RNA–Protein interactions for RNA: ENST00000529993.5

LRP5-206, Transcript of LDL receptor related protein 5, humanhuman

TSL 1 (best)

Gene LRP5, Length 5,103 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-206ENST00000529993 CCDC102AQ96A19 550 aa17.27■□□□□ 0.35
LRP5-206ENST00000529993 YEATS2Q9ULM3 1422 aa17.27■□□□□ 0.35
LRP5-206ENST00000529993 CAVIN2O95810 425 aa17.27■□□□□ 0.35
LRP5-206ENST00000529993 HSPA2P54652 639 aa17.27■□□□□ 0.35
LRP5-206ENST00000529993 KCNG4Q8TDN1 519 aa17.27■□□□□ 0.35
LRP5-206ENST00000529993 NUP88Q99567 741 aaPredicted RBP17.27■□□□□ 0.35
LRP5-206ENST00000529993 USP44Q9H0E7 712 aa17.27■□□□□ 0.35
LRP5-206ENST00000529993 PLEKHG3A1L390 1219 aa17.26■□□□□ 0.35
LRP5-206ENST00000529993 ENOX2Q16206 610 aaKnown RBP17.26■□□□□ 0.35
LRP5-206ENST00000529993 CCDC152Q4G0S7 254 aa17.26■□□□□ 0.35
LRP5-206ENST00000529993 LUZP1Q86V48 1076 aa17.26■□□□□ 0.35
LRP5-206ENST00000529993 SKILP12757 684 aa17.26■□□□□ 0.35
LRP5-206ENST00000529993 AFMP43652 599 aa17.26■□□□□ 0.35
LRP5-206ENST00000529993 SLC27A2O14975 620 aa17.26■□□□□ 0.35
LRP5-206ENST00000529993 KIF5CO60282 957 aa17.26■□□□□ 0.35
LRP5-206ENST00000529993 SNW1Q13573 536 aaKnown RBP17.26■□□□□ 0.35
LRP5-206ENST00000529993 CRACR2BQ8N4Y2 399 aaPredicted RBP17.26■□□□□ 0.35
LRP5-206ENST00000529993 SIRT1Q96EB6 747 aa17.26■□□□□ 0.35
LRP5-206ENST00000529993 ZNF594Q96JF6 807 aaPredicted RBP17.26■□□□□ 0.35
LRP5-206ENST00000529993 SEPT11Q9NVA2 429 aaKnown RBP17.26■□□□□ 0.35
LRP5-206ENST00000529993 STX8Q9UNK0 236 aa17.26■□□□□ 0.35
LRP5-206ENST00000529993 RTL1A6NKG5 1358 aa17.26■□□□□ 0.35
LRP5-206ENST00000529993 C6orf229H3BNL8 230 aa17.26■□□□□ 0.35
LRP5-206ENST00000529993 CASQ1P31415 396 aa17.26■□□□□ 0.35
LRP5-206ENST00000529993 CWC15Q9P013 229 aaKnown RBP17.26■□□□□ 0.35
LRP5-206ENST00000529993 SPDYE4A6NLX3 237 aa17.25■□□□□ 0.35
LRP5-206ENST00000529993 ATP6V1AP38606 617 aa17.25■□□□□ 0.35
LRP5-206ENST00000529993 EIF4A1P60842 406 aaKnown RBP17.25■□□□□ 0.35
LRP5-206ENST00000529993 MIGA1Q8NAN2 632 aa17.25■□□□□ 0.35
LRP5-206ENST00000529993 PDCL3Q9H2J4 239 aa17.25■□□□□ 0.35
LRP5-206ENST00000529993 LMOD1P29536 600 aaPredicted RBP17.25■□□□□ 0.35
LRP5-206ENST00000529993 RTN1Q16799 776 aa17.25■□□□□ 0.35
LRP5-206ENST00000529993 CCDC96Q2M329 555 aa17.25■□□□□ 0.35
LRP5-206ENST00000529993 SPTLC2O15270 562 aa17.25■□□□□ 0.35
LRP5-206ENST00000529993 TNNI3KQ59H18 835 aa17.25■□□□□ 0.35
LRP5-206ENST00000529993 EDC3Q96F86 508 aaKnown RBP17.25■□□□□ 0.35
LRP5-206ENST00000529993 CENPHQ9H3R5 247 aa17.25■□□□□ 0.35
LRP5-206ENST00000529993 PRM3Q9NNZ6 103 aa17.25■□□□□ 0.35
LRP5-206ENST00000529993 NIP7Q9Y221 180 aaKnown RBP eCLIP17.25■□□□□ 0.351e-8■■□□□ 13
LRP5-206ENST00000529993 FPGT-TNNI3KV9GXZ4 949 aa17.25■□□□□ 0.35
LRP5-206ENST00000529993 GADD45BO75293 160 aaPredicted RBP17.25■□□□□ 0.35
LRP5-206ENST00000529993 CEP135Q66GS9 1140 aa17.25■□□□□ 0.35
LRP5-206ENST00000529993 DDX17Q92841 729 aaKnown RBP17.25■□□□□ 0.35
LRP5-206ENST00000529993 CHAMP1Q96JM3 812 aa17.25■□□□□ 0.35
LRP5-206ENST00000529993 METTL22Q9BUU2 404 aaPredicted RBP17.25■□□□□ 0.35
LRP5-206ENST00000529993 RAD50Q92878 1312 aa17.24■□□□□ 0.35
LRP5-206ENST00000529993 IRS4O14654 1257 aaPredicted RBP17.24■□□□□ 0.35
LRP5-206ENST00000529993 UBASH3AP57075 661 aa17.24■□□□□ 0.35
LRP5-206ENST00000529993 PKP1Q13835 747 aa17.24■□□□□ 0.35
LRP5-206ENST00000529993 DNA2P51530 1060 aa17.24■□□□□ 0.35
LRP5-206ENST00000529993 DZIP3Q86Y13 1208 aaKnown RBP17.24■□□□□ 0.35
LRP5-206ENST00000529993 ZSWIM4Q9H7M6 989 aa17.24■□□□□ 0.35
LRP5-206ENST00000529993 ZNF219Q9P2Y4 722 aaPredicted RBP17.24■□□□□ 0.35
LRP5-206ENST00000529993 A0A1B0GUL7 405 aa17.24■□□□□ 0.35
LRP5-206ENST00000529993 PTGS1P23219 599 aa17.24■□□□□ 0.35
LRP5-206ENST00000529993 PPP4R3BQ5MIZ7 849 aa17.24■□□□□ 0.35
LRP5-206ENST00000529993 RPGRQ92834 1020 aaKnown RBP17.24■□□□□ 0.35
LRP5-206ENST00000529993 PALD1Q9ULE6 856 aa17.24■□□□□ 0.35
LRP5-206ENST00000529993 EIF3JO75822 258 aaKnown RBP17.24■□□□□ 0.35
LRP5-206ENST00000529993 A1BGP04217 495 aa17.24■□□□□ 0.35
LRP5-206ENST00000529993 IDEP14735 1019 aa17.24■□□□□ 0.35
LRP5-206ENST00000529993 KAT14Q9H8E8 782 aa17.24■□□□□ 0.35
LRP5-206ENST00000529993 NCOA5Q9HCD5 579 aaKnown RBP17.24■□□□□ 0.35
LRP5-206ENST00000529993 H0YHG0 523 aa17.23■□□□□ 0.35
LRP5-206ENST00000529993 RPS6KB1P23443 525 aa17.23■□□□□ 0.35
LRP5-206ENST00000529993 BABAM1Q9NWV8 329 aa17.23■□□□□ 0.35
LRP5-206ENST00000529993 UBA7P41226 1012 aa17.23■□□□□ 0.35
LRP5-206ENST00000529993 PDE4BQ07343 736 aa17.23■□□□□ 0.35
LRP5-206ENST00000529993 ZNF496Q96IT1 587 aaPredicted RBP17.23■□□□□ 0.35
LRP5-206ENST00000529993 LMBRD1Q9NUN5 540 aa17.23■□□□□ 0.35
LRP5-206ENST00000529993 HOXB7P09629 217 aa17.23■□□□□ 0.35
LRP5-206ENST00000529993 PRKCSHP14314 528 aaPredicted RBP17.23■□□□□ 0.35
LRP5-206ENST00000529993 KRT23Q9C075 422 aa17.23■□□□□ 0.35
LRP5-206ENST00000529993 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.23■□□□□ 0.35
LRP5-206ENST00000529993 KIAA0232Q92628 1395 aa17.23■□□□□ 0.35
LRP5-206ENST00000529993 TTC37Q6PGP7 1564 aa17.23■□□□□ 0.35
LRP5-206ENST00000529993 ANKRD18AQ8IVF6 992 aa17.23■□□□□ 0.35
LRP5-206ENST00000529993 ZNF397Q8NF99 534 aaPredicted RBP17.23■□□□□ 0.35
LRP5-206ENST00000529993 DYNC1I1O14576 645 aa17.22■□□□□ 0.35
LRP5-206ENST00000529993 NBPF5PQ86XG9 351 aaPredicted RBP17.22■□□□□ 0.35
LRP5-206ENST00000529993 ESR2Q92731 530 aa17.22■□□□□ 0.35
LRP5-206ENST00000529993 UBA5Q9GZZ9 404 aa17.22■□□□□ 0.35
LRP5-206ENST00000529993 TMEM132AQ24JP5 1023 aa17.22■□□□□ 0.35
LRP5-206ENST00000529993 PRIMPOLQ96LW4 560 aa17.22■□□□□ 0.35
LRP5-206ENST00000529993 KIF5BP33176 963 aa17.22■□□□□ 0.35
LRP5-206ENST00000529993 FKBP15Q5T1M5 1219 aa17.22■□□□□ 0.35
LRP5-206ENST00000529993 IFIT1BQ5T764 474 aaKnown RBP17.22■□□□□ 0.35
LRP5-206ENST00000529993 MAGEB6Q8N7X4 407 aa17.22■□□□□ 0.35
LRP5-206ENST00000529993 PLXNC1O60486 1568 aa17.22■□□□□ 0.35
LRP5-206ENST00000529993 GNG11P61952 73 aa17.21■□□□□ 0.35
LRP5-206ENST00000529993 SPA17Q15506 151 aa17.21■□□□□ 0.35
LRP5-206ENST00000529993 METP08581 1390 aa17.21■□□□□ 0.35
LRP5-206ENST00000529993 TMEM2Q9UHN6 1383 aa17.21■□□□□ 0.35
LRP5-206ENST00000529993 MYO5CQ9NQX4 1742 aa17.21■□□□□ 0.35
LRP5-206ENST00000529993 EYA2O00167 538 aa17.21■□□□□ 0.35
LRP5-206ENST00000529993 CACNA2D4Q7Z3S7 1137 aa17.21■□□□□ 0.35
LRP5-206ENST00000529993 A0A1B0GVL5 298 aa17.21■□□□□ 0.35
LRP5-206ENST00000529993 CCDC148Q8NFR7 591 aa17.21■□□□□ 0.35
LRP5-206ENST00000529993 HSPA4P34932 840 aa17.21■□□□□ 0.34
LRP5-206ENST00000529993 GCKRQ14397 625 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms