RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 ZNF16P17020 682 aaPredicted RBP6.55□□□□□ -1.36
CALCOCO2-220ENST00000511816 TRIP4Q15650 581 aaPredicted RBP6.55□□□□□ -1.36
CALCOCO2-220ENST00000511816 ENOX2Q16206 610 aaKnown RBP6.55□□□□□ -1.36
CALCOCO2-220ENST00000511816 ELOA3BQ3SY89 546 aa6.55□□□□□ -1.36
CALCOCO2-220ENST00000511816 RAB44Q7Z6P3 723 aaPredicted RBP6.55□□□□□ -1.36
CALCOCO2-220ENST00000511816 ELOA3Q8NG57 546 aa6.55□□□□□ -1.36
CALCOCO2-220ENST00000511816 SLC30A3Q99726 388 aa6.55□□□□□ -1.36
CALCOCO2-220ENST00000511816 MRS2Q9HD23 443 aa6.55□□□□□ -1.36
CALCOCO2-220ENST00000511816 NLRP2Q9NX02 1062 aa6.55□□□□□ -1.36
CALCOCO2-220ENST00000511816 PPP4R2Q9NY27 417 aa6.55□□□□□ -1.36
CALCOCO2-220ENST00000511816 A6NHS1 94 aa6.54□□□□□ -1.36
CALCOCO2-220ENST00000511816 EIF1AYO14602 144 aaKnown RBP6.54□□□□□ -1.36
CALCOCO2-220ENST00000511816 ARHGEF15O94989 841 aa6.54□□□□□ -1.36
CALCOCO2-220ENST00000511816 IGHA2P01877 340 aa6.54□□□□□ -1.36
CALCOCO2-220ENST00000511816 NFKB1P19838 968 aa6.54□□□□□ -1.36
CALCOCO2-220ENST00000511816 CES1P23141 567 aa6.54□□□□□ -1.36
CALCOCO2-220ENST00000511816 GSK3AP49840 483 aa6.54□□□□□ -1.36
CALCOCO2-220ENST00000511816 KANK3Q6NY19 840 aa6.54□□□□□ -1.36
CALCOCO2-220ENST00000511816 KRT25Q7Z3Z0 450 aa6.54□□□□□ -1.36
CALCOCO2-220ENST00000511816 FBXO33Q7Z6M2 555 aa6.54□□□□□ -1.36
CALCOCO2-220ENST00000511816 TNFRSF25Q93038 417 aa6.54□□□□□ -1.36
CALCOCO2-220ENST00000511816 SPACA7Q96KW9 195 aa6.54□□□□□ -1.36
CALCOCO2-220ENST00000511816 MKL2Q9ULH7 1088 aa6.54□□□□□ -1.36
CALCOCO2-220ENST00000511816 SPG7Q9UQ90 795 aa6.54□□□□□ -1.36
CALCOCO2-220ENST00000511816 GIPC1O14908 333 aa6.53□□□□□ -1.36
CALCOCO2-220ENST00000511816 MAP3K6O95382 1288 aa6.53□□□□□ -1.36
CALCOCO2-220ENST00000511816 EDN3P14138 238 aa6.53□□□□□ -1.36
CALCOCO2-220ENST00000511816 TARSP26639 723 aaKnown RBP6.53□□□□□ -1.36
CALCOCO2-220ENST00000511816 SOX18P35713 384 aa6.53□□□□□ -1.36
CALCOCO2-220ENST00000511816 PLAURQ03405 335 aa6.53□□□□□ -1.36
CALCOCO2-220ENST00000511816 FCHSD1Q86WN1 690 aa6.53□□□□□ -1.36
CALCOCO2-220ENST00000511816 RBSNQ9H1K0 784 aa6.53□□□□□ -1.36
CALCOCO2-220ENST00000511816 ZFYVE28Q9HCC9 887 aa6.53□□□□□ -1.36
CALCOCO2-220ENST00000511816 TMEM63CQ9P1W3 806 aa6.53□□□□□ -1.36
CALCOCO2-220ENST00000511816 SPDYE3A6NKU9 549 aa6.52□□□□□ -1.37
CALCOCO2-220ENST00000511816 ADARB2-AS1A8MUL3 147 aa6.52□□□□□ -1.37
CALCOCO2-220ENST00000511816 ADH7P40394 386 aa6.52□□□□□ -1.37
CALCOCO2-220ENST00000511816 HYAL2Q12891 473 aa6.52□□□□□ -1.37
CALCOCO2-220ENST00000511816 ORC1Q13415 861 aa6.52□□□□□ -1.37
CALCOCO2-220ENST00000511816 CHSY3Q70JA7 882 aa6.52□□□□□ -1.37
CALCOCO2-220ENST00000511816 OR13H1Q8NG92 308 aa6.52□□□□□ -1.37
CALCOCO2-220ENST00000511816 TLR7Q9NYK1 1049 aaKnown RBP6.52□□□□□ -1.37
CALCOCO2-220ENST00000511816 FOXD3Q9UJU5 478 aaPredicted RBP6.52□□□□□ -1.37
CALCOCO2-220ENST00000511816 SHISA8B8ZZ34 492 aa6.51□□□□□ -1.37
CALCOCO2-220ENST00000511816 MMP20O60882 483 aa6.51□□□□□ -1.37
CALCOCO2-220ENST00000511816 GRNP28799 593 aaKnown RBP6.51□□□□□ -1.37
CALCOCO2-220ENST00000511816 PSMD2Q13200 908 aa6.51□□□□□ -1.37
CALCOCO2-220ENST00000511816 NCAPG2Q86XI2 1143 aa6.51□□□□□ -1.37
CALCOCO2-220ENST00000511816 C1orf127Q8N9H9 656 aa6.51□□□□□ -1.37
CALCOCO2-220ENST00000511816 MRRFQ96E11 262 aaKnown RBP6.51□□□□□ -1.37
CALCOCO2-220ENST00000511816 BTBD6Q96KE9 485 aa6.51□□□□□ -1.37
CALCOCO2-220ENST00000511816 NOP53Q9NZM5 478 aaKnown RBP6.51□□□□□ -1.37
CALCOCO2-220ENST00000511816 SORBS3O60504 671 aa6.5□□□□□ -1.37
CALCOCO2-220ENST00000511816 NRLP54845 237 aa6.5□□□□□ -1.37
CALCOCO2-220ENST00000511816 GRIN2CQ14957 1233 aa6.5□□□□□ -1.37
CALCOCO2-220ENST00000511816 DHX32Q7L7V1 743 aaKnown RBP6.5□□□□□ -1.37
CALCOCO2-220ENST00000511816 CCDC74AQ96AQ1 378 aa6.5□□□□□ -1.37
CALCOCO2-220ENST00000511816 DUSP9Q99956 384 aaKnown RBP6.5□□□□□ -1.37
CALCOCO2-220ENST00000511816 SRCIN1Q9C0H9 1055 aa6.5□□□□□ -1.37
CALCOCO2-220ENST00000511816 PARP2Q9UGN5 583 aa6.5□□□□□ -1.37
CALCOCO2-220ENST00000511816 HCN2Q9UL51 889 aa6.5□□□□□ -1.37
CALCOCO2-220ENST00000511816 GNB5O14775 395 aa6.49□□□□□ -1.37
CALCOCO2-220ENST00000511816 GADD45BO75293 160 aaPredicted RBP6.49□□□□□ -1.37
CALCOCO2-220ENST00000511816 GHRHP01286 108 aa6.49□□□□□ -1.37
CALCOCO2-220ENST00000511816 VAMP1P23763 118 aa6.49□□□□□ -1.37
CALCOCO2-220ENST00000511816 GNA15P30679 374 aa6.49□□□□□ -1.37
CALCOCO2-220ENST00000511816 C1orf229Q6ZS94 237 aaPredicted RBP6.49□□□□□ -1.37
CALCOCO2-220ENST00000511816 TMC4Q7Z404 712 aa6.49□□□□□ -1.37
CALCOCO2-220ENST00000511816 GALNT12Q8IXK2 581 aa6.49□□□□□ -1.37
CALCOCO2-220ENST00000511816 MICALL1Q8N3F8 863 aa6.49□□□□□ -1.37
CALCOCO2-220ENST00000511816 DNAJB12Q9NXW2 375 aaKnown RBP6.49□□□□□ -1.37
CALCOCO2-220ENST00000511816 CNTN3Q9P232 1028 aa6.49□□□□□ -1.37
CALCOCO2-220ENST00000511816 KLF15Q9UIH9 416 aa6.49□□□□□ -1.37
CALCOCO2-220ENST00000511816 TRAK1Q9UPV9 953 aa6.49□□□□□ -1.37
CALCOCO2-220ENST00000511816 EREGO14944 169 aa6.48□□□□□ -1.37
CALCOCO2-220ENST00000511816 DAB2P98082 770 aa6.48□□□□□ -1.37
CALCOCO2-220ENST00000511816 FAM35AQ86V20 835 aa6.48□□□□□ -1.37
CALCOCO2-220ENST00000511816 ALYREFQ86V81 257 aaKnown RBP6.48□□□□□ -1.37
CALCOCO2-220ENST00000511816 ZFYVE1Q9HBF4 777 aa6.48□□□□□ -1.37
CALCOCO2-220ENST00000511816 ZFATQ9P243 1243 aa6.48□□□□□ -1.37
CALCOCO2-220ENST00000511816 SLC6A14Q9UN76 642 aa6.48□□□□□ -1.37
CALCOCO2-220ENST00000511816 FAM177BA6PVY3 158 aa6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 M0R082 166 aa6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 LILRB5O75023 590 aa6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 HOXD8P13378 290 aaPredicted RBP6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 EIF4BP23588 611 aaKnown RBP6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 IRS1P35568 1242 aa6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 GPLD1P80108 840 aa6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 ELMSAN1Q6PJG2 1045 aa6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 ZNF417Q8TAU3 575 aa6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 TRPM4Q8TD43 1214 aa6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 ZNF587Q96SQ5 575 aaPredicted RBP6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 EHD4Q9H223 541 aa6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 CHRDQ9H2X0 955 aa6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 JPH1Q9HDC5 661 aaPredicted RBP6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 NPHS2Q9NP85 383 aa6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 KANSL3Q9P2N6 904 aa6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 VTI1BQ9UEU0 232 aa6.47□□□□□ -1.37
CALCOCO2-220ENST00000511816 WWC3Q9ULE0 1092 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms