RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.97□□□□□ -1.29
SCAMP1-204ENST00000511551 MUC3BQ9H195 1237 aa6.97□□□□□ -1.29
SCAMP1-204ENST00000511551 USP20Q9Y2K6 914 aa6.97□□□□□ -1.29
SCAMP1-204ENST00000511551 COBLO75128 1261 aa6.96□□□□□ -1.3
SCAMP1-204ENST00000511551 GHRHP01286 108 aa6.96□□□□□ -1.3
SCAMP1-204ENST00000511551 TREML1Q86YW5 311 aa6.96□□□□□ -1.3
SCAMP1-204ENST00000511551 CMTR1Q8N1G2 835 aaKnown RBP6.96□□□□□ -1.3
SCAMP1-204ENST00000511551 UBL7Q96S82 380 aaPredicted RBP6.96□□□□□ -1.3
SCAMP1-204ENST00000511551 RBSNQ9H1K0 784 aa6.96□□□□□ -1.3
SCAMP1-204ENST00000511551 VRTNQ9H8Y1 702 aa6.96□□□□□ -1.3
SCAMP1-204ENST00000511551 PTCD1O75127 700 aaKnown RBP6.95□□□□□ -1.3
SCAMP1-204ENST00000511551 IRAK1P51617 712 aa6.95□□□□□ -1.3
SCAMP1-204ENST00000511551 RGL4Q8IZJ4 473 aa6.95□□□□□ -1.3
SCAMP1-204ENST00000511551 VTI1AQ96AJ9 217 aa6.95□□□□□ -1.3
SCAMP1-204ENST00000511551 STOML1Q9UBI4 398 aa6.95□□□□□ -1.3
SCAMP1-204ENST00000511551 GLB1P16278 677 aa6.94□□□□□ -1.3
SCAMP1-204ENST00000511551 AGGF1Q8N302 714 aaeCLIP6.94□□□□□ -1.3
SCAMP1-204ENST00000511551 NSUN5Q96P11 429 aaKnown RBP6.94□□□□□ -1.3
SCAMP1-204ENST00000511551 TRIM33Q9UPN9 1127 aa6.94□□□□□ -1.3
SCAMP1-204ENST00000511551 PPME1Q9Y570 386 aa6.94□□□□□ -1.3
SCAMP1-204ENST00000511551 OAS3Q9Y6K5 1087 aaKnown RBP6.94□□□□□ -1.3
SCAMP1-204ENST00000511551 TM4SF5O14894 197 aa6.93□□□□□ -1.3
SCAMP1-204ENST00000511551 DHX15O43143 795 aaKnown RBP6.93□□□□□ -1.3
SCAMP1-204ENST00000511551 TGFB1P01137 390 aa6.93□□□□□ -1.3
SCAMP1-204ENST00000511551 GP2P55259 537 aaKnown RBP6.93□□□□□ -1.3
SCAMP1-204ENST00000511551 COX20Q5RI15 118 aa6.93□□□□□ -1.3
SCAMP1-204ENST00000511551 NLRP13Q86W25 1043 aa6.93□□□□□ -1.3
SCAMP1-204ENST00000511551 PROSER2Q86WR7 435 aaPredicted RBP6.93□□□□□ -1.3
SCAMP1-204ENST00000511551 ARMC10Q8N2F6 343 aa6.93□□□□□ -1.3
SCAMP1-204ENST00000511551 GALNT11Q8NCW6 608 aa6.93□□□□□ -1.3
SCAMP1-204ENST00000511551 YBX3P16989 372 aaKnown RBP eCLIP6.92□□□□□ -1.3
SCAMP1-204ENST00000511551 TAL1P17542 331 aaPredicted RBP6.92□□□□□ -1.3
SCAMP1-204ENST00000511551 ZDHHC13Q8IUH4 622 aa6.92□□□□□ -1.3
SCAMP1-204ENST00000511551 CLUAP1Q96AJ1 413 aa6.92□□□□□ -1.3
SCAMP1-204ENST00000511551 LMOD1P29536 600 aaPredicted RBP6.91□□□□□ -1.3
SCAMP1-204ENST00000511551 UVSSAQ2YD98 709 aa6.91□□□□□ -1.3
SCAMP1-204ENST00000511551 INTS5Q6P9B9 1019 aaKnown RBP6.91□□□□□ -1.3
SCAMP1-204ENST00000511551 OR13H1Q8NG92 308 aa6.91□□□□□ -1.3
SCAMP1-204ENST00000511551 CEP41Q9BYV8 373 aa6.91□□□□□ -1.3
SCAMP1-204ENST00000511551 ADAMTS4O75173 837 aa6.9□□□□□ -1.3
SCAMP1-204ENST00000511551 WISP1O95388 367 aa6.9□□□□□ -1.3
SCAMP1-204ENST00000511551 SPINK2P20155 84 aa6.9□□□□□ -1.3
SCAMP1-204ENST00000511551 CD68P34810 354 aaPredicted RBP6.9□□□□□ -1.3
SCAMP1-204ENST00000511551 NFIAQ12857 509 aa6.9□□□□□ -1.3
SCAMP1-204ENST00000511551 TRIP4Q15650 581 aaPredicted RBP6.9□□□□□ -1.3
SCAMP1-204ENST00000511551 FAM200AQ8TCP9 573 aa6.9□□□□□ -1.3
SCAMP1-204ENST00000511551 FAM46AQ96IP4 442 aaKnown RBP6.9□□□□□ -1.3
SCAMP1-204ENST00000511551 CALR3Q96L12 384 aaKnown RBP6.9□□□□□ -1.3
SCAMP1-204ENST00000511551 PRR19A6NJB7 356 aa6.89□□□□□ -1.31
SCAMP1-204ENST00000511551 LINC01387J3KSC0 135 aa6.89□□□□□ -1.31
SCAMP1-204ENST00000511551 ETFBKMTQ8IXQ9 262 aa6.89□□□□□ -1.31
SCAMP1-204ENST00000511551 KCNK4Q9NYG8 393 aa6.89□□□□□ -1.31
SCAMP1-204ENST00000511551 BRD2P25440 801 aaKnown RBP6.88□□□□□ -1.31
SCAMP1-204ENST00000511551 GRIK1P39086 918 aa6.88□□□□□ -1.31
SCAMP1-204ENST00000511551 FKBP5Q13451 457 aaPredicted RBP6.88□□□□□ -1.31
SCAMP1-204ENST00000511551 COL13A1Q5TAT6 717 aaPredicted RBP6.88□□□□□ -1.31
SCAMP1-204ENST00000511551 RNF43Q68DV7 783 aa6.88□□□□□ -1.31
SCAMP1-204ENST00000511551 KIAA1211Q6ZU35 1233 aa6.88□□□□□ -1.31
SCAMP1-204ENST00000511551 DTX1Q86Y01 620 aa6.88□□□□□ -1.31
SCAMP1-204ENST00000511551 C7orf69Q9H7B7 122 aa6.88□□□□□ -1.31
SCAMP1-204ENST00000511551 CDC27P30260 824 aa6.87□□□□□ -1.31
SCAMP1-204ENST00000511551 HYAL2Q12891 473 aa6.87□□□□□ -1.31
SCAMP1-204ENST00000511551 ACAD11Q709F0 780 aa6.87□□□□□ -1.31
SCAMP1-204ENST00000511551 TRIM42Q8IWZ5 723 aa6.87□□□□□ -1.31
SCAMP1-204ENST00000511551 KLHL23Q8NBE8 558 aa6.87□□□□□ -1.31
SCAMP1-204ENST00000511551 MYRFLQ96LU7 910 aa6.87□□□□□ -1.31
SCAMP1-204ENST00000511551 DBNDD2Q9BQY9 259 aa6.87□□□□□ -1.31
SCAMP1-204ENST00000511551 FSCN2O14926 492 aa6.86□□□□□ -1.31
SCAMP1-204ENST00000511551 SMNDC1O75940 238 aaKnown RBP eCLIP6.86□□□□□ -1.31
SCAMP1-204ENST00000511551 FAM26DQ5JW98 314 aa6.86□□□□□ -1.31
SCAMP1-204ENST00000511551 CLEC10AQ8IUN9 316 aa6.86□□□□□ -1.31
SCAMP1-204ENST00000511551 UTP4Q969X6 686 aaKnown RBP6.86□□□□□ -1.31
SCAMP1-204ENST00000511551 COL26A1Q96A83 441 aa6.86□□□□□ -1.31
SCAMP1-204ENST00000511551 RNF114Q9Y508 228 aa6.86□□□□□ -1.31
SCAMP1-204ENST00000511551 HMX2A2RU54 273 aa6.85□□□□□ -1.31
SCAMP1-204ENST00000511551 UBAP1LF5GYI3 381 aa6.85□□□□□ -1.31
SCAMP1-204ENST00000511551 KIF4AO95239 1232 aa6.85□□□□□ -1.31
SCAMP1-204ENST00000511551 ATP11AP98196 1134 aa6.85□□□□□ -1.31
SCAMP1-204ENST00000511551 CFAP70Q5T0N1 1121 aa6.85□□□□□ -1.31
SCAMP1-204ENST00000511551 CEP135Q66GS9 1140 aa6.85□□□□□ -1.31
SCAMP1-204ENST00000511551 ADAMTSL4Q6UY14 1074 aa6.85□□□□□ -1.31
SCAMP1-204ENST00000511551 PIK3R5Q8WYR1 880 aa6.85□□□□□ -1.31
SCAMP1-204ENST00000511551 SPACA7Q96KW9 195 aa6.85□□□□□ -1.31
SCAMP1-204ENST00000511551 FAM83CQ9BQN1 747 aa6.85□□□□□ -1.31
SCAMP1-204ENST00000511551 SAP130Q9H0E3 1048 aa6.85□□□□□ -1.31
SCAMP1-204ENST00000511551 FAM13BQ9NYF5 915 aa6.85□□□□□ -1.31
SCAMP1-204ENST00000511551 A6NJR5 290 aa6.84□□□□□ -1.31
SCAMP1-204ENST00000511551 OCLNQ16625 522 aa6.84□□□□□ -1.31
SCAMP1-204ENST00000511551 DUOXA2Q1HG44 320 aa6.84□□□□□ -1.31
SCAMP1-204ENST00000511551 SWI5Q1ZZU3 235 aa6.84□□□□□ -1.31
SCAMP1-204ENST00000511551 C16orf46Q6P387 395 aa6.84□□□□□ -1.31
SCAMP1-204ENST00000511551 TXNDC11Q6PKC3 985 aa6.84□□□□□ -1.31
SCAMP1-204ENST00000511551 FAM20CQ8IXL6 584 aa6.84□□□□□ -1.31
SCAMP1-204ENST00000511551 LACRTQ9GZZ8 138 aa6.84□□□□□ -1.31
SCAMP1-204ENST00000511551 ADAM19Q9H013 955 aa6.84□□□□□ -1.31
SCAMP1-204ENST00000511551 TNFRSF10BO14763 440 aa6.83□□□□□ -1.32
SCAMP1-204ENST00000511551 WNT11O96014 354 aa6.83□□□□□ -1.32
SCAMP1-204ENST00000511551 CEP120Q8N960 986 aa6.83□□□□□ -1.32
SCAMP1-204ENST00000511551 PRIMPOLQ96LW4 560 aa6.83□□□□□ -1.32
SCAMP1-204ENST00000511551 PBX4Q9BYU1 374 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms