RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 SOX18P35713 384 aa9.09□□□□□ -0.95
CLK4-207ENST00000520909 MAP4K3Q8IVH8 894 aa9.09□□□□□ -0.95
CLK4-207ENST00000520909 HOXD8P13378 290 aaPredicted RBP9.08□□□□□ -0.96
CLK4-207ENST00000520909 BRD2P25440 801 aaKnown RBP9.08□□□□□ -0.96
CLK4-207ENST00000520909 FKBP5Q13451 457 aaPredicted RBP9.08□□□□□ -0.96
CLK4-207ENST00000520909 CACTIN-AS1Q8N1I8 211 aa9.08□□□□□ -0.96
CLK4-207ENST00000520909 PRIMPOLQ96LW4 560 aa9.08□□□□□ -0.96
CLK4-207ENST00000520909 NOVA2Q9UNW9 492 aaKnown RBP9.08□□□□□ -0.96
CLK4-207ENST00000520909 F8W735 103 aaPredicted RBP9.07□□□□□ -0.96
CLK4-207ENST00000520909 SWI5Q1ZZU3 235 aa9.07□□□□□ -0.96
CLK4-207ENST00000520909 NLRP13Q86W25 1043 aa9.07□□□□□ -0.96
CLK4-207ENST00000520909 MUC3BQ9H195 1237 aa9.07□□□□□ -0.96
CLK4-207ENST00000520909 ZNF777Q9ULD5 760 aaPredicted RBP9.07□□□□□ -0.96
CLK4-207ENST00000520909 SETDB1Q15047 1291 aa9.06□□□□□ -0.96
CLK4-207ENST00000520909 ACIN1Q9UKV3 1341 aaKnown RBP9.06□□□□□ -0.96
CLK4-207ENST00000520909 FSTP19883 344 aa9.05□□□□□ -0.96
CLK4-207ENST00000520909 ETFBKMTQ8IXQ9 262 aa9.05□□□□□ -0.96
CLK4-207ENST00000520909 FAM13BQ9NYF5 915 aa9.05□□□□□ -0.96
CLK4-207ENST00000520909 PPME1Q9Y570 386 aa9.05□□□□□ -0.96
CLK4-207ENST00000520909 PRMT3O60678 531 aa9.05□□□□□ -0.96
CLK4-207ENST00000520909 C16orf46Q6P387 395 aa9.05□□□□□ -0.96
CLK4-207ENST00000520909 PIK3R5Q8WYR1 880 aa9.05□□□□□ -0.96
CLK4-207ENST00000520909 PCMTD2Q9NV79 361 aa9.05□□□□□ -0.96
CLK4-207ENST00000520909 TRIM33Q9UPN9 1127 aa9.05□□□□□ -0.96
CLK4-207ENST00000520909 UBAP1LF5GYI3 381 aa9.04□□□□□ -0.96
CLK4-207ENST00000520909 SPACA7Q96KW9 195 aa9.04□□□□□ -0.96
CLK4-207ENST00000520909 SAP130Q9H0E3 1048 aa9.04□□□□□ -0.96
CLK4-207ENST00000520909 PTCD1O75127 700 aaKnown RBP9.03□□□□□ -0.96
CLK4-207ENST00000520909 GLB1P16278 677 aa9.03□□□□□ -0.96
CLK4-207ENST00000520909 OR13H1Q8NG92 308 aa9.03□□□□□ -0.96
CLK4-207ENST00000520909 COL26A1Q96A83 441 aa9.03□□□□□ -0.96
CLK4-207ENST00000520909 FNDC3AQ9Y2H6 1198 aaKnown RBP9.03□□□□□ -0.96
CLK4-207ENST00000520909 TRIP4Q15650 581 aaPredicted RBP9.02□□□□□ -0.97
CLK4-207ENST00000520909 MCTP1Q6DN14 999 aa9.02□□□□□ -0.97
CLK4-207ENST00000520909 AGGF1Q8N302 714 aaeCLIP9.02□□□□□ -0.97
CLK4-207ENST00000520909 HYAL2Q12891 473 aa9.01□□□□□ -0.97
CLK4-207ENST00000520909 OCLNQ16625 522 aa9.01□□□□□ -0.97
CLK4-207ENST00000520909 TTC39BQ5VTQ0 682 aaPredicted RBP9.01□□□□□ -0.97
CLK4-207ENST00000520909 RAXQ9Y2V3 346 aa9.01□□□□□ -0.97
CLK4-207ENST00000520909 LINC01387J3KSC0 135 aa9□□□□□ -0.97
CLK4-207ENST00000520909 GSC2O15499 205 aa9□□□□□ -0.97
CLK4-207ENST00000520909 SMNDC1O75940 238 aaKnown RBP eCLIP9□□□□□ -0.973e-6■■■□□ 15.3
CLK4-207ENST00000520909 SSTR4P31391 388 aa9□□□□□ -0.97
CLK4-207ENST00000520909 ELOAQ14241 798 aaKnown RBP9□□□□□ -0.97
CLK4-207ENST00000520909 CEP135Q66GS9 1140 aa9□□□□□ -0.97
CLK4-207ENST00000520909 Q6ZS46 218 aa9□□□□□ -0.97
CLK4-207ENST00000520909 STOML1Q9UBI4 398 aa9□□□□□ -0.97
CLK4-207ENST00000520909 SCNN1AP37088 669 aa8.99□□□□□ -0.97
CLK4-207ENST00000520909 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.99□□□□□ -0.97
CLK4-207ENST00000520909 CDC27P30260 824 aa8.98□□□□□ -0.97
CLK4-207ENST00000520909 CD68P34810 354 aaPredicted RBP8.98□□□□□ -0.97
CLK4-207ENST00000520909 FAM69CQ0P6D2 419 aa8.98□□□□□ -0.97
CLK4-207ENST00000520909 NAA30Q147X3 362 aaPredicted RBP8.98□□□□□ -0.97
CLK4-207ENST00000520909 FAM26DQ5JW98 314 aa8.98□□□□□ -0.97
CLK4-207ENST00000520909 GALNT11Q8NCW6 608 aa8.98□□□□□ -0.97
CLK4-207ENST00000520909 UBL7Q96S82 380 aaPredicted RBP8.98□□□□□ -0.97
CLK4-207ENST00000520909 LACRTQ9GZZ8 138 aa8.98□□□□□ -0.97
CLK4-207ENST00000520909 ZMIZ1Q9ULJ6 1067 aa8.98□□□□□ -0.97
CLK4-207ENST00000520909 DHX15O43143 795 aaKnown RBP8.97□□□□□ -0.97
CLK4-207ENST00000520909 IGLV1-40P01703 118 aa8.97□□□□□ -0.97
CLK4-207ENST00000520909 ZAP70P43403 619 aa8.97□□□□□ -0.97
CLK4-207ENST00000520909 COL13A1Q5TAT6 717 aaPredicted RBP8.97□□□□□ -0.97
CLK4-207ENST00000520909 FAM117BQ6P1L5 589 aa8.97□□□□□ -0.97
CLK4-207ENST00000520909 MKNK1Q9BUB5 465 aa8.97□□□□□ -0.97
CLK4-207ENST00000520909 CEP41Q9BYV8 373 aa8.97□□□□□ -0.97
CLK4-207ENST00000520909 CXXC1Q9P0U4 656 aaPredicted RBP8.97□□□□□ -0.97
CLK4-207ENST00000520909 TNFRSF10BO14763 440 aa8.96□□□□□ -0.98
CLK4-207ENST00000520909 ATP11AP98196 1134 aa8.96□□□□□ -0.98
CLK4-207ENST00000520909 GPR152Q8TDT2 470 aa8.96□□□□□ -0.98
CLK4-207ENST00000520909 FAM177BA6PVY3 158 aa8.95□□□□□ -0.98
CLK4-207ENST00000520909 CDC25BP30305 580 aa8.95□□□□□ -0.98
CLK4-207ENST00000520909 CD97P48960 835 aa8.95□□□□□ -0.98
CLK4-207ENST00000520909 TXNDC11Q6PKC3 985 aa8.95□□□□□ -0.98
CLK4-207ENST00000520909 CAPN12Q6ZSI9 719 aa8.95□□□□□ -0.98
CLK4-207ENST00000520909 ACAD11Q709F0 780 aa8.95□□□□□ -0.98
CLK4-207ENST00000520909 STK32AQ8WU08 396 aa8.95□□□□□ -0.98
CLK4-207ENST00000520909 STIM2Q9P246 746 aa8.95□□□□□ -0.98
CLK4-207ENST00000520909 COBLO75128 1261 aa8.94□□□□□ -0.98
CLK4-207ENST00000520909 KLHL23Q8NBE8 558 aa8.94□□□□□ -0.98
CLK4-207ENST00000520909 RASSF4Q9H2L5 321 aa8.94□□□□□ -0.98
CLK4-207ENST00000520909 ABI2Q9NYB9 513 aaPredicted RBP8.94□□□□□ -0.98
CLK4-207ENST00000520909 COL17A1Q9UMD9 1497 aaPredicted RBP8.93□□□□□ -0.98
CLK4-207ENST00000520909 FSCN2O14926 492 aa8.93□□□□□ -0.98
CLK4-207ENST00000520909 WISP1O95388 367 aa8.93□□□□□ -0.98
CLK4-207ENST00000520909 DUOXA2Q1HG44 320 aa8.93□□□□□ -0.98
CLK4-207ENST00000520909 NCAPG2Q86XI2 1143 aa8.93□□□□□ -0.98
CLK4-207ENST00000520909 PBX4Q9BYU1 374 aa8.93□□□□□ -0.98
CLK4-207ENST00000520909 KCNK4Q9NYG8 393 aa8.93□□□□□ -0.98
CLK4-207ENST00000520909 PAX4O43316 350 aa8.92□□□□□ -0.98
CLK4-207ENST00000520909 KIF4AO95239 1232 aa8.92□□□□□ -0.98
CLK4-207ENST00000520909 UVSSAQ2YD98 709 aa8.92□□□□□ -0.98
CLK4-207ENST00000520909 ARMC10Q8N2F6 343 aa8.92□□□□□ -0.98
CLK4-207ENST00000520909 ABTB2Q8N961 1025 aa8.92□□□□□ -0.98
CLK4-207ENST00000520909 UTP4Q969X6 686 aaKnown RBP8.92□□□□□ -0.98
CLK4-207ENST00000520909 ZBTB39O15060 712 aa8.91□□□□□ -0.98
CLK4-207ENST00000520909 ATG7O95352 703 aa8.91□□□□□ -0.98
CLK4-207ENST00000520909 PTPRAP18433 802 aa8.91□□□□□ -0.98
CLK4-207ENST00000520909 CEP120Q8N960 986 aa8.91□□□□□ -0.98
CLK4-207ENST00000520909 CARD10Q9BWT7 1032 aa8.91□□□□□ -0.98
CLK4-207ENST00000520909 KRTAP4-7Q9BYR0 210 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms