RNA–Protein interactions for RNA: ENST00000509418.1

SMARCAD1-206, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2 BASIC

Gene SMARCAD1, Length 2,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-206ENST00000509418 ANKS3Q6ZW76 656 aa3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 HS2ST1Q7LGA3 356 aa3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 LILRB2Q8N423 598 aa3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 HNRNPLLQ8WVV9 542 aaKnown RBP3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 GPRASP2Q96D09 838 aa3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 DEPDC7Q96QD5 511 aa3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 FAM129BQ96TA1 746 aa3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 SFMBT1Q9UHJ3 866 aa3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 PRKAB1Q9Y478 270 aa3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 ZBTB39O15060 712 aa3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 MASP1P48740 699 aa3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 RNF144AP50876 292 aaPredicted RBP3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 DHX8Q14562 1220 aaKnown RBP3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 TKFCQ3LXA3 575 aa3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 C8orf48Q96LL4 319 aa3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 DMRTB1Q96MA1 342 aa3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 SLKQ9H2G2 1235 aaPredicted RBP3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 HOMER2Q9NSB8 354 aa3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 DNMT3LQ9UJW3 386 aa3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 AK5Q9Y6K8 562 aa3.54□□□□□ -1.84
SMARCAD1-206ENST00000509418 HMGB1P1B2RPK0 211 aaPredicted RBP3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 F6X3S4 739 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 BDNFP23560 247 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 PTSQ03393 145 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 OS9Q13438 667 aaPredicted RBP3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 FAM26DQ5JW98 314 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 KANK3Q6NY19 840 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 CCDC155Q8N6L0 562 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 SLC39A13Q96H72 371 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 FRMD6Q96NE9 622 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 MTA3Q9BTC8 594 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 TRIM55Q9BYV6 548 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 CNTN3Q9P232 1028 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 SOBPA7XYQ1 873 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 H7C1W4 665 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 IGHA1P01876 353 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 NASPP49321 788 aaPredicted RBP3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 FOXK2Q01167 660 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 ORC1Q13415 861 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 BRDTQ58F21 947 aaPredicted RBP3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 CYP2U1Q7Z449 544 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 CHMP7Q8WUX9 453 aaPredicted RBP3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 DNAJC7Q99615 494 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 ARPC5LQ9BPX5 153 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 ENAMQ9NRM1 1142 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 LRRC4BQ9NT99 713 aa3.53□□□□□ -1.84
SMARCAD1-206ENST00000509418 ITGA6P23229 1130 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 PTPN12Q05209 780 aaKnown RBP3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 SAFB2Q14151 953 aaKnown RBP eCLIP3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 C21orf62-AS1Q17RA5 79 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 WDR78Q5VTH9 848 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 ALG1LQ6GMV1 187 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 PI16Q6UXB8 463 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 LYSMD3Q7Z3D4 306 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 APPBP2Q92624 585 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 MKL1Q969V6 931 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 ZNF512BQ96KM6 892 aaPredicted RBP3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 CITED4Q96RK1 184 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 CEP89Q96ST8 783 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 ESF1Q9H501 851 aaKnown RBP3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 FBXO9Q9UK97 447 aaPredicted RBP3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 NSFL1CQ9UNZ2 370 aaKnown RBP3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 COMMD10Q9Y6G5 202 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 CCER2I3L3R5 266 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 OPLAHO14841 1288 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 KLF4O43474 513 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 STAU1O95793 577 aaKnown RBP3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 SLURP2P0DP57 97 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 RAB33AQ14088 237 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 C10orf62Q5T681 223 aaPredicted RBP3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 NBPF6Q5VWK0 638 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 KIAA0907Q7Z7F0 614 aaPredicted RBP3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 PNISRQ8TF01 805 aaKnown RBP3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 SCG3Q8WXD2 468 aaKnown RBP3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 ALKBH8Q96BT7 664 aaKnown RBP3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 SCARF2Q96GP6 870 aaPredicted RBP3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 NBPF4Q96M43 638 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 POLMQ9NP87 494 aaPredicted RBP3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 TYW1Q9NV66 732 aaKnown RBP3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 BSDC1Q9NW68 430 aaPredicted RBP3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 SIRPGQ9P1W8 387 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 LEMD3Q9Y2U8 911 aa3.52□□□□□ -1.85
SMARCAD1-206ENST00000509418 ITGAEP38570 1179 aa3.51□□□□□ -1.85
SMARCAD1-206ENST00000509418 SRSF11Q05519 484 aaKnown RBP3.51□□□□□ -1.85
SMARCAD1-206ENST00000509418 SQSTM1Q13501 440 aa3.51□□□□□ -1.85
SMARCAD1-206ENST00000509418 LBRQ14739 615 aaKnown RBP3.51□□□□□ -1.85
SMARCAD1-206ENST00000509418 DALRD3Q5D0E6 543 aaKnown RBP3.51□□□□□ -1.85
SMARCAD1-206ENST00000509418 TTC39BQ5VTQ0 682 aaPredicted RBP3.51□□□□□ -1.85
SMARCAD1-206ENST00000509418 PPP4R4Q6NUP7 873 aa3.51□□□□□ -1.85
SMARCAD1-206ENST00000509418 C16orf46Q6P387 395 aa3.51□□□□□ -1.85
SMARCAD1-206ENST00000509418 C14orf80Q86SX3 495 aa3.51□□□□□ -1.85
SMARCAD1-206ENST00000509418 RNF217Q8TC41 542 aa3.51□□□□□ -1.85
SMARCAD1-206ENST00000509418 MAP3K20Q9NYL2 800 aaKnown RBP3.51□□□□□ -1.85
SMARCAD1-206ENST00000509418 POLIQ9UNA4 740 aa3.51□□□□□ -1.85
SMARCAD1-206ENST00000509418 ERVH48-1M5A8F1 160 aa3.5□□□□□ -1.85
SMARCAD1-206ENST00000509418 LILRA1O75019 489 aa3.5□□□□□ -1.85
SMARCAD1-206ENST00000509418 ALDH1L1O75891 902 aa3.5□□□□□ -1.85
SMARCAD1-206ENST00000509418 GDF11O95390 407 aa3.5□□□□□ -1.85
SMARCAD1-206ENST00000509418 MAP3K10Q02779 954 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms