RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 TRIM34Q9BYJ4 488 aa10.26□□□□□ -0.77
CCSER1-208ENST00000509109 GGNBP2Q9H3C7 697 aa10.26□□□□□ -0.77
CCSER1-208ENST00000509109 MEGF6O75095 1541 aa10.26□□□□□ -0.77
CCSER1-208ENST00000509109 ZC3H4Q9UPT8 1303 aaKnown RBP10.26□□□□□ -0.77
CCSER1-208ENST00000509109 INSRP06213 1382 aa10.26□□□□□ -0.77
CCSER1-208ENST00000509109 LY75O60449 1722 aa10.25□□□□□ -0.77
CCSER1-208ENST00000509109 SLC15A2Q16348 729 aa10.25□□□□□ -0.77
CCSER1-208ENST00000509109 DDX54Q8TDD1 881 aaKnown RBP10.25□□□□□ -0.77
CCSER1-208ENST00000509109 RAPGEF4Q8WZA2 1011 aa10.25□□□□□ -0.77
CCSER1-208ENST00000509109 KIFC2Q96AC6 838 aa10.25□□□□□ -0.77
CCSER1-208ENST00000509109 SLC10A4Q96EP9 437 aa10.25□□□□□ -0.77
CCSER1-208ENST00000509109 ZFP42Q96MM3 310 aa10.25□□□□□ -0.77
CCSER1-208ENST00000509109 MAP4K5Q9Y4K4 846 aa10.25□□□□□ -0.77
CCSER1-208ENST00000509109 UTRNP46939 3433 aa10.24□□□□□ -0.77
CCSER1-208ENST00000509109 RRS1Q15050 365 aaKnown RBP10.24□□□□□ -0.77
CCSER1-208ENST00000509109 SLC27A3Q5K4L6 730 aa10.24□□□□□ -0.77
CCSER1-208ENST00000509109 MRPL14Q6P1L8 145 aaKnown RBP10.24□□□□□ -0.77
CCSER1-208ENST00000509109 ZCRB1Q8TBF4 217 aaKnown RBP10.24□□□□□ -0.77
CCSER1-208ENST00000509109 ADAM32Q8TC27 787 aa10.24□□□□□ -0.77
CCSER1-208ENST00000509109 PURBQ96QR8 312 aaKnown RBP10.24□□□□□ -0.77
CCSER1-208ENST00000509109 PKD1L3Q7Z443 1732 aa10.24□□□□□ -0.77
CCSER1-208ENST00000509109 HMGB2P26583 209 aaKnown RBP10.23□□□□□ -0.77
CCSER1-208ENST00000509109 PNMA1Q8ND90 353 aa10.23□□□□□ -0.77
CCSER1-208ENST00000509109 SYTL4Q96C24 671 aaPredicted RBP10.23□□□□□ -0.77
CCSER1-208ENST00000509109 MTFR1LQ9H019 292 aa10.23□□□□□ -0.77
CCSER1-208ENST00000509109 PCDH11XQ9BZA7 1347 aa10.23□□□□□ -0.77
CCSER1-208ENST00000509109 PCDH11YQ9BZA8 1340 aa10.23□□□□□ -0.77
CCSER1-208ENST00000509109 GOLGB1Q14789 3259 aaKnown RBP10.22□□□□□ -0.77
CCSER1-208ENST00000509109 MAP2P11137 1827 aaKnown RBP10.22□□□□□ -0.77
CCSER1-208ENST00000509109 TATP17735 454 aaPredicted RBP10.22□□□□□ -0.77
CCSER1-208ENST00000509109 CCDC116Q8IYX3 515 aa10.22□□□□□ -0.77
CCSER1-208ENST00000509109 CCER1Q8TC90 406 aaPredicted RBP10.22□□□□□ -0.77
CCSER1-208ENST00000509109 KCTD15Q96SI1 283 aaPredicted RBP10.22□□□□□ -0.77
CCSER1-208ENST00000509109 ZBTB7AO95365 584 aa10.21□□□□□ -0.77
CCSER1-208ENST00000509109 EIF4G2P78344 907 aaKnown RBP eCLIP10.21□□□□□ -0.77
CCSER1-208ENST00000509109 C6orf118Q5T5N4 469 aa10.21□□□□□ -0.77
CCSER1-208ENST00000509109 NBPF6Q5VWK0 638 aa10.21□□□□□ -0.77
CCSER1-208ENST00000509109 NBPF4Q96M43 638 aa10.21□□□□□ -0.77
CCSER1-208ENST00000509109 TUBGCP6Q96RT7 1819 aa10.21□□□□□ -0.78
CCSER1-208ENST00000509109 NSD2O96028 1365 aa10.2□□□□□ -0.78
CCSER1-208ENST00000509109 C5P01031 1676 aa10.2□□□□□ -0.78
CCSER1-208ENST00000509109 FBLN1P23142 703 aa10.2□□□□□ -0.78
CCSER1-208ENST00000509109 SCARF1Q14162 830 aa10.2□□□□□ -0.78
CCSER1-208ENST00000509109 HSP90AB2PQ58FF8 381 aa10.2□□□□□ -0.78
CCSER1-208ENST00000509109 POLR3GLQ9BT43 218 aa10.2□□□□□ -0.78
CCSER1-208ENST00000509109 PLEKHG2Q9H7P9 1386 aa10.2□□□□□ -0.78
CCSER1-208ENST00000509109 GPSM3Q9Y4H4 160 aa10.2□□□□□ -0.78
CCSER1-208ENST00000509109 NCAPD2Q15021 1401 aa10.19□□□□□ -0.78
CCSER1-208ENST00000509109 PPM1GO15355 546 aaPredicted RBP10.19□□□□□ -0.78
CCSER1-208ENST00000509109 RAB15P59190 212 aa10.19□□□□□ -0.78
CCSER1-208ENST00000509109 PPP1R26Q5T8A7 1209 aaPredicted RBP10.19□□□□□ -0.78
CCSER1-208ENST00000509109 TREML4Q6UXN2 200 aa10.19□□□□□ -0.78
CCSER1-208ENST00000509109 USHBP1Q8N6Y0 703 aa10.19□□□□□ -0.78
CCSER1-208ENST00000509109 EMILIN1Q9Y6C2 1016 aa10.19□□□□□ -0.78
CCSER1-208ENST00000509109 ITGB4P16144 1822 aa10.19□□□□□ -0.78
CCSER1-208ENST00000509109 WASHC2AQ641Q2 1341 aa10.18□□□□□ -0.78
CCSER1-208ENST00000509109 SOBPA7XYQ1 873 aa10.18□□□□□ -0.78
CCSER1-208ENST00000509109 DZIP3Q86Y13 1208 aaKnown RBP10.18□□□□□ -0.78
CCSER1-208ENST00000509109 SLC16A10Q8TF71 515 aa10.18□□□□□ -0.78
CCSER1-208ENST00000509109 PDGFDQ9GZP0 370 aaPredicted RBP10.18□□□□□ -0.78
CCSER1-208ENST00000509109 SNRKQ9NRH2 765 aa10.18□□□□□ -0.78
CCSER1-208ENST00000509109 COL24A1Q17RW2 1714 aa10.18□□□□□ -0.78
CCSER1-208ENST00000509109 TOGARAM1Q9Y4F4 1720 aa10.18□□□□□ -0.78
CCSER1-208ENST00000509109 MAP3K5Q99683 1374 aa10.17□□□□□ -0.78
CCSER1-208ENST00000509109 TAF1LQ8IZX4 1826 aa10.17□□□□□ -0.78
CCSER1-208ENST00000509109 ZNF827Q17R98 1081 aa10.17□□□□□ -0.78
CCSER1-208ENST00000509109 INTS6LQ5JSJ4 861 aaKnown RBP10.17□□□□□ -0.78
CCSER1-208ENST00000509109 LRRC4BQ9NT99 713 aa10.17□□□□□ -0.78
CCSER1-208ENST00000509109 TFCP2L1Q9NZI6 479 aa10.17□□□□□ -0.78
CCSER1-208ENST00000509109 CCNL1Q9UK58 526 aaPredicted RBP10.17□□□□□ -0.78
CCSER1-208ENST00000509109 CDV3Q9UKY7 258 aaKnown RBP10.17□□□□□ -0.78
CCSER1-208ENST00000509109 SPG7Q9UQ90 795 aa10.17□□□□□ -0.78
CCSER1-208ENST00000509109 WFS1O76024 890 aa10.16□□□□□ -0.78
CCSER1-208ENST00000509109 BMP2P12643 396 aa10.16□□□□□ -0.78
CCSER1-208ENST00000509109 POLD1P28340 1107 aa10.16□□□□□ -0.78
CCSER1-208ENST00000509109 CBLBQ13191 982 aa10.16□□□□□ -0.78
CCSER1-208ENST00000509109 MEIOBQ8N635 442 aa10.16□□□□□ -0.78
CCSER1-208ENST00000509109 MTMR14Q8NCE2 650 aa10.16□□□□□ -0.78
CCSER1-208ENST00000509109 ARXQ96QS3 562 aa10.16□□□□□ -0.78
CCSER1-208ENST00000509109 HSPA5P11021 654 aaKnown RBP10.15□□□□□ -0.78
CCSER1-208ENST00000509109 YY1P25490 414 aa10.15□□□□□ -0.78
CCSER1-208ENST00000509109 NFX1Q12986 1120 aaKnown RBP10.15□□□□□ -0.78
CCSER1-208ENST00000509109 LINC00528Q8N1L1 170 aa10.15□□□□□ -0.78
CCSER1-208ENST00000509109 BANK1Q8NDB2 785 aa10.15□□□□□ -0.78
CCSER1-208ENST00000509109 SMARCC1Q92922 1105 aaPredicted RBP10.15□□□□□ -0.78
CCSER1-208ENST00000509109 FHDC1Q9C0D6 1143 aaPredicted RBP10.15□□□□□ -0.78
CCSER1-208ENST00000509109 PALLDQ8WX93 1383 aa10.14□□□□□ -0.79
CCSER1-208ENST00000509109 PNPLA7Q6ZV29 1317 aa10.14□□□□□ -0.79
CCSER1-208ENST00000509109 C4BP0C0L5 1744 aa10.14□□□□□ -0.79
CCSER1-208ENST00000509109 CHD4Q14839 1912 aa10.14□□□□□ -0.79
CCSER1-208ENST00000509109 TERTO14746 1132 aaKnown RBP10.14□□□□□ -0.79
CCSER1-208ENST00000509109 UPP2O95045 317 aa10.14□□□□□ -0.79
CCSER1-208ENST00000509109 VEGFBP49765 207 aa10.14□□□□□ -0.79
CCSER1-208ENST00000509109 LCE2AQ5TA79 106 aaPredicted RBP10.14□□□□□ -0.79
CCSER1-208ENST00000509109 PGPEP1Q9NXJ5 209 aa10.14□□□□□ -0.79
CCSER1-208ENST00000509109 ZBBXA8MT70 800 aa10.13□□□□□ -0.79
CCSER1-208ENST00000509109 CYP27B1O15528 508 aa10.13□□□□□ -0.79
CCSER1-208ENST00000509109 FBXO45P0C2W1 286 aa10.13□□□□□ -0.79
CCSER1-208ENST00000509109 NBPF20Q3BBV1 942 aa10.13□□□□□ -0.79
CCSER1-208ENST00000509109 MPRIPQ6WCQ1 1025 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms