RNA–Protein interactions for RNA: ENST00000509870.1

HOXC-AS3-201, HOXC cluster antisense RNA 3, humanhuman

TSL 4 BASIC

Gene HOXC-AS3, Length 544 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC-AS3-201ENST00000509870 G3V3G9 751 aa19.28■□□□□ 0.68
HOXC-AS3-201ENST00000509870 UFL1O94874 794 aa19.28■□□□□ 0.68
HOXC-AS3-201ENST00000509870 DCAF8Q5TAQ9 597 aa19.28■□□□□ 0.68
HOXC-AS3-201ENST00000509870 DBNDD1Q9H9R9 158 aa19.28■□□□□ 0.68
HOXC-AS3-201ENST00000509870 BSDC1Q9NW68 430 aaPredicted RBP19.28■□□□□ 0.68
HOXC-AS3-201ENST00000509870 XDHP47989 1333 aa19.27■□□□□ 0.68
HOXC-AS3-201ENST00000509870 H7C1D1 291 aa19.27■□□□□ 0.68
HOXC-AS3-201ENST00000509870 ECE2O60344 883 aa19.27■□□□□ 0.68
HOXC-AS3-201ENST00000509870 ATP2B4P23634 1241 aa19.27■□□□□ 0.68
HOXC-AS3-201ENST00000509870 RPS12P25398 132 aaKnown RBP19.27■□□□□ 0.68
HOXC-AS3-201ENST00000509870 ZC3H15Q8WU90 426 aaKnown RBP19.27■□□□□ 0.68
HOXC-AS3-201ENST00000509870 GREM2Q9H772 168 aa19.27■□□□□ 0.68
HOXC-AS3-201ENST00000509870 CNOT7Q9UIV1 285 aaKnown RBP19.27■□□□□ 0.68
HOXC-AS3-201ENST00000509870 CACNA1FO60840 1977 aa19.26■□□□□ 0.67
HOXC-AS3-201ENST00000509870 LTBP1Q14766 1721 aa19.26■□□□□ 0.67
HOXC-AS3-201ENST00000509870 PSMD14O00487 310 aa19.26■□□□□ 0.67
HOXC-AS3-201ENST00000509870 CASP7P55210 303 aa19.26■□□□□ 0.67
HOXC-AS3-201ENST00000509870 DOK7Q18PE1 504 aa19.26■□□□□ 0.67
HOXC-AS3-201ENST00000509870 PGAP2Q9UHJ9 254 aa19.26■□□□□ 0.67
HOXC-AS3-201ENST00000509870 COL4A1P02462 1669 aa19.26■□□□□ 0.67
HOXC-AS3-201ENST00000509870 CSF1RP07333 972 aa19.25■□□□□ 0.67
HOXC-AS3-201ENST00000509870 IGHMBP2P38935 993 aaKnown RBP19.25■□□□□ 0.67
HOXC-AS3-201ENST00000509870 BEND3Q5T5X7 828 aa19.25■□□□□ 0.67
HOXC-AS3-201ENST00000509870 MKRN1Q9UHC7 482 aaKnown RBP19.25■□□□□ 0.67
HOXC-AS3-201ENST00000509870 MINPP1Q9UNW1 487 aa19.25■□□□□ 0.67
HOXC-AS3-201ENST00000509870 CNTNAP1P78357 1384 aa19.24■□□□□ 0.67
HOXC-AS3-201ENST00000509870 E9PSI1 815 aa19.24■□□□□ 0.67
HOXC-AS3-201ENST00000509870 MICALL2Q8IY33 904 aa19.24■□□□□ 0.67
HOXC-AS3-201ENST00000509870 GPR101Q96P66 508 aaPredicted RBP19.24■□□□□ 0.67
HOXC-AS3-201ENST00000509870 F6X3S4 739 aa19.23■□□□□ 0.67
HOXC-AS3-201ENST00000509870 VIL1P09327 827 aaKnown RBP19.23■□□□□ 0.67
HOXC-AS3-201ENST00000509870 ZBTB12Q9Y330 459 aaPredicted RBP19.23■□□□□ 0.67
HOXC-AS3-201ENST00000509870 ITGA6P23229 1130 aa19.22■□□□□ 0.67
HOXC-AS3-201ENST00000509870 HIRAP54198 1017 aaPredicted RBP19.22■□□□□ 0.67
HOXC-AS3-201ENST00000509870 PODNQ7Z5L7 613 aa19.22■□□□□ 0.67
HOXC-AS3-201ENST00000509870 MPHOSPH8Q99549 860 aa19.22■□□□□ 0.67
HOXC-AS3-201ENST00000509870 KCNQ5Q9NR82 932 aa19.22■□□□□ 0.67
HOXC-AS3-201ENST00000509870 RASSF10A6NK89 507 aa19.21■□□□□ 0.67
HOXC-AS3-201ENST00000509870 CCER2I3L3R5 266 aa19.21■□□□□ 0.67
HOXC-AS3-201ENST00000509870 ALDH1L1O75891 902 aa19.21■□□□□ 0.67
HOXC-AS3-201ENST00000509870 DEFB115Q30KQ5 88 aa19.21■□□□□ 0.67
HOXC-AS3-201ENST00000509870 ANKRD2Q9GZV1 360 aa19.21■□□□□ 0.67
HOXC-AS3-201ENST00000509870 LEMD3Q9Y2U8 911 aa19.21■□□□□ 0.67
HOXC-AS3-201ENST00000509870 ANKRD18BA2A2Z9 1011 aa19.2■□□□□ 0.66
HOXC-AS3-201ENST00000509870 CCT4P50991 539 aaKnown RBP19.2■□□□□ 0.66
HOXC-AS3-201ENST00000509870 FAM161AQ3B820 660 aa19.2■□□□□ 0.66
HOXC-AS3-201ENST00000509870 CDC37L1Q7L3B6 337 aa19.2■□□□□ 0.66
HOXC-AS3-201ENST00000509870 TRPM4Q8TD43 1214 aa19.2■□□□□ 0.66
HOXC-AS3-201ENST00000509870 ABT1Q9ULW3 272 aaKnown RBP19.2■□□□□ 0.66
HOXC-AS3-201ENST00000509870 GRM8O00222 908 aa19.19■□□□□ 0.66
HOXC-AS3-201ENST00000509870 TRAF5O00463 557 aa19.19■□□□□ 0.66
HOXC-AS3-201ENST00000509870 VEGFBP49765 207 aa19.19■□□□□ 0.66
HOXC-AS3-201ENST00000509870 FOXO4P98177 505 aa19.19■□□□□ 0.66
HOXC-AS3-201ENST00000509870 SLFN5Q08AF3 891 aa19.19■□□□□ 0.66
HOXC-AS3-201ENST00000509870 IFIT5Q13325 482 aaKnown RBP19.19■□□□□ 0.66
HOXC-AS3-201ENST00000509870 AGBL3Q8NEM8 1001 aa19.19■□□□□ 0.66
HOXC-AS3-201ENST00000509870 SRCIN1Q9C0H9 1055 aa19.19■□□□□ 0.66
HOXC-AS3-201ENST00000509870 C9orf78Q9NZ63 289 aaPredicted RBP19.19■□□□□ 0.66
HOXC-AS3-201ENST00000509870 MED23Q9ULK4 1368 aa19.19■□□□□ 0.66
HOXC-AS3-201ENST00000509870 SHTN1A0MZ66 631 aa19.18■□□□□ 0.66
HOXC-AS3-201ENST00000509870 HSPA1AP0DMV8 641 aaKnown RBP19.18■□□□□ 0.66
HOXC-AS3-201ENST00000509870 HSPA1BP0DMV9 641 aaKnown RBP19.18■□□□□ 0.66
HOXC-AS3-201ENST00000509870 IFFO2Q5TF58 517 aa19.18■□□□□ 0.66
HOXC-AS3-201ENST00000509870 CST9Q5W186 159 aa19.18■□□□□ 0.66
HOXC-AS3-201ENST00000509870 SLC4A10Q6U841 1118 aa19.18■□□□□ 0.66
HOXC-AS3-201ENST00000509870 SAMD7Q7Z3H4 446 aa19.18■□□□□ 0.66
HOXC-AS3-201ENST00000509870 USP17L3A6NCW0 530 aa19.17■□□□□ 0.66
HOXC-AS3-201ENST00000509870 USP17L4A6NCW7 530 aa19.17■□□□□ 0.66
HOXC-AS3-201ENST00000509870 RSBN1LQ6PCB5 846 aaPredicted RBP19.17■□□□□ 0.66
HOXC-AS3-201ENST00000509870 USP17L1Q7RTZ2 530 aa19.17■□□□□ 0.66
HOXC-AS3-201ENST00000509870 GLIS2Q9BZE0 524 aaPredicted RBP19.17■□□□□ 0.66
HOXC-AS3-201ENST00000509870 COA1Q9GZY4 146 aa19.17■□□□□ 0.66
HOXC-AS3-201ENST00000509870 MYH3P11055 1940 aa19.17■□□□□ 0.66
HOXC-AS3-201ENST00000509870 FMR1Q06787 632 aaKnown RBP eCLIP19.16■□□□□ 0.66
HOXC-AS3-201ENST00000509870 TBC1D10BQ4KMP7 808 aaPredicted RBP19.16■□□□□ 0.66
HOXC-AS3-201ENST00000509870 MRPL50Q8N5N7 158 aaKnown RBP19.16■□□□□ 0.66
HOXC-AS3-201ENST00000509870 ZNF804BA4D1E1 1349 aa19.16■□□□□ 0.66
HOXC-AS3-201ENST00000509870 PTPRCP08575 1304 aa19.16■□□□□ 0.66
HOXC-AS3-201ENST00000509870 ZNF609O15014 1411 aa19.16■□□□□ 0.66
HOXC-AS3-201ENST00000509870 WTIPA6NIX2 430 aaPredicted RBP19.15■□□□□ 0.66
HOXC-AS3-201ENST00000509870 ECE1P42892 770 aa19.15■□□□□ 0.66
HOXC-AS3-201ENST00000509870 ZNF280AP59817 542 aaPredicted RBP19.15■□□□□ 0.66
HOXC-AS3-201ENST00000509870 CCDC57Q2TAC2 916 aa19.15■□□□□ 0.66
HOXC-AS3-201ENST00000509870 RBM26Q5T8P6 1007 aaKnown RBP19.15■□□□□ 0.66
HOXC-AS3-201ENST00000509870 LMBR1LQ6UX01 489 aa19.15■□□□□ 0.66
HOXC-AS3-201ENST00000509870 DCPSQ96C86 337 aaKnown RBP19.15■□□□□ 0.66
HOXC-AS3-201ENST00000509870 CHMP3Q9Y3E7 222 aa19.15■□□□□ 0.66
HOXC-AS3-201ENST00000509870 TLL2Q9Y6L7 1015 aa19.15■□□□□ 0.66
HOXC-AS3-201ENST00000509870 CELF2O95319 508 aaKnown RBP19.14■□□□□ 0.65
HOXC-AS3-201ENST00000509870 USP17L8P0C7I0 530 aa19.14■□□□□ 0.65
HOXC-AS3-201ENST00000509870 KCNJ4P48050 445 aa19.14■□□□□ 0.65
HOXC-AS3-201ENST00000509870 CHRNDQ07001 517 aa19.14■□□□□ 0.65
HOXC-AS3-201ENST00000509870 KIF4BQ2VIQ3 1234 aa19.14■□□□□ 0.65
HOXC-AS3-201ENST00000509870 GMLQ99445 158 aa19.14■□□□□ 0.65
HOXC-AS3-201ENST00000509870 WDR33Q9C0J8 1336 aaKnown RBP19.14■□□□□ 0.65
HOXC-AS3-201ENST00000509870 EGFRP00533 1210 aa19.13■□□□□ 0.65
HOXC-AS3-201ENST00000509870 ALDH1L2Q3SY69 923 aa19.13■□□□□ 0.65
HOXC-AS3-201ENST00000509870 KRT26Q7Z3Y9 468 aa19.13■□□□□ 0.65
HOXC-AS3-201ENST00000509870 USP48Q86UV5 1035 aa19.13■□□□□ 0.65
HOXC-AS3-201ENST00000509870 SSH1Q8WYL5 1049 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms