RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 BRD7Q9NPI1 651 aa4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 CUEDC1Q9NWM3 386 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 ABI2Q9NYB9 513 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 DYRK1BQ9Y463 629 aa4.95□□□□□ -1.62
TRAPPC11-205ENST00000506426 SENP3-EIF4A1A0A087X0R7 540 aa4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 ADAM23O75077 832 aa4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 CES1P23141 567 aa4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 ST13P50502 369 aaKnown RBP4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 PTPN12Q05209 780 aaKnown RBP4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 GAS6Q14393 721 aa4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 PLA2G4EQ3MJ16 856 aa4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 EFHC2Q5JST6 749 aa4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 SAMD5Q5TGI4 173 aa4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 NXPE4Q6UWF7 544 aa4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 SV2AQ7L0J3 742 aa4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 GAS2L1Q99501 681 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 TINF2Q9BSI4 451 aa4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 BCO2Q9BYV7 579 aa4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 ACBD3Q9H3P7 528 aa4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 NPHS2Q9NP85 383 aa4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 CNTN3Q9P232 1028 aa4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 GGT7Q9UJ14 662 aa4.94□□□□□ -1.62
TRAPPC11-205ENST00000506426 EREGO14944 169 aa4.93□□□□□ -1.62
TRAPPC11-205ENST00000506426 IGHA1P01876 353 aa4.93□□□□□ -1.62
TRAPPC11-205ENST00000506426 USP17L7P0C7H9 530 aa4.93□□□□□ -1.62
TRAPPC11-205ENST00000506426 GRNP28799 593 aaKnown RBP4.93□□□□□ -1.62
TRAPPC11-205ENST00000506426 KCNQ4P56696 695 aa4.93□□□□□ -1.62
TRAPPC11-205ENST00000506426 LBRQ14739 615 aaKnown RBP4.93□□□□□ -1.62
TRAPPC11-205ENST00000506426 USP48Q86UV5 1035 aa4.93□□□□□ -1.62
TRAPPC11-205ENST00000506426 SPOCK3Q9BQ16 436 aa4.93□□□□□ -1.62
TRAPPC11-205ENST00000506426 KRTAP4-8Q9BYQ9 185 aa4.93□□□□□ -1.62
TRAPPC11-205ENST00000506426 ZCCHC2Q9C0B9 1178 aaKnown RBP4.93□□□□□ -1.62
TRAPPC11-205ENST00000506426 CHRDQ9H2X0 955 aa4.93□□□□□ -1.62
TRAPPC11-205ENST00000506426 SUV39H2Q9H5I1 410 aa4.93□□□□□ -1.62
TRAPPC11-205ENST00000506426 PRKAG2Q9UGJ0 569 aa4.93□□□□□ -1.62
TRAPPC11-205ENST00000506426 DDX41Q9UJV9 622 aaKnown RBP4.93□□□□□ -1.62
TRAPPC11-205ENST00000506426 KCNH4Q9UQ05 1017 aa4.93□□□□□ -1.62
TRAPPC11-205ENST00000506426 INPP5FQ9Y2H2 1132 aa4.93□□□□□ -1.62
TRAPPC11-205ENST00000506426 CELA2BP08218 269 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-205ENST00000506426 EDN3P14138 238 aa4.92□□□□□ -1.62
TRAPPC11-205ENST00000506426 ATP2B1P20020 1258 aa4.92□□□□□ -1.62
TRAPPC11-205ENST00000506426 GSTT1P30711 240 aa4.92□□□□□ -1.62
TRAPPC11-205ENST00000506426 ZNF394Q53GI3 561 aa4.92□□□□□ -1.62
TRAPPC11-205ENST00000506426 MEI1Q5TIA1 1274 aa4.92□□□□□ -1.62
TRAPPC11-205ENST00000506426 KIAA0319Q5VV43 1072 aa4.92□□□□□ -1.62
TRAPPC11-205ENST00000506426 KANK3Q6NY19 840 aa4.92□□□□□ -1.62
TRAPPC11-205ENST00000506426 FIGNL1Q6PIW4 674 aa4.92□□□□□ -1.62
TRAPPC11-205ENST00000506426 VPS37DQ86XT2 251 aa4.92□□□□□ -1.62
TRAPPC11-205ENST00000506426 DCAF5Q96JK2 942 aa4.92□□□□□ -1.62
TRAPPC11-205ENST00000506426 TRAK1Q9UPV9 953 aa4.92□□□□□ -1.62
TRAPPC11-205ENST00000506426 CCDC180Q9P1Z9 1646 aa4.92□□□□□ -1.62
TRAPPC11-205ENST00000506426 PHF20L1A8MW92 1017 aa4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 MSTNO14793 375 aa4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 ATXN7O15265 892 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 SASH3O75995 380 aa4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 PROCP04070 461 aa4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 TNNI2P48788 182 aa4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 RACK1P63244 317 aaKnown RBP4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 ARID5AQ03989 594 aa4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 CCINQ13939 588 aa4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 GRM2Q14416 872 aa4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 SCARF2Q96GP6 870 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 GMLQ99445 158 aa4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 GSX2Q9BZM3 304 aa4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 EHD4Q9H223 541 aa4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 SRA1Q9HD15 236 aaKnown RBP4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 PCDHGB7Q9Y5F8 929 aa4.91□□□□□ -1.62
TRAPPC11-205ENST00000506426 GPR25O00155 361 aa4.9□□□□□ -1.63
TRAPPC11-205ENST00000506426 FAM157BP0CG42 384 aa4.9□□□□□ -1.63
TRAPPC11-205ENST00000506426 TARSP26639 723 aaKnown RBP4.9□□□□□ -1.63
TRAPPC11-205ENST00000506426 DNAJA1P31689 397 aaKnown RBP4.9□□□□□ -1.63
TRAPPC11-205ENST00000506426 SFSWAPQ12872 951 aaKnown RBP4.9□□□□□ -1.63
TRAPPC11-205ENST00000506426 LAMC2Q13753 1193 aa4.9□□□□□ -1.63
TRAPPC11-205ENST00000506426 RIPOR1Q6ZS17 1223 aa4.9□□□□□ -1.63
TRAPPC11-205ENST00000506426 KRT25Q7Z3Z0 450 aa4.9□□□□□ -1.63
TRAPPC11-205ENST00000506426 OR13H1Q8NG92 308 aa4.9□□□□□ -1.63
TRAPPC11-205ENST00000506426 ARMC5Q96C12 935 aa4.9□□□□□ -1.63
TRAPPC11-205ENST00000506426 PNMA5Q96PV4 448 aa4.9□□□□□ -1.63
TRAPPC11-205ENST00000506426 NOC4LQ9BVI4 516 aaKnown RBP4.9□□□□□ -1.63
TRAPPC11-205ENST00000506426 EFCC1Q9HA90 598 aa4.9□□□□□ -1.63
TRAPPC11-205ENST00000506426 PCDHGC4Q9Y5F7 938 aa4.9□□□□□ -1.63
TRAPPC11-205ENST00000506426 A0A1W2PP55 124 aa4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 H7C1W4 665 aa4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 KHNYNO15037 678 aaKnown RBP4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 EFSO43281 561 aa4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 MMP20O60882 483 aa4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 CYP2E1P05181 493 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 RARAP10276 462 aa4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 XRCC5P13010 732 aaKnown RBP4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 GTF2F1P35269 517 aaKnown RBP eCLIP4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 PWP1Q13610 501 aa4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 ERMP1Q7Z2K6 904 aa4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 RELL1Q8IUW5 271 aa4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 RSRP1Q9BUV0 290 aa4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 ZFYVE1Q9HBF4 777 aa4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 KANSL3Q9P2N6 904 aa4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 SALL4Q9UJQ4 1053 aa4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 TTF2Q9UNY4 1162 aaKnown RBP4.89□□□□□ -1.63
TRAPPC11-205ENST00000506426 PSAPP07602 524 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms