RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 ATP2B3Q16720 1220 aa18.59■□□□□ 0.57
THUMPD3-210ENST00000515662 CCDC158Q5M9N0 1113 aa18.59■□□□□ 0.57
THUMPD3-210ENST00000515662 TMX3Q96JJ7 454 aa18.59■□□□□ 0.57
THUMPD3-210ENST00000515662 HSP90B1P14625 803 aaKnown RBP18.59■□□□□ 0.57
THUMPD3-210ENST00000515662 RAB3GAP1Q15042 981 aa18.59■□□□□ 0.57
THUMPD3-210ENST00000515662 GORABQ5T7V8 394 aa18.59■□□□□ 0.57
THUMPD3-210ENST00000515662 CCNL1Q9UK58 526 aaPredicted RBP18.59■□□□□ 0.57
THUMPD3-210ENST00000515662 SPEF2Q9C093 1822 aa18.58■□□□□ 0.57
THUMPD3-210ENST00000515662 LAMB2P55268 1798 aa18.58■□□□□ 0.57
THUMPD3-210ENST00000515662 RGL2O15211 777 aa18.58■□□□□ 0.56
THUMPD3-210ENST00000515662 CHGBP05060 677 aa18.58■□□□□ 0.56
THUMPD3-210ENST00000515662 TTC39AQ5SRH9 613 aa18.58■□□□□ 0.56
THUMPD3-210ENST00000515662 SBF2Q86WG5 1849 aa18.58■□□□□ 0.56
THUMPD3-210ENST00000515662 TAF5LO75529 589 aa18.57■□□□□ 0.56
THUMPD3-210ENST00000515662 RPS6KA4O75676 772 aa18.57■□□□□ 0.56
THUMPD3-210ENST00000515662 CREB3L3Q68CJ9 461 aa18.57■□□□□ 0.56
THUMPD3-210ENST00000515662 SCN7AQ01118 1682 aa18.57■□□□□ 0.56
THUMPD3-210ENST00000515662 KCNJ4P48050 445 aa18.57■□□□□ 0.56
THUMPD3-210ENST00000515662 CWC22Q9HCG8 908 aaKnown RBP18.57■□□□□ 0.56
THUMPD3-210ENST00000515662 BRPF3Q9ULD4 1205 aa18.57■□□□□ 0.56
THUMPD3-210ENST00000515662 RTL9Q8NET4 1388 aa18.57■□□□□ 0.56
THUMPD3-210ENST00000515662 LY75O60449 1722 aa18.57■□□□□ 0.56
THUMPD3-210ENST00000515662 PDE8BO95263 885 aa18.56■□□□□ 0.56
THUMPD3-210ENST00000515662 MCMDC2Q4G0Z9 681 aa18.56■□□□□ 0.56
THUMPD3-210ENST00000515662 SMIM5Q71RC9 77 aa18.56■□□□□ 0.56
THUMPD3-210ENST00000515662 TTC14Q96N46 770 aa18.56■□□□□ 0.56
THUMPD3-210ENST00000515662 ABCC12Q96J65 1359 aa18.56■□□□□ 0.56
THUMPD3-210ENST00000515662 MCM4P33991 863 aa18.56■□□□□ 0.56
THUMPD3-210ENST00000515662 CUL4AQ13619 759 aa18.56■□□□□ 0.56
THUMPD3-210ENST00000515662 CCDC152Q4G0S7 254 aa18.56■□□□□ 0.56
THUMPD3-210ENST00000515662 ZGPATQ8N5A5 531 aaKnown RBP18.56■□□□□ 0.56
THUMPD3-210ENST00000515662 TNPO1Q92973 898 aaKnown RBP18.56■□□□□ 0.56
THUMPD3-210ENST00000515662 TM6SF1Q9BZW5 370 aa18.56■□□□□ 0.56
THUMPD3-210ENST00000515662 MROH5Q6ZUA9 1318 aa18.56■□□□□ 0.56
THUMPD3-210ENST00000515662 SLC27A2O14975 620 aa18.55■□□□□ 0.56
THUMPD3-210ENST00000515662 ZKSCAN1P17029 563 aaPredicted RBP18.55■□□□□ 0.56
THUMPD3-210ENST00000515662 SEC62Q99442 399 aaKnown RBP18.55■□□□□ 0.56
THUMPD3-210ENST00000515662 QTRT2Q9H974 415 aaKnown RBP18.55■□□□□ 0.56
THUMPD3-210ENST00000515662 BCL2L12Q9HB09 334 aa18.55■□□□□ 0.56
THUMPD3-210ENST00000515662 SEC31BQ9NQW1 1179 aa18.55■□□□□ 0.56
THUMPD3-210ENST00000515662 NARFQ9UHQ1 456 aa18.55■□□□□ 0.56
THUMPD3-210ENST00000515662 GNPATO15228 680 aa18.55■□□□□ 0.56
THUMPD3-210ENST00000515662 CASTP20810 708 aaKnown RBP18.55■□□□□ 0.56
THUMPD3-210ENST00000515662 ADCK5Q3MIX3 580 aa18.55■□□□□ 0.56
THUMPD3-210ENST00000515662 FKBP4Q02790 459 aaKnown RBP eCLIP18.54■□□□□ 0.56
THUMPD3-210ENST00000515662 SCARF1Q14162 830 aa18.54■□□□□ 0.56
THUMPD3-210ENST00000515662 CCDC129Q6ZRS4 1044 aa18.54■□□□□ 0.56
THUMPD3-210ENST00000515662 NOL8Q76FK4 1167 aaKnown RBP18.54■□□□□ 0.56
THUMPD3-210ENST00000515662 JAKMIP1Q96N16 626 aaKnown RBP18.54■□□□□ 0.56
THUMPD3-210ENST00000515662 ZSWIM6Q9HCJ5 1215 aa18.54■□□□□ 0.56
THUMPD3-210ENST00000515662 USPL1Q5W0Q7 1092 aa18.54■□□□□ 0.56
THUMPD3-210ENST00000515662 HELLSQ9NRZ9 838 aa18.54■□□□□ 0.56
THUMPD3-210ENST00000515662 ERFEQ4G0M1 354 aa18.53■□□□□ 0.56
THUMPD3-210ENST00000515662 ZMYM1Q5SVZ6 1142 aa18.53■□□□□ 0.56
THUMPD3-210ENST00000515662 RNF20Q5VTR2 975 aa18.53■□□□□ 0.56
THUMPD3-210ENST00000515662 TBC1D9BQ66K14 1250 aa18.53■□□□□ 0.56
THUMPD3-210ENST00000515662 ZNF512BQ96KM6 892 aaPredicted RBP18.53■□□□□ 0.56
THUMPD3-210ENST00000515662 RNF113AO15541 343 aaKnown RBP18.53■□□□□ 0.56
THUMPD3-210ENST00000515662 CPA1P15085 419 aa18.53■□□□□ 0.56
THUMPD3-210ENST00000515662 SSFA2P28290 1259 aa18.53■□□□□ 0.56
THUMPD3-210ENST00000515662 PUM3Q15397 648 aaKnown RBP18.53■□□□□ 0.56
THUMPD3-210ENST00000515662 MPHOSPH8Q99549 860 aa18.53■□□□□ 0.56
THUMPD3-210ENST00000515662 BCL11BQ9C0K0 894 aaPredicted RBP18.53■□□□□ 0.56
THUMPD3-210ENST00000515662 TAF1LQ8IZX4 1826 aa18.52■□□□□ 0.56
THUMPD3-210ENST00000515662 RPAP1Q9BWH6 1393 aaPredicted RBP18.52■□□□□ 0.56
THUMPD3-210ENST00000515662 FGFR2P21802 821 aa18.52■□□□□ 0.56
THUMPD3-210ENST00000515662 AK2P54819 239 aa18.52■□□□□ 0.56
THUMPD3-210ENST00000515662 SLFNL1Q499Z3 407 aa18.52■□□□□ 0.56
THUMPD3-210ENST00000515662 INTS4Q96HW7 963 aaKnown RBP18.52■□□□□ 0.56
THUMPD3-210ENST00000515662 SRP68Q9UHB9 627 aaKnown RBP18.52■□□□□ 0.56
THUMPD3-210ENST00000515662 RTCBQ9Y3I0 505 aaKnown RBP18.52■□□□□ 0.56
THUMPD3-210ENST00000515662 ZAP70P43403 619 aa18.52■□□□□ 0.55
THUMPD3-210ENST00000515662 NUCB2P80303 420 aa18.52■□□□□ 0.55
THUMPD3-210ENST00000515662 HELBQ8NG08 1087 aaPredicted RBP18.52■□□□□ 0.55
THUMPD3-210ENST00000515662 LPIN2Q92539 896 aa18.52■□□□□ 0.55
THUMPD3-210ENST00000515662 HMG20BQ9P0W2 317 aa18.52■□□□□ 0.55
THUMPD3-210ENST00000515662 CYP46A1Q9Y6A2 500 aa18.52■□□□□ 0.55
THUMPD3-210ENST00000515662 TSGA10IPQ3SY00 556 aa18.51■□□□□ 0.55
THUMPD3-210ENST00000515662 VPS53Q5VIR6 699 aa18.51■□□□□ 0.55
THUMPD3-210ENST00000515662 BICDL1Q6ZP65 573 aa18.51■□□□□ 0.55
THUMPD3-210ENST00000515662 AMIGO3Q86WK7 504 aa18.51■□□□□ 0.55
THUMPD3-210ENST00000515662 ZPR1O75312 459 aa18.5■□□□□ 0.55
THUMPD3-210ENST00000515662 CYP2E1P05181 493 aaPredicted RBP18.5■□□□□ 0.55
THUMPD3-210ENST00000515662 IGHMBP2P38935 993 aaKnown RBP18.5■□□□□ 0.55
THUMPD3-210ENST00000515662 MCAMP43121 646 aa18.5■□□□□ 0.55
THUMPD3-210ENST00000515662 RUFY3Q7L099 469 aa18.5■□□□□ 0.55
THUMPD3-210ENST00000515662 PDRG1Q9NUG6 133 aa18.5■□□□□ 0.55
THUMPD3-210ENST00000515662 U3KPZ7 1027 aaPredicted RBP18.5■□□□□ 0.55
THUMPD3-210ENST00000515662 ARAP2Q8WZ64 1704 aa18.5■□□□□ 0.55
THUMPD3-210ENST00000515662 LRRFIP1Q32MZ4 808 aaKnown RBP18.5■□□□□ 0.55
THUMPD3-210ENST00000515662 PI16Q6UXB8 463 aa18.5■□□□□ 0.55
THUMPD3-210ENST00000515662 LIMCH1Q9UPQ0 1083 aa18.5■□□□□ 0.55
THUMPD3-210ENST00000515662 TAF6LQ9Y6J9 622 aa18.5■□□□□ 0.55
THUMPD3-210ENST00000515662 C4BP0C0L5 1744 aa18.5■□□□□ 0.55
THUMPD3-210ENST00000515662 PSMA5P28066 241 aa18.49■□□□□ 0.55
THUMPD3-210ENST00000515662 SF3B3Q15393 1217 aaKnown RBP18.49■□□□□ 0.55
THUMPD3-210ENST00000515662 SLC10A5Q5PT55 438 aa18.49■□□□□ 0.55
THUMPD3-210ENST00000515662 C3orf67Q6ZVT6 689 aa18.49■□□□□ 0.55
THUMPD3-210ENST00000515662 ARHGEF1Q92888 912 aaKnown RBP18.49■□□□□ 0.55
THUMPD3-210ENST00000515662 GBP4Q96PP9 640 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms