RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ZNF394Q53GI3 561 aa9.1□□□□□ -0.95
CLCN3-206ENST00000507875 KLHL42Q9P2K6 505 aa9.1□□□□□ -0.95
CLCN3-206ENST00000507875 RGPD1P0DJD0 1748 aa9.09□□□□□ -0.95
CLCN3-206ENST00000507875 LZTS3O60299 673 aaPredicted RBP9.09□□□□□ -0.95
CLCN3-206ENST00000507875 TCEAL1Q15170 157 aa9.09□□□□□ -0.95
CLCN3-206ENST00000507875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.09□□□□□ -0.95
CLCN3-206ENST00000507875 SPACA7Q96KW9 195 aa9.09□□□□□ -0.95
CLCN3-206ENST00000507875 SAP130Q9H0E3 1048 aa9.09□□□□□ -0.95
CLCN3-206ENST00000507875 SOS2Q07890 1332 aaPredicted RBP9.09□□□□□ -0.95
CLCN3-206ENST00000507875 FAM208AQ9UK61 1670 aaKnown RBP9.09□□□□□ -0.95
CLCN3-206ENST00000507875 MTHFSP49914 203 aa9.09□□□□□ -0.95
CLCN3-206ENST00000507875 EGFLAMQ63HQ2 1017 aa9.09□□□□□ -0.95
CLCN3-206ENST00000507875 DESI1Q6ICB0 168 aa9.09□□□□□ -0.95
CLCN3-206ENST00000507875 NME9Q86XW9 330 aa9.09□□□□□ -0.95
CLCN3-206ENST00000507875 KCNH5Q8NCM2 988 aa9.09□□□□□ -0.95
CLCN3-206ENST00000507875 ZSWIM4Q9H7M6 989 aa9.09□□□□□ -0.95
CLCN3-206ENST00000507875 DMGDHQ9UI17 866 aaKnown RBP9.09□□□□□ -0.95
CLCN3-206ENST00000507875 NOD1Q9Y239 953 aa9.09□□□□□ -0.95
CLCN3-206ENST00000507875 PXDNQ92626 1479 aa9.08□□□□□ -0.96
CLCN3-206ENST00000507875 TLDC2A0PJX2 215 aa9.08□□□□□ -0.96
CLCN3-206ENST00000507875 TREHO43280 583 aa9.08□□□□□ -0.96
CLCN3-206ENST00000507875 PDE3BQ13370 1112 aa9.08□□□□□ -0.96
CLCN3-206ENST00000507875 PPP4R3BQ5MIZ7 849 aa9.08□□□□□ -0.96
CLCN3-206ENST00000507875 PPP1R18Q6NYC8 613 aa9.08□□□□□ -0.96
CLCN3-206ENST00000507875 JAZF1Q86VZ6 243 aa9.08□□□□□ -0.96
CLCN3-206ENST00000507875 DDX17Q92841 729 aaKnown RBP9.08□□□□□ -0.96
CLCN3-206ENST00000507875 PCDHGA11Q9Y5H2 935 aa9.08□□□□□ -0.96
CLCN3-206ENST00000507875 NFAT5O94916 1531 aa9.08□□□□□ -0.96
CLCN3-206ENST00000507875 LDHBP07195 334 aaKnown RBP9.08□□□□□ -0.96
CLCN3-206ENST00000507875 ARHGEF10O15013 1369 aa9.08□□□□□ -0.96
CLCN3-206ENST00000507875 PEAK1Q9H792 1746 aa9.07□□□□□ -0.96
CLCN3-206ENST00000507875 FOXO3O43524 673 aa9.07□□□□□ -0.96
CLCN3-206ENST00000507875 IGHA2P01877 340 aa9.07□□□□□ -0.96
CLCN3-206ENST00000507875 ATP2B1P20020 1258 aa9.07□□□□□ -0.96
CLCN3-206ENST00000507875 ANAPC15P60006 121 aa9.07□□□□□ -0.96
CLCN3-206ENST00000507875 POTEAQ6S8J7 498 aa9.07□□□□□ -0.96
CLCN3-206ENST00000507875 EMILIN1Q9Y6C2 1016 aa9.07□□□□□ -0.96
CLCN3-206ENST00000507875 WEE1P30291 646 aa9.07□□□□□ -0.96
CLCN3-206ENST00000507875 PSEN2P49810 448 aa9.07□□□□□ -0.96
CLCN3-206ENST00000507875 KRT28Q7Z3Y7 464 aa9.07□□□□□ -0.96
CLCN3-206ENST00000507875 POLKQ9UBT6 870 aa9.07□□□□□ -0.96
CLCN3-206ENST00000507875 METRNQ9UJH8 293 aa9.07□□□□□ -0.96
CLCN3-206ENST00000507875 DOLKQ9UPQ8 538 aa9.07□□□□□ -0.96
CLCN3-206ENST00000507875 TMA7Q9Y2S6 64 aaKnown RBP9.07□□□□□ -0.96
CLCN3-206ENST00000507875 USP19O94966 1318 aa9.07□□□□□ -0.96
CLCN3-206ENST00000507875 TNS3Q68CZ2 1445 aa9.07□□□□□ -0.96
CLCN3-206ENST00000507875 LRP6O75581 1613 aa9.07□□□□□ -0.96
CLCN3-206ENST00000507875 GPR182O15218 404 aa9.06□□□□□ -0.96
CLCN3-206ENST00000507875 DIAPH1O60610 1272 aaKnown RBP9.06□□□□□ -0.96
CLCN3-206ENST00000507875 FMR1Q06787 632 aaKnown RBP eCLIP9.06□□□□□ -0.967e-6■■□□□ 12.8
CLCN3-206ENST00000507875 GRIPAP1Q4V328 841 aa9.06□□□□□ -0.96
CLCN3-206ENST00000507875 SDE2Q6IQ49 451 aa9.06□□□□□ -0.96
CLCN3-206ENST00000507875 ABCA3Q99758 1704 aa9.06□□□□□ -0.96
CLCN3-206ENST00000507875 COL22A1Q8NFW1 1626 aaPredicted RBP9.06□□□□□ -0.96
CLCN3-206ENST00000507875 FLT4P35916 1363 aa9.06□□□□□ -0.96
CLCN3-206ENST00000507875 RACK1P63244 317 aaKnown RBP9.06□□□□□ -0.96
CLCN3-206ENST00000507875 CHMP4BQ9H444 224 aaKnown RBP9.06□□□□□ -0.96
CLCN3-206ENST00000507875 CCSER2Q9H7U1 834 aa9.06□□□□□ -0.96
CLCN3-206ENST00000507875 PLEKHG2Q9H7P9 1386 aa9.05□□□□□ -0.96
CLCN3-206ENST00000507875 ATP1A2P50993 1020 aa9.05□□□□□ -0.96
CLCN3-206ENST00000507875 XPCQ01831 940 aaPredicted RBP9.05□□□□□ -0.96
CLCN3-206ENST00000507875 ABTB2Q8N961 1025 aa9.05□□□□□ -0.96
CLCN3-206ENST00000507875 CAMTA1Q9Y6Y1 1673 aa9.05□□□□□ -0.96
CLCN3-206ENST00000507875 GIGYF1O75420 1035 aaPredicted RBP9.05□□□□□ -0.96
CLCN3-206ENST00000507875 BMS1Q14692 1282 aaKnown RBP9.05□□□□□ -0.96
CLCN3-206ENST00000507875 NOP9Q86U38 636 aaKnown RBP9.05□□□□□ -0.96
CLCN3-206ENST00000507875 RUNDC1Q96C34 613 aa9.05□□□□□ -0.96
CLCN3-206ENST00000507875 NGLY1Q96IV0 654 aa9.05□□□□□ -0.96
CLCN3-206ENST00000507875 VTI1BQ9UEU0 232 aa9.05□□□□□ -0.96
CLCN3-206ENST00000507875 ADAMTS8Q9UP79 889 aa9.05□□□□□ -0.96
CLCN3-206ENST00000507875 AFF2P51816 1311 aa9.04□□□□□ -0.96
CLCN3-206ENST00000507875 RXRBP28702 533 aa9.04□□□□□ -0.96
CLCN3-206ENST00000507875 FAM26DQ5JW98 314 aa9.04□□□□□ -0.96
CLCN3-206ENST00000507875 ZBED2Q9BTP6 218 aa9.04□□□□□ -0.96
CLCN3-206ENST00000507875 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.04□□□□□ -0.96
CLCN3-206ENST00000507875 MRPL42Q9Y6G3 142 aaKnown RBP9.04□□□□□ -0.96
CLCN3-206ENST00000507875 LOC102724159A0A0B4J2E5 919 aa9.04□□□□□ -0.96
CLCN3-206ENST00000507875 ADAMTS2O95450 1211 aa9.04□□□□□ -0.96
CLCN3-206ENST00000507875 EHHADHQ08426 723 aa9.04□□□□□ -0.96
CLCN3-206ENST00000507875 PWP2Q15269 919 aaKnown RBP9.04□□□□□ -0.96
CLCN3-206ENST00000507875 RNF34Q969K3 372 aa9.04□□□□□ -0.96
CLCN3-206ENST00000507875 DSC3Q14574 896 aa9.03□□□□□ -0.96
CLCN3-206ENST00000507875 ERICH6BQ5W0A0 696 aa9.03□□□□□ -0.96
CLCN3-206ENST00000507875 TRIM50Q86XT4 487 aa9.03□□□□□ -0.96
CLCN3-206ENST00000507875 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.03□□□□□ -0.96
CLCN3-206ENST00000507875 HELQQ8TDG4 1101 aa9.03□□□□□ -0.96
CLCN3-206ENST00000507875 USB1Q9BQ65 265 aaKnown RBP9.03□□□□□ -0.96
CLCN3-206ENST00000507875 TGIF2Q9GZN2 237 aa9.03□□□□□ -0.96
CLCN3-206ENST00000507875 COL18A1P39060 1754 aa9.03□□□□□ -0.96
CLCN3-206ENST00000507875 SPATA31A3Q5VYP0 1347 aa9.03□□□□□ -0.96
CLCN3-206ENST00000507875 HAX1O00165 279 aa9.03□□□□□ -0.96
CLCN3-206ENST00000507875 SORBS3O60504 671 aa9.03□□□□□ -0.96
CLCN3-206ENST00000507875 TNNT2P45379 298 aaPredicted RBP9.03□□□□□ -0.96
CLCN3-206ENST00000507875 SF3B2Q13435 895 aaKnown RBP9.03□□□□□ -0.96
CLCN3-206ENST00000507875 MAP7D1Q3KQU3 841 aa9.03□□□□□ -0.96
CLCN3-206ENST00000507875 SGSM3Q96HU1 749 aa9.03□□□□□ -0.96
CLCN3-206ENST00000507875 RBCK1Q9BYM8 510 aa9.03□□□□□ -0.96
CLCN3-206ENST00000507875 NEFMP07197 916 aa9.02□□□□□ -0.97
CLCN3-206ENST00000507875 OS9Q13438 667 aaPredicted RBP9.02□□□□□ -0.97
CLCN3-206ENST00000507875 ATCAYQ86WG3 371 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 343.3 ms