RNA–Protein interactions for RNA: ENST00000519802.5

PCM1-213, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-213ENST00000519802 RGL4Q8IZJ4 473 aa8.62□□□□□ -1.03
PCM1-213ENST00000519802 SRA1Q9HD15 236 aaKnown RBP8.62□□□□□ -1.03
PCM1-213ENST00000519802 PSAPP07602 524 aa8.61□□□□□ -1.03
PCM1-213ENST00000519802 HOXD8P13378 290 aaPredicted RBP8.61□□□□□ -1.03
PCM1-213ENST00000519802 PDIA4P13667 645 aaKnown RBP8.61□□□□□ -1.03
PCM1-213ENST00000519802 MCTP1Q6DN14 999 aa8.61□□□□□ -1.03
PCM1-213ENST00000519802 GDF6Q6KF10 455 aaPredicted RBP8.61□□□□□ -1.03
PCM1-213ENST00000519802 Q6ZS46 218 aa8.61□□□□□ -1.03
PCM1-213ENST00000519802 TREML1Q86YW5 311 aa8.61□□□□□ -1.03
PCM1-213ENST00000519802 CMTR1Q8N1G2 835 aaKnown RBP8.61□□□□□ -1.03
PCM1-213ENST00000519802 IL22RA1Q8N6P7 574 aa8.61□□□□□ -1.03
PCM1-213ENST00000519802 PCMTD2Q9NV79 361 aa8.61□□□□□ -1.03
PCM1-213ENST00000519802 KCNMB2Q9Y691 235 aa8.61□□□□□ -1.03
PCM1-213ENST00000519802 MMP20O60882 483 aa8.6□□□□□ -1.03
PCM1-213ENST00000519802 SETDB1Q15047 1291 aa8.6□□□□□ -1.03
PCM1-213ENST00000519802 NSUN5Q96P11 429 aaKnown RBP8.6□□□□□ -1.03
PCM1-213ENST00000519802 GHRHP01286 108 aa8.59□□□□□ -1.03
PCM1-213ENST00000519802 SSTR4P31391 388 aa8.59□□□□□ -1.03
PCM1-213ENST00000519802 SOX18P35713 384 aa8.59□□□□□ -1.03
PCM1-213ENST00000519802 SRPK2P78362 688 aaKnown RBP8.59□□□□□ -1.03
PCM1-213ENST00000519802 MAP4K3Q8IVH8 894 aa8.59□□□□□ -1.03
PCM1-213ENST00000519802 DCAF11Q8TEB1 546 aa8.59□□□□□ -1.03
PCM1-213ENST00000519802 GOLGA2P5Q9HBQ8 144 aa8.59□□□□□ -1.03
PCM1-213ENST00000519802 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.59□□□□□ -1.032e-6■■■■■ 33.6
PCM1-213ENST00000519802 CD97P48960 835 aa8.57□□□□□ -1.04
PCM1-213ENST00000519802 COX20Q5RI15 118 aa8.57□□□□□ -1.04
PCM1-213ENST00000519802 RBSNQ9H1K0 784 aa8.57□□□□□ -1.04
PCM1-213ENST00000519802 TRIM33Q9UPN9 1127 aa8.57□□□□□ -1.04
PCM1-213ENST00000519802 CARNS1A5YM72 827 aa8.56□□□□□ -1.04
PCM1-213ENST00000519802 ATG7O95352 703 aa8.56□□□□□ -1.04
PCM1-213ENST00000519802 AGGF1Q8N302 714 aaeCLIP8.56□□□□□ -1.046e-11■■■■■ 37.5
PCM1-213ENST00000519802 FAM200AQ8TCP9 573 aa8.56□□□□□ -1.04
PCM1-213ENST00000519802 KRTAP9-9Q9BYP9 154 aa8.56□□□□□ -1.04
PCM1-213ENST00000519802 KRTAP9-4Q9BYQ2 154 aa8.56□□□□□ -1.04
PCM1-213ENST00000519802 NOVA2Q9UNW9 492 aaKnown RBP8.56□□□□□ -1.04
PCM1-213ENST00000519802 COL17A1Q9UMD9 1497 aaPredicted RBP8.56□□□□□ -1.04
PCM1-213ENST00000519802 GLB1P16278 677 aa8.55□□□□□ -1.04
PCM1-213ENST00000519802 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.55□□□□□ -1.04
PCM1-213ENST00000519802 CACTIN-AS1Q8N1I8 211 aa8.55□□□□□ -1.04
PCM1-213ENST00000519802 MUC3BQ9H195 1237 aa8.55□□□□□ -1.04
PCM1-213ENST00000519802 RAXQ9Y2V3 346 aa8.55□□□□□ -1.04
PCM1-213ENST00000519802 FKBP5Q13451 457 aaPredicted RBP8.54□□□□□ -1.04
PCM1-213ENST00000519802 TRIP4Q15650 581 aaPredicted RBP8.54□□□□□ -1.04
PCM1-213ENST00000519802 NLRP13Q86W25 1043 aa8.54□□□□□ -1.04
PCM1-213ENST00000519802 ETFBKMTQ8IXQ9 262 aa8.54□□□□□ -1.04
PCM1-213ENST00000519802 STK32AQ8WU08 396 aa8.54□□□□□ -1.04
PCM1-213ENST00000519802 PPME1Q9Y570 386 aa8.54□□□□□ -1.04
PCM1-213ENST00000519802 BTBD11A6QL63 1104 aa8.53□□□□□ -1.04
PCM1-213ENST00000519802 GSC2O15499 205 aa8.53□□□□□ -1.04
PCM1-213ENST00000519802 PTCD1O75127 700 aaKnown RBP8.53□□□□□ -1.04
PCM1-213ENST00000519802 IGLV1-40P01703 118 aa8.53□□□□□ -1.04
PCM1-213ENST00000519802 GALNT11Q8NCW6 608 aa8.53□□□□□ -1.04
PCM1-213ENST00000519802 UBL7Q96S82 380 aaPredicted RBP8.53□□□□□ -1.04
PCM1-213ENST00000519802 ZMIZ1Q9ULJ6 1067 aa8.53□□□□□ -1.04
PCM1-213ENST00000519802 MED26O95402 600 aa8.52□□□□□ -1.05
PCM1-213ENST00000519802 STOML1Q9UBI4 398 aa8.52□□□□□ -1.05
PCM1-213ENST00000519802 KIAA1324LA8MWY0 1029 aaPredicted RBP8.51□□□□□ -1.05
PCM1-213ENST00000519802 TMEM164Q5U3C3 297 aa8.51□□□□□ -1.05
PCM1-213ENST00000519802 OR13H1Q8NG92 308 aa8.51□□□□□ -1.05
PCM1-213ENST00000519802 USTQ9Y2C2 406 aa8.51□□□□□ -1.05
PCM1-213ENST00000519802 COBLO75128 1261 aa8.5□□□□□ -1.05
PCM1-213ENST00000519802 WISP1O95388 367 aa8.5□□□□□ -1.05
PCM1-213ENST00000519802 TGFB1P01137 390 aa8.5□□□□□ -1.05
PCM1-213ENST00000519802 PDE4CQ08493 712 aa8.5□□□□□ -1.05
PCM1-213ENST00000519802 FAM26DQ5JW98 314 aa8.5□□□□□ -1.05
PCM1-213ENST00000519802 COL13A1Q5TAT6 717 aaPredicted RBP8.5□□□□□ -1.05
PCM1-213ENST00000519802 AEBP1Q8IUX7 1158 aa8.5□□□□□ -1.05
PCM1-213ENST00000519802 ARMC10Q8N2F6 343 aa8.5□□□□□ -1.05
PCM1-213ENST00000519802 PRIMPOLQ96LW4 560 aa8.5□□□□□ -1.05
PCM1-213ENST00000519802 SAP130Q9H0E3 1048 aa8.5□□□□□ -1.05
PCM1-213ENST00000519802 LINC01387J3KSC0 135 aa8.49□□□□□ -1.05
PCM1-213ENST00000519802 TM4SF5O14894 197 aa8.49□□□□□ -1.05
PCM1-213ENST00000519802 DHX15O43143 795 aaKnown RBP8.49□□□□□ -1.05
PCM1-213ENST00000519802 PAX4O43316 350 aa8.49□□□□□ -1.05
PCM1-213ENST00000519802 BRD2P25440 801 aaKnown RBP8.49□□□□□ -1.05
PCM1-213ENST00000519802 ATP11AP98196 1134 aa8.49□□□□□ -1.05
PCM1-213ENST00000519802 ELOAQ14241 798 aaKnown RBP8.49□□□□□ -1.05
PCM1-213ENST00000519802 TRAIPQ9BWF2 469 aa8.49□□□□□ -1.05
PCM1-213ENST00000519802 UBAP1LF5GYI3 381 aa8.48□□□□□ -1.05
PCM1-213ENST00000519802 CD68P34810 354 aaPredicted RBP8.48□□□□□ -1.05
PCM1-213ENST00000519802 IRAK1P51617 712 aa8.48□□□□□ -1.05
PCM1-213ENST00000519802 OCLNQ16625 522 aa8.48□□□□□ -1.05
PCM1-213ENST00000519802 SWI5Q1ZZU3 235 aa8.48□□□□□ -1.05
PCM1-213ENST00000519802 C16orf46Q6P387 395 aa8.48□□□□□ -1.05
PCM1-213ENST00000519802 TXNDC11Q6PKC3 985 aa8.48□□□□□ -1.05
PCM1-213ENST00000519802 ACAD11Q709F0 780 aa8.48□□□□□ -1.05
PCM1-213ENST00000519802 CEP41Q9BYV8 373 aa8.48□□□□□ -1.05
PCM1-213ENST00000519802 KCNK4Q9NYG8 393 aa8.48□□□□□ -1.05
PCM1-213ENST00000519802 TMEM88BA6NKF7 163 aa8.47□□□□□ -1.05
PCM1-213ENST00000519802 CDC27P30260 824 aa8.47□□□□□ -1.05
PCM1-213ENST00000519802 HYAL2Q12891 473 aa8.47□□□□□ -1.05
PCM1-213ENST00000519802 CEP135Q66GS9 1140 aa8.47□□□□□ -1.05
PCM1-213ENST00000519802 ZDHHC13Q8IUH4 622 aa8.47□□□□□ -1.05
PCM1-213ENST00000519802 FMNL2Q96PY5 1086 aa8.47□□□□□ -1.05
PCM1-213ENST00000519802 LACRTQ9GZZ8 138 aa8.47□□□□□ -1.05
PCM1-213ENST00000519802 OAS3Q9Y6K5 1087 aaKnown RBP8.47□□□□□ -1.05
PCM1-213ENST00000519802 TNFRSF10BO14763 440 aa8.46□□□□□ -1.06
PCM1-213ENST00000519802 PRMT3O60678 531 aa8.46□□□□□ -1.06
PCM1-213ENST00000519802 SMNDC1O75940 238 aaKnown RBP eCLIP8.46□□□□□ -1.06
PCM1-213ENST00000519802 GP2P55259 537 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms