RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, humanhuman

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-208ENST00000508492 FLAD1Q8NFF5 587 aa10.38□□□□□ -0.75
SH3D19-208ENST00000508492 CFAP53Q96M91 514 aa10.38□□□□□ -0.75
SH3D19-208ENST00000508492 HMX1Q9NP08 348 aaPredicted RBP10.38□□□□□ -0.75
SH3D19-208ENST00000508492 SRP68Q9UHB9 627 aaKnown RBP10.38□□□□□ -0.75
SH3D19-208ENST00000508492 ARFGEF1Q9Y6D6 1849 aa10.37□□□□□ -0.75
SH3D19-208ENST00000508492 DLEC1Q9Y238 1755 aa10.37□□□□□ -0.75
SH3D19-208ENST00000508492 KCNQ3O43525 872 aa10.37□□□□□ -0.75
SH3D19-208ENST00000508492 RPS6KA4O75676 772 aa10.37□□□□□ -0.75
SH3D19-208ENST00000508492 U2AF1L5P0DN76 240 aaPredicted RBP10.37□□□□□ -0.75
SH3D19-208ENST00000508492 U2AF1Q01081 240 aaKnown RBP eCLIP10.37□□□□□ -0.75
SH3D19-208ENST00000508492 DCTN1Q14203 1278 aa10.37□□□□□ -0.75
SH3D19-208ENST00000508492 CCDC88AQ3V6T2 1871 aa10.37□□□□□ -0.75
SH3D19-208ENST00000508492 INTS5Q6P9B9 1019 aaKnown RBP10.37□□□□□ -0.75
SH3D19-208ENST00000508492 TRIM34Q9BYJ4 488 aa10.37□□□□□ -0.75
SH3D19-208ENST00000508492 NRXN2Q9P2S2 1712 aa10.37□□□□□ -0.75
SH3D19-208ENST00000508492 TSR3Q9UJK0 312 aaKnown RBP10.37□□□□□ -0.75
SH3D19-208ENST00000508492 HPS5Q9UPZ3 1129 aa10.37□□□□□ -0.75
SH3D19-208ENST00000508492 SLC27A5Q9Y2P5 690 aa10.37□□□□□ -0.75
SH3D19-208ENST00000508492 RTCBQ9Y3I0 505 aaKnown RBP10.37□□□□□ -0.75
SH3D19-208ENST00000508492 GNAT3A8MTJ3 354 aa10.36□□□□□ -0.75
SH3D19-208ENST00000508492 MMP10P09238 476 aa10.36□□□□□ -0.75
SH3D19-208ENST00000508492 GYS1P13807 737 aa10.36□□□□□ -0.75
SH3D19-208ENST00000508492 PUS10Q3MIT2 529 aaKnown RBP10.36□□□□□ -0.75
SH3D19-208ENST00000508492 RC3H1Q5TC82 1133 aaKnown RBP10.36□□□□□ -0.75
SH3D19-208ENST00000508492 ANKRD13DQ6ZTN6 518 aa10.36□□□□□ -0.75
SH3D19-208ENST00000508492 LRRN4Q8WUT4 740 aa10.36□□□□□ -0.75
SH3D19-208ENST00000508492 SYMPKQ92797 1274 aaKnown RBP10.36□□□□□ -0.75
SH3D19-208ENST00000508492 SALL2Q9Y467 1007 aaPredicted RBP10.36□□□□□ -0.75
SH3D19-208ENST00000508492 GOLGB1Q14789 3259 aaKnown RBP10.36□□□□□ -0.75
SH3D19-208ENST00000508492 CEMIPQ8WUJ3 1361 aa10.36□□□□□ -0.75
SH3D19-208ENST00000508492 COL11A2P13942 1736 aaPredicted RBP10.36□□□□□ -0.75
SH3D19-208ENST00000508492 CYP19A1P11511 503 aaPredicted RBP10.35□□□□□ -0.75
SH3D19-208ENST00000508492 GPR162Q16538 588 aa10.35□□□□□ -0.75
SH3D19-208ENST00000508492 TRAPPC3LQ5T215 181 aa10.35□□□□□ -0.75
SH3D19-208ENST00000508492 MCM10Q7L590 875 aa10.35□□□□□ -0.75
SH3D19-208ENST00000508492 GAS2L2Q8NHY3 880 aa10.35□□□□□ -0.75
SH3D19-208ENST00000508492 ZNF496Q96IT1 587 aaPredicted RBP10.35□□□□□ -0.75
SH3D19-208ENST00000508492 CALR3Q96L12 384 aaKnown RBP10.35□□□□□ -0.75
SH3D19-208ENST00000508492 ZBTB1Q9Y2K1 713 aa10.35□□□□□ -0.75
SH3D19-208ENST00000508492 PXDNLA1KZ92 1463 aa10.35□□□□□ -0.75
SH3D19-208ENST00000508492 SOS1Q07889 1333 aaPredicted RBP10.34□□□□□ -0.75
SH3D19-208ENST00000508492 C10orf71Q711Q0 1435 aa10.34□□□□□ -0.75
SH3D19-208ENST00000508492 SBF1O95248 1867 aa10.34□□□□□ -0.75
SH3D19-208ENST00000508492 IRF5Q13568 498 aa10.34□□□□□ -0.75
SH3D19-208ENST00000508492 PNMA1Q8ND90 353 aa10.34□□□□□ -0.75
SH3D19-208ENST00000508492 WNT2BQ93097 391 aa10.34□□□□□ -0.75
SH3D19-208ENST00000508492 CCDC87Q9NVE4 849 aa10.34□□□□□ -0.75
SH3D19-208ENST00000508492 USP42Q9H9J4 1324 aaKnown RBP10.33□□□□□ -0.76
SH3D19-208ENST00000508492 NUP98P52948 1817 aa10.33□□□□□ -0.76
SH3D19-208ENST00000508492 PRAMEF22A3QJZ6 481 aa10.33□□□□□ -0.76
SH3D19-208ENST00000508492 NR1I2O75469 434 aa10.33□□□□□ -0.76
SH3D19-208ENST00000508492 RFC4P35249 363 aa10.33□□□□□ -0.76
SH3D19-208ENST00000508492 PIP4K2AP48426 406 aaPredicted RBP10.33□□□□□ -0.76
SH3D19-208ENST00000508492 DDR1Q08345 913 aa10.33□□□□□ -0.76
SH3D19-208ENST00000508492 TEFQ10587 303 aa10.33□□□□□ -0.76
SH3D19-208ENST00000508492 GLMNQ92990 594 aa10.33□□□□□ -0.76
SH3D19-208ENST00000508492 NUDCQ9Y266 331 aa10.33□□□□□ -0.76
SH3D19-208ENST00000508492 COL15A1P39059 1388 aa10.33□□□□□ -0.76
SH3D19-208ENST00000508492 HEG1Q9ULI3 1381 aa10.33□□□□□ -0.76
SH3D19-208ENST00000508492 CANXP27824 592 aaKnown RBP10.32□□□□□ -0.76
SH3D19-208ENST00000508492 BCAMP50895 628 aa10.32□□□□□ -0.76
SH3D19-208ENST00000508492 APLP1P51693 650 aa10.32□□□□□ -0.76
SH3D19-208ENST00000508492 ZNF790Q6PG37 636 aa10.32□□□□□ -0.76
SH3D19-208ENST00000508492 PLEKHF1Q96S99 279 aa10.32□□□□□ -0.76
SH3D19-208ENST00000508492 USB1Q9BQ65 265 aaKnown RBP10.32□□□□□ -0.76
SH3D19-208ENST00000508492 THUMPD2Q9BTF0 503 aaKnown RBP10.32□□□□□ -0.76
SH3D19-208ENST00000508492 PCDHB3Q9Y5E6 796 aa10.32□□□□□ -0.76
SH3D19-208ENST00000508492 CD2APQ9Y5K6 639 aa10.32□□□□□ -0.76
SH3D19-208ENST00000508492 POM121CA8CG34 1229 aa10.31□□□□□ -0.76
SH3D19-208ENST00000508492 GPR37L1O60883 481 aa10.31□□□□□ -0.76
SH3D19-208ENST00000508492 USPL1Q5W0Q7 1092 aa10.31□□□□□ -0.76
SH3D19-208ENST00000508492 TTC5Q8N0Z6 440 aa10.31□□□□□ -0.76
SH3D19-208ENST00000508492 MIS18AQ9NYP9 233 aa10.31□□□□□ -0.76
SH3D19-208ENST00000508492 CARMIL3Q8ND23 1372 aa10.3□□□□□ -0.76
SH3D19-208ENST00000508492 BTBD11A6QL63 1104 aa10.3□□□□□ -0.76
SH3D19-208ENST00000508492 FMNL1O95466 1100 aaPredicted RBP10.3□□□□□ -0.76
SH3D19-208ENST00000508492 A1BGP04217 495 aa10.3□□□□□ -0.76
SH3D19-208ENST00000508492 HMGB2P26583 209 aaKnown RBP10.3□□□□□ -0.76
SH3D19-208ENST00000508492 BRICD5Q6PL45 260 aa10.3□□□□□ -0.76
SH3D19-208ENST00000508492 LYPD8Q6UX82 237 aa10.3□□□□□ -0.76
SH3D19-208ENST00000508492 RNF19BQ6ZMZ0 732 aa10.3□□□□□ -0.76
SH3D19-208ENST00000508492 ZNF784Q8NCA9 323 aaPredicted RBP10.3□□□□□ -0.76
SH3D19-208ENST00000508492 A0A0G2JLW4 131 aa10.29□□□□□ -0.76
SH3D19-208ENST00000508492 BLOC1S3Q6QNY0 202 aa10.29□□□□□ -0.76
SH3D19-208ENST00000508492 NLGN1Q8N2Q7 840 aa10.29□□□□□ -0.76
SH3D19-208ENST00000508492 ARFGEF2Q9Y6D5 1785 aa10.29□□□□□ -0.76
SH3D19-208ENST00000508492 POLRMTO00411 1230 aaKnown RBP10.28□□□□□ -0.76
SH3D19-208ENST00000508492 DPEP1P16444 411 aa10.28□□□□□ -0.76
SH3D19-208ENST00000508492 NFIXQ14938 502 aa10.28□□□□□ -0.76
SH3D19-208ENST00000508492 NR6A1Q15406 480 aa10.28□□□□□ -0.76
SH3D19-208ENST00000508492 SCUBE3Q8IX30 993 aa10.28□□□□□ -0.76
SH3D19-208ENST00000508492 RTF1Q92541 710 aaKnown RBP10.28□□□□□ -0.76
SH3D19-208ENST00000508492 USP16Q9Y5T5 823 aa10.28□□□□□ -0.76
SH3D19-208ENST00000508492 PARP3Q9Y6F1 533 aa10.28□□□□□ -0.76
SH3D19-208ENST00000508492 MYBBP1AQ9BQG0 1328 aaKnown RBP10.28□□□□□ -0.76
SH3D19-208ENST00000508492 TNRC6CQ9HCJ0 1690 aaKnown RBP10.28□□□□□ -0.76
SH3D19-208ENST00000508492 ANKRD36CQ5JPF3 1778 aa10.27□□□□□ -0.77
SH3D19-208ENST00000508492 TM4SF1P30408 202 aa10.27□□□□□ -0.77
SH3D19-208ENST00000508492 SOX11P35716 441 aa10.27□□□□□ -0.77
SH3D19-208ENST00000508492 EIF5P55010 431 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms