RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 GPR108Q9NPR9 543 aa26.24■■□□□ 1.79
R3HCC1-208ENST00000522012 NRXN2Q9P2S2 1712 aa26.24■■□□□ 1.79
R3HCC1-208ENST00000522012 HELBQ8NG08 1087 aaPredicted RBP26.24■■□□□ 1.79
R3HCC1-208ENST00000522012 AKAP2Q9Y2D5 859 aa26.24■■□□□ 1.79
R3HCC1-208ENST00000522012 SALL3Q9BXA9 1300 aa26.24■■□□□ 1.79
R3HCC1-208ENST00000522012 TSHZ3Q63HK5 1081 aa26.23■■□□□ 1.79
R3HCC1-208ENST00000522012 NEUROD6Q96NK8 337 aa26.23■■□□□ 1.79
R3HCC1-208ENST00000522012 POLD1P28340 1107 aa26.22■■□□□ 1.79
R3HCC1-208ENST00000522012 HOXA10P31260 410 aaPredicted RBP26.22■■□□□ 1.79
R3HCC1-208ENST00000522012 TLR7Q9NYK1 1049 aaKnown RBP26.22■■□□□ 1.79
R3HCC1-208ENST00000522012 STAP2Q9UGK3 403 aa26.22■■□□□ 1.79
R3HCC1-208ENST00000522012 PDE8BO95263 885 aa26.21■■□□□ 1.79
R3HCC1-208ENST00000522012 TIMM10P62072 90 aa26.21■■□□□ 1.79
R3HCC1-208ENST00000522012 CHRNDQ07001 517 aa26.21■■□□□ 1.79
R3HCC1-208ENST00000522012 GPATCH3Q96I76 525 aa26.21■■□□□ 1.79
R3HCC1-208ENST00000522012 CRAMP1Q96RY5 1269 aa26.21■■□□□ 1.79
R3HCC1-208ENST00000522012 OSBPL3Q9H4L5 887 aa26.21■■□□□ 1.79
R3HCC1-208ENST00000522012 COL4A1P02462 1669 aa26.21■■□□□ 1.79
R3HCC1-208ENST00000522012 A0A1B0GUL7 405 aa26.2■■□□□ 1.79
R3HCC1-208ENST00000522012 SRGNP10124 158 aa26.2■■□□□ 1.79
R3HCC1-208ENST00000522012 NPR1P16066 1061 aa26.2■■□□□ 1.79
R3HCC1-208ENST00000522012 C2CD5Q86YS7 1000 aa26.2■■□□□ 1.79
R3HCC1-208ENST00000522012 VGLL2Q8N8G2 317 aa26.2■■□□□ 1.79
R3HCC1-208ENST00000522012 MINPP1Q9UNW1 487 aa26.2■■□□□ 1.79
R3HCC1-208ENST00000522012 TAF5LO75529 589 aa26.19■■□□□ 1.78
R3HCC1-208ENST00000522012 ATP2B3Q16720 1220 aa26.19■■□□□ 1.78
R3HCC1-208ENST00000522012 DBNLQ9UJU6 430 aaKnown RBP26.19■■□□□ 1.78
R3HCC1-208ENST00000522012 H0YIN7 160 aa26.19■■□□□ 1.78
R3HCC1-208ENST00000522012 TTC22Q5TAA0 569 aa26.19■■□□□ 1.78
R3HCC1-208ENST00000522012 DBNDD2Q9BQY9 259 aa26.19■■□□□ 1.78
R3HCC1-208ENST00000522012 ECHDC1Q9NTX5 307 aa26.19■■□□□ 1.78
R3HCC1-208ENST00000522012 MASTLQ96GX5 879 aa26.18■■□□□ 1.78
R3HCC1-208ENST00000522012 ZNF609O15014 1411 aa26.17■■□□□ 1.78
R3HCC1-208ENST00000522012 AOX1Q06278 1338 aa26.17■■□□□ 1.78
R3HCC1-208ENST00000522012 TTC41PQ6P2S7 1318 aa26.17■■□□□ 1.78
R3HCC1-208ENST00000522012 BBOX1O75936 387 aa26.17■■□□□ 1.78
R3HCC1-208ENST00000522012 PUM3Q15397 648 aaKnown RBP26.17■■□□□ 1.78
R3HCC1-208ENST00000522012 ZNF622Q969S3 477 aaKnown RBP eCLIP26.17■■□□□ 1.78
R3HCC1-208ENST00000522012 CASZ1Q86V15 1759 aa26.17■■□□□ 1.78
R3HCC1-208ENST00000522012 ERC2O15083 957 aa26.15■■□□□ 1.78
R3HCC1-208ENST00000522012 GSPT1P15170 499 aaKnown RBP26.15■■□□□ 1.78
R3HCC1-208ENST00000522012 ALDH1B1P30837 517 aa26.15■■□□□ 1.78
R3HCC1-208ENST00000522012 BMP2KLQ5H9B9 411 aa26.15■■□□□ 1.78
R3HCC1-208ENST00000522012 GORABQ5T7V8 394 aa26.15■■□□□ 1.78
R3HCC1-208ENST00000522012 ANKRD2Q9GZV1 360 aa26.15■■□□□ 1.78
R3HCC1-208ENST00000522012 CHRNA5P30532 468 aa26.14■■□□□ 1.78
R3HCC1-208ENST00000522012 PI4K2BQ8TCG2 481 aa26.14■■□□□ 1.78
R3HCC1-208ENST00000522012 LPIN2Q92539 896 aa26.14■■□□□ 1.78
R3HCC1-208ENST00000522012 XAGE2Q96GT9 111 aa26.14■■□□□ 1.78
R3HCC1-208ENST00000522012 C10orf71Q711Q0 1435 aa26.14■■□□□ 1.77
R3HCC1-208ENST00000522012 SNAP23O00161 211 aa26.14■■□□□ 1.77
R3HCC1-208ENST00000522012 ADORA1P30542 326 aa26.14■■□□□ 1.77
R3HCC1-208ENST00000522012 ANKRD31Q8N7Z5 1873 aa26.13■■□□□ 1.77
R3HCC1-208ENST00000522012 PPEF1O14829 653 aaPredicted RBP26.13■■□□□ 1.77
R3HCC1-208ENST00000522012 GLRX3O76003 335 aaKnown RBP26.13■■□□□ 1.77
R3HCC1-208ENST00000522012 SLC5A1P13866 664 aa26.13■■□□□ 1.77
R3HCC1-208ENST00000522012 FGFR2P21802 821 aa26.13■■□□□ 1.77
R3HCC1-208ENST00000522012 STYK1Q6J9G0 422 aa26.13■■□□□ 1.77
R3HCC1-208ENST00000522012 IFIT1P09914 478 aaKnown RBP26.12■■□□□ 1.77
R3HCC1-208ENST00000522012 KCNJ4P48050 445 aa26.11■■□□□ 1.77
R3HCC1-208ENST00000522012 TMC4Q7Z404 712 aa26.11■■□□□ 1.77
R3HCC1-208ENST00000522012 SLC51AQ86UW1 340 aa26.11■■□□□ 1.77
R3HCC1-208ENST00000522012 ANKIB1Q9P2G1 1089 aa26.11■■□□□ 1.77
R3HCC1-208ENST00000522012 TAF1P21675 1872 aa26.11■■□□□ 1.77
R3HCC1-208ENST00000522012 CCDC158Q5M9N0 1113 aa26.1■■□□□ 1.77
R3HCC1-208ENST00000522012 ATP5JP18859 108 aa26.09■■□□□ 1.77
R3HCC1-208ENST00000522012 SDSP20132 328 aa26.09■■□□□ 1.77
R3HCC1-208ENST00000522012 UBE4AQ14139 1066 aa26.09■■□□□ 1.77
R3HCC1-208ENST00000522012 SGIP1Q9BQI5 828 aa26.09■■□□□ 1.77
R3HCC1-208ENST00000522012 BOLA2Q9H3K6 86 aa26.09■■□□□ 1.77
R3HCC1-208ENST00000522012 SPON1Q9HCB6 807 aa26.09■■□□□ 1.77
R3HCC1-208ENST00000522012 SPEF2Q9C093 1822 aa26.09■■□□□ 1.77
R3HCC1-208ENST00000522012 TRIM6-TRIM34B2RNG4 842 aa26.09■■□□□ 1.77
R3HCC1-208ENST00000522012 MAP4K4O95819 1239 aaPredicted RBP26.09■■□□□ 1.77
R3HCC1-208ENST00000522012 TTC39AQ5SRH9 613 aa26.09■■□□□ 1.77
R3HCC1-208ENST00000522012 SP8Q8IXZ3 490 aa26.09■■□□□ 1.77
R3HCC1-208ENST00000522012 WTIPA6NIX2 430 aaPredicted RBP26.08■■□□□ 1.77
R3HCC1-208ENST00000522012 PTGER2P43116 358 aa26.08■■□□□ 1.77
R3HCC1-208ENST00000522012 GPSM2P81274 684 aa26.08■■□□□ 1.77
R3HCC1-208ENST00000522012 CNKSR1Q969H4 720 aa26.08■■□□□ 1.77
R3HCC1-208ENST00000522012 PPP1R1BQ9UD71 204 aaPredicted RBP26.08■■□□□ 1.77
R3HCC1-208ENST00000522012 ATP6V0A2Q9Y487 856 aa26.08■■□□□ 1.77
R3HCC1-208ENST00000522012 RILPL2Q969X0 211 aa26.07■■□□□ 1.76
R3HCC1-208ENST00000522012 NSFL1CQ9UNZ2 370 aaKnown RBP26.07■■□□□ 1.76
R3HCC1-208ENST00000522012 XDHP47989 1333 aa26.07■■□□□ 1.76
R3HCC1-208ENST00000522012 A0A0G2JLW4 131 aa26.06■■□□□ 1.76
R3HCC1-208ENST00000522012 DPEP1P16444 411 aa26.06■■□□□ 1.76
R3HCC1-208ENST00000522012 TMX4Q9H1E5 349 aaPredicted RBP26.06■■□□□ 1.76
R3HCC1-208ENST00000522012 ZNF804BA4D1E1 1349 aa26.06■■□□□ 1.76
R3HCC1-208ENST00000522012 PRPF40BQ6NWY9 871 aaKnown RBP26.05■■□□□ 1.76
R3HCC1-208ENST00000522012 KLHL34Q8N239 644 aa26.05■■□□□ 1.76
R3HCC1-208ENST00000522012 LEMD3Q9Y2U8 911 aa26.05■■□□□ 1.76
R3HCC1-208ENST00000522012 CCDC102BQ68D86 513 aa26.04■■□□□ 1.76
R3HCC1-208ENST00000522012 COL11A2P13942 1736 aaPredicted RBP26.04■■□□□ 1.76
R3HCC1-208ENST00000522012 PHKA1P46020 1223 aa26.04■■□□□ 1.76
R3HCC1-208ENST00000522012 TGFB2P61812 414 aa26.04■■□□□ 1.76
R3HCC1-208ENST00000522012 C8orf34Q49A92 452 aa26.04■■□□□ 1.76
R3HCC1-208ENST00000522012 DNAJC2Q99543 621 aaKnown RBP26.04■■□□□ 1.76
R3HCC1-208ENST00000522012 BCAMP50895 628 aa26.03■■□□□ 1.76
R3HCC1-208ENST00000522012 CNTROBQ8N137 903 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms