000530277 ITGA6P23229 1130 aa14.33□□□□□ -0.12
SCN3B-206ENST00000530277 SYKP43405 635 aa14.33□□□□□ -0.12
SCN3B-206ENST00000530277 DZIP3Q86Y13 1208 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms