RNA–Protein interactions for RNA: ENST00000526308.2

PCDHB18P-202, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 3,197 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-202ENST00000526308 CDC25BP30305 580 aa16.1■□□□□ 0.17
PCDHB18P-202ENST00000526308 NPHP4O75161 1426 aaPredicted RBP16.1■□□□□ 0.17
PCDHB18P-202ENST00000526308 KRT222Q8N1A0 295 aa16.1■□□□□ 0.17
PCDHB18P-202ENST00000526308 ZNF397Q8NF99 534 aaPredicted RBP16.1■□□□□ 0.17
PCDHB18P-202ENST00000526308 KAZALD1Q96I82 304 aa16.1■□□□□ 0.17
PCDHB18P-202ENST00000526308 NAT10Q9H0A0 1025 aaKnown RBP16.1■□□□□ 0.17
PCDHB18P-202ENST00000526308 GOLPH3LQ9H4A5 285 aa16.1■□□□□ 0.17
PCDHB18P-202ENST00000526308 PLEKHG1Q9ULL1 1385 aa16.09■□□□□ 0.17
PCDHB18P-202ENST00000526308 APOBRQ0VD83 1088 aa16.09■□□□□ 0.17
PCDHB18P-202ENST00000526308 IP6K1Q92551 441 aa16.09■□□□□ 0.17
PCDHB18P-202ENST00000526308 ZNF396Q96N95 335 aaPredicted RBP16.09■□□□□ 0.17
PCDHB18P-202ENST00000526308 U3KPZ7 1027 aaPredicted RBP16.09■□□□□ 0.17
PCDHB18P-202ENST00000526308 MED23Q9ULK4 1368 aa16.09■□□□□ 0.17
PCDHB18P-202ENST00000526308 PTPDC1A2A3K4 754 aa16.09■□□□□ 0.17
PCDHB18P-202ENST00000526308 USP28Q96RU2 1077 aa16.09■□□□□ 0.17
PCDHB18P-202ENST00000526308 NCOA5Q9HCD5 579 aaKnown RBP16.09■□□□□ 0.17
PCDHB18P-202ENST00000526308 LRRC37A3O60309 1634 aa16.08■□□□□ 0.17
PCDHB18P-202ENST00000526308 RNMTO43148 476 aaKnown RBP16.08■□□□□ 0.17
PCDHB18P-202ENST00000526308 CYP21A2P08686 494 aa16.08■□□□□ 0.17
PCDHB18P-202ENST00000526308 MYD88Q99836 296 aa16.08■□□□□ 0.17
PCDHB18P-202ENST00000526308 KMT5BQ4FZB7 885 aa16.08■□□□□ 0.16
PCDHB18P-202ENST00000526308 TOPAZ1Q8N9V7 1692 aa16.08■□□□□ 0.16
PCDHB18P-202ENST00000526308 SARM1Q6SZW1 724 aa16.08■□□□□ 0.16
PCDHB18P-202ENST00000526308 CHST3Q7LGC8 479 aa16.08■□□□□ 0.16
PCDHB18P-202ENST00000526308 ALDH8A1Q9H2A2 487 aaPredicted RBP16.08■□□□□ 0.16
PCDHB18P-202ENST00000526308 GABPB1Q06547 395 aaPredicted RBP16.07■□□□□ 0.16
PCDHB18P-202ENST00000526308 TFCP2Q12800 502 aa16.07■□□□□ 0.16
PCDHB18P-202ENST00000526308 GORABQ5T7V8 394 aa16.07■□□□□ 0.16
PCDHB18P-202ENST00000526308 CCAR2Q8N163 923 aaKnown RBP16.07■□□□□ 0.16
PCDHB18P-202ENST00000526308 ERICH4A6NGS2 130 aa16.07■□□□□ 0.16
PCDHB18P-202ENST00000526308 NRDCO43847 1150 aa16.07■□□□□ 0.16
PCDHB18P-202ENST00000526308 FAM160A1Q05DH4 1040 aa16.07■□□□□ 0.16
PCDHB18P-202ENST00000526308 SNW1Q13573 536 aaKnown RBP16.07■□□□□ 0.16
PCDHB18P-202ENST00000526308 MCMDC2Q4G0Z9 681 aa16.07■□□□□ 0.16
PCDHB18P-202ENST00000526308 HOMER1Q86YM7 354 aa16.07■□□□□ 0.16
PCDHB18P-202ENST00000526308 NEUROD6Q96NK8 337 aa16.07■□□□□ 0.16
PCDHB18P-202ENST00000526308 DBNLQ9UJU6 430 aaKnown RBP16.07■□□□□ 0.16
PCDHB18P-202ENST00000526308 DIP2BQ9P265 1576 aa16.07■□□□□ 0.16
PCDHB18P-202ENST00000526308 BIN1O00499 593 aa16.06■□□□□ 0.16
PCDHB18P-202ENST00000526308 SLU7O95391 586 aaKnown RBP16.06■□□□□ 0.16
PCDHB18P-202ENST00000526308 PSME1Q06323 249 aa16.06■□□□□ 0.16
PCDHB18P-202ENST00000526308 A0A1B0GVL5 298 aa16.06■□□□□ 0.16
PCDHB18P-202ENST00000526308 SLC39A6Q13433 755 aa16.06■□□□□ 0.16
PCDHB18P-202ENST00000526308 TSGA10IPQ3SY00 556 aa16.06■□□□□ 0.16
PCDHB18P-202ENST00000526308 FBXO38Q6PIJ6 1188 aa16.06■□□□□ 0.16
PCDHB18P-202ENST00000526308 TMC6Q7Z403 805 aa16.06■□□□□ 0.16
PCDHB18P-202ENST00000526308 ERO1AQ96HE7 468 aa16.06■□□□□ 0.16
PCDHB18P-202ENST00000526308 PIP4K2AP48426 406 aaPredicted RBP16.06■□□□□ 0.16
PCDHB18P-202ENST00000526308 RBM6P78332 1123 aaKnown RBP16.06■□□□□ 0.16
PCDHB18P-202ENST00000526308 EPHA10Q5JZY3 1008 aa16.06■□□□□ 0.16
PCDHB18P-202ENST00000526308 DHX40Q8IX18 779 aaKnown RBP16.06■□□□□ 0.16
PCDHB18P-202ENST00000526308 RCOR1Q9UKL0 485 aa16.06■□□□□ 0.16
PCDHB18P-202ENST00000526308 ADGRL3Q9HAR2 1447 aa16.05■□□□□ 0.16
PCDHB18P-202ENST00000526308 KCNA6P17658 529 aa16.05■□□□□ 0.16
PCDHB18P-202ENST00000526308 NSUN7Q8NE18 718 aaKnown RBP16.05■□□□□ 0.16
PCDHB18P-202ENST00000526308 DBNDD2Q9BQY9 259 aa16.05■□□□□ 0.16
PCDHB18P-202ENST00000526308 SNRKQ9NRH2 765 aa16.05■□□□□ 0.16
PCDHB18P-202ENST00000526308 MORC2Q9Y6X9 1032 aaPredicted RBP16.05■□□□□ 0.16
PCDHB18P-202ENST00000526308 IGKV5-2P06315 115 aa16.05■□□□□ 0.16
PCDHB18P-202ENST00000526308 GSDMDP57764 484 aa16.05■□□□□ 0.16
PCDHB18P-202ENST00000526308 CCZ1BP86790 482 aa16.05■□□□□ 0.16
PCDHB18P-202ENST00000526308 CCZ1P86791 482 aaPredicted RBP16.05■□□□□ 0.16
PCDHB18P-202ENST00000526308 TNNI3KQ59H18 835 aa16.05■□□□□ 0.16
PCDHB18P-202ENST00000526308 DDX21Q9NR30 783 aaKnown RBP eCLIP16.05■□□□□ 0.16
PCDHB18P-202ENST00000526308 FPGT-TNNI3KV9GXZ4 949 aa16.05■□□□□ 0.16
PCDHB18P-202ENST00000526308 PIK3C2AO00443 1686 aa16.05■□□□□ 0.16
PCDHB18P-202ENST00000526308 NWD1Q149M9 1564 aa16.04■□□□□ 0.16
PCDHB18P-202ENST00000526308 STK38Q15208 465 aa16.04■□□□□ 0.16
PCDHB18P-202ENST00000526308 SLFNL1Q499Z3 407 aa16.04■□□□□ 0.16
PCDHB18P-202ENST00000526308 AMOTQ4VCS5 1084 aa16.04■□□□□ 0.16
PCDHB18P-202ENST00000526308 NYAP1Q6ZVC0 841 aa16.04■□□□□ 0.16
PCDHB18P-202ENST00000526308 DHX32Q7L7V1 743 aaKnown RBP16.04■□□□□ 0.16
PCDHB18P-202ENST00000526308 XAGE3Q8WTP9 111 aa16.04■□□□□ 0.16
PCDHB18P-202ENST00000526308 PHF8Q9UPP1 1060 aa16.04■□□□□ 0.16
PCDHB18P-202ENST00000526308 ATP5JP18859 108 aa16.04■□□□□ 0.16
PCDHB18P-202ENST00000526308 SFPQP23246 707 aaKnown RBP eCLIP16.04■□□□□ 0.16
PCDHB18P-202ENST00000526308 NAA16Q6N069 864 aaPredicted RBP16.04■□□□□ 0.16
PCDHB18P-202ENST00000526308 SYT10Q6XYQ8 523 aa16.04■□□□□ 0.16
PCDHB18P-202ENST00000526308 COPS6Q7L5N1 327 aa16.04■□□□□ 0.16
PCDHB18P-202ENST00000526308 UBE3BQ7Z3V4 1068 aa16.04■□□□□ 0.16
PCDHB18P-202ENST00000526308 MRPS27Q92552 414 aaKnown RBP16.04■□□□□ 0.16
PCDHB18P-202ENST00000526308 TBX22Q9Y458 520 aa16.04■□□□□ 0.16
PCDHB18P-202ENST00000526308 PFKFB2O60825 505 aa16.03■□□□□ 0.16
PCDHB18P-202ENST00000526308 POLR3DP05423 398 aaPredicted RBP16.03■□□□□ 0.16
PCDHB18P-202ENST00000526308 TPM4P67936 248 aa16.03■□□□□ 0.16
PCDHB18P-202ENST00000526308 USPL1Q5W0Q7 1092 aa16.03■□□□□ 0.16
PCDHB18P-202ENST00000526308 ISM2Q6H9L7 571 aa16.03■□□□□ 0.16
PCDHB18P-202ENST00000526308 LLPHQ9BRT6 129 aaKnown RBP16.03■□□□□ 0.16
PCDHB18P-202ENST00000526308 IFNKQ9P0W0 207 aa16.03■□□□□ 0.16
PCDHB18P-202ENST00000526308 GOLIM4O00461 696 aa16.03■□□□□ 0.16
PCDHB18P-202ENST00000526308 NEURL1BA8MQ27 555 aa16.03■□□□□ 0.16
PCDHB18P-202ENST00000526308 HMGB1P09429 215 aaKnown RBP16.03■□□□□ 0.16
PCDHB18P-202ENST00000526308 ADD1P35611 737 aaKnown RBP16.03■□□□□ 0.16
PCDHB18P-202ENST00000526308 GCKRQ14397 625 aa16.03■□□□□ 0.16
PCDHB18P-202ENST00000526308 ERCC6LQ2NKX8 1250 aa16.03■□□□□ 0.16
PCDHB18P-202ENST00000526308 OTUD7BQ6GQQ9 843 aa16.03■□□□□ 0.16
PCDHB18P-202ENST00000526308 STOX1Q6ZVD7 989 aa16.03■□□□□ 0.16
PCDHB18P-202ENST00000526308 COL15A1P39059 1388 aa16.03■□□□□ 0.16
PCDHB18P-202ENST00000526308 KIF2AO00139 706 aaPredicted RBP16.02■□□□□ 0.16
PCDHB18P-202ENST00000526308 DIP2AQ14689 1571 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms