RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 PI4K2BQ8TCG2 481 aa12.39□□□□□ -0.43
DDX41-203ENST00000504781 ZNF594Q96JF6 807 aaPredicted RBP12.39□□□□□ -0.43
DDX41-203ENST00000504781 CDC5LQ99459 802 aaKnown RBP12.39□□□□□ -0.43
DDX41-203ENST00000504781 BCL11AQ9H165 835 aa12.39□□□□□ -0.43
DDX41-203ENST00000504781 MROH5Q6ZUA9 1318 aa12.38□□□□□ -0.43
DDX41-203ENST00000504781 UBR3Q6ZT12 1888 aa12.38□□□□□ -0.43
DDX41-203ENST00000504781 MMP10P09238 476 aa12.38□□□□□ -0.43
DDX41-203ENST00000504781 ATP5JP18859 108 aa12.38□□□□□ -0.43
DDX41-203ENST00000504781 MPHOSPH8Q99549 860 aa12.38□□□□□ -0.43
DDX41-203ENST00000504781 PUS3Q9BZE2 481 aaKnown RBP12.38□□□□□ -0.43
DDX41-203ENST00000504781 CCDC8Q9H0W5 538 aaPredicted RBP12.38□□□□□ -0.43
DDX41-203ENST00000504781 CNNM1Q9NRU3 951 aa12.38□□□□□ -0.43
DDX41-203ENST00000504781 IGHMBP2P38935 993 aaKnown RBP12.37□□□□□ -0.43
DDX41-203ENST00000504781 TIMM10P62072 90 aa12.37□□□□□ -0.43
DDX41-203ENST00000504781 CNTROBQ8N137 903 aa12.37□□□□□ -0.43
DDX41-203ENST00000504781 EVI5LQ96CN4 794 aa12.37□□□□□ -0.43
DDX41-203ENST00000504781 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.37□□□□□ -0.43
DDX41-203ENST00000504781 CARMIL3Q8ND23 1372 aa12.37□□□□□ -0.43
DDX41-203ENST00000504781 SCN7AQ01118 1682 aa12.36□□□□□ -0.43
DDX41-203ENST00000504781 TRIM6-TRIM34B2RNG4 842 aa12.36□□□□□ -0.43
DDX41-203ENST00000504781 PDE8BO95263 885 aa12.36□□□□□ -0.43
DDX41-203ENST00000504781 SEC24BO95487 1268 aa12.36□□□□□ -0.43
DDX41-203ENST00000504781 SERPINB2P05120 415 aa12.36□□□□□ -0.43
DDX41-203ENST00000504781 TBC1D9Q6ZT07 1266 aa12.36□□□□□ -0.43
DDX41-203ENST00000504781 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDX41-203ENST00000504781 RILPL2Q969X0 211 aa12.36□□□□□ -0.43
DDX41-203ENST00000504781 NEUROD6Q96NK8 337 aa12.36□□□□□ -0.43
DDX41-203ENST00000504781 BSDC1Q9NW68 430 aaPredicted RBP12.36□□□□□ -0.43
DDX41-203ENST00000504781 A0A1B0GUL7 405 aa12.35□□□□□ -0.43
DDX41-203ENST00000504781 HIP1O00291 1037 aa12.35□□□□□ -0.43
DDX41-203ENST00000504781 NPHP1O15259 732 aa12.35□□□□□ -0.43
DDX41-203ENST00000504781 EPB41L2O43491 1005 aaKnown RBP12.35□□□□□ -0.43
DDX41-203ENST00000504781 RPS8P62241 208 aaKnown RBP12.35□□□□□ -0.43
DDX41-203ENST00000504781 METTL24Q5JXM2 366 aa12.35□□□□□ -0.43
DDX41-203ENST00000504781 CCDC158Q5M9N0 1113 aa12.35□□□□□ -0.43
DDX41-203ENST00000504781 ANKRD18AQ8IVF6 992 aa12.35□□□□□ -0.43
DDX41-203ENST00000504781 CCDC85AQ96PX6 553 aaPredicted RBP12.35□□□□□ -0.43
DDX41-203ENST00000504781 DBNLQ9UJU6 430 aaKnown RBP12.35□□□□□ -0.43
DDX41-203ENST00000504781 GOLGB1Q14789 3259 aaKnown RBP12.35□□□□□ -0.43
DDX41-203ENST00000504781 C1QTNF8P60827 252 aa12.34□□□□□ -0.43
DDX41-203ENST00000504781 VGLL2Q8N8G2 317 aa12.34□□□□□ -0.43
DDX41-203ENST00000504781 CNBD1Q8NA66 436 aa12.34□□□□□ -0.43
DDX41-203ENST00000504781 ZNF512BQ96KM6 892 aaPredicted RBP12.34□□□□□ -0.43
DDX41-203ENST00000504781 SEC31BQ9NQW1 1179 aa12.34□□□□□ -0.43
DDX41-203ENST00000504781 PARP3Q9Y6F1 533 aa12.34□□□□□ -0.43
DDX41-203ENST00000504781 DDX60Q8IY21 1712 aaKnown RBP12.34□□□□□ -0.43
DDX41-203ENST00000504781 KLRG2A4D1S0 409 aaPredicted RBP12.33□□□□□ -0.44
DDX41-203ENST00000504781 REC8O95072 547 aa12.33□□□□□ -0.44
DDX41-203ENST00000504781 CHMLP26374 656 aa12.33□□□□□ -0.44
DDX41-203ENST00000504781 ANP32AP39687 249 aaKnown RBP12.33□□□□□ -0.44
DDX41-203ENST00000504781 ST5P78524 1137 aa12.33□□□□□ -0.44
DDX41-203ENST00000504781 DDX46Q7L014 1031 aaKnown RBP12.33□□□□□ -0.44
DDX41-203ENST00000504781 ZNF526Q8TF50 670 aaPredicted RBP12.33□□□□□ -0.44
DDX41-203ENST00000504781 RUFY2Q8WXA3 655 aa12.33□□□□□ -0.44
DDX41-203ENST00000504781 LPIN2Q92539 896 aa12.33□□□□□ -0.44
DDX41-203ENST00000504781 HAUS7Q99871 368 aa12.33□□□□□ -0.44
DDX41-203ENST00000504781 DBNDD2Q9BQY9 259 aa12.33□□□□□ -0.44
DDX41-203ENST00000504781 RIC1Q4ADV7 1423 aa12.33□□□□□ -0.44
DDX41-203ENST00000504781 C4AP0C0L4 1744 aa12.33□□□□□ -0.44
DDX41-203ENST00000504781 LAMB2P55268 1798 aa12.33□□□□□ -0.44
DDX41-203ENST00000504781 A0A0G2JLW4 131 aa12.32□□□□□ -0.44
DDX41-203ENST00000504781 POLRMTO00411 1230 aaKnown RBP12.32□□□□□ -0.44
DDX41-203ENST00000504781 FGFR2P21802 821 aa12.32□□□□□ -0.44
DDX41-203ENST00000504781 PUM3Q15397 648 aaKnown RBP12.32□□□□□ -0.44
DDX41-203ENST00000504781 ATP2B3Q16720 1220 aa12.32□□□□□ -0.44
DDX41-203ENST00000504781 GORABQ5T7V8 394 aa12.32□□□□□ -0.44
DDX41-203ENST00000504781 TSHZ3Q63HK5 1081 aa12.32□□□□□ -0.44
DDX41-203ENST00000504781 PRR5LQ6MZQ0 368 aa12.32□□□□□ -0.44
DDX41-203ENST00000504781 XAGE2Q96GT9 111 aa12.32□□□□□ -0.44
DDX41-203ENST00000504781 TBC1D32Q96NH3 1257 aa12.32□□□□□ -0.44
DDX41-203ENST00000504781 C22orf23Q9BZE7 217 aa12.32□□□□□ -0.44
DDX41-203ENST00000504781 ANKRD2Q9GZV1 360 aa12.32□□□□□ -0.44
DDX41-203ENST00000504781 BOLA2Q9H3K6 86 aa12.32□□□□□ -0.44
DDX41-203ENST00000504781 BBOX1O75936 387 aa12.31□□□□□ -0.44
DDX41-203ENST00000504781 IFIT1P09914 478 aaKnown RBP12.31□□□□□ -0.44
DDX41-203ENST00000504781 RBM25P49756 843 aaKnown RBP12.31□□□□□ -0.44
DDX41-203ENST00000504781 UBE4AQ14139 1066 aa12.31□□□□□ -0.44
DDX41-203ENST00000504781 IL27Q8NEV9 243 aa12.31□□□□□ -0.44
DDX41-203ENST00000504781 DDRGK1Q96HY6 314 aa12.31□□□□□ -0.44
DDX41-203ENST00000504781 BRIP1Q9BX63 1249 aa12.31□□□□□ -0.44
DDX41-203ENST00000504781 USP26Q9BXU7 913 aa12.31□□□□□ -0.44
DDX41-203ENST00000504781 TLR7Q9NYK1 1049 aaKnown RBP12.31□□□□□ -0.44
DDX41-203ENST00000504781 BCS1LQ9Y276 419 aa12.31□□□□□ -0.44
DDX41-203ENST00000504781 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
DDX41-203ENST00000504781 UQCRFS1P1P0C7P4 283 aa12.3□□□□□ -0.44
DDX41-203ENST00000504781 SLC5A1P13866 664 aa12.3□□□□□ -0.44
DDX41-203ENST00000504781 HOXA10P31260 410 aaPredicted RBP12.3□□□□□ -0.44
DDX41-203ENST00000504781 MFAP1P55081 439 aaKnown RBP12.3□□□□□ -0.44
DDX41-203ENST00000504781 TGFB2P61812 414 aa12.3□□□□□ -0.44
DDX41-203ENST00000504781 LRRFIP1Q32MZ4 808 aaKnown RBP12.3□□□□□ -0.44
DDX41-203ENST00000504781 CRY2Q49AN0 593 aa12.3□□□□□ -0.44
DDX41-203ENST00000504781 C3orf67Q6ZVT6 689 aa12.3□□□□□ -0.44
DDX41-203ENST00000504781 RBM17Q96I25 401 aaKnown RBP12.3□□□□□ -0.44
DDX41-203ENST00000504781 CRAMP1Q96RY5 1269 aa12.3□□□□□ -0.44
DDX41-203ENST00000504781 ESYT1Q9BSJ8 1104 aa12.3□□□□□ -0.44
DDX41-203ENST00000504781 GPBP1L1Q9HC44 474 aaPredicted RBP12.3□□□□□ -0.44
DDX41-203ENST00000504781 MINPP1Q9UNW1 487 aa12.3□□□□□ -0.44
DDX41-203ENST00000504781 ZBTB22O15209 634 aa12.29□□□□□ -0.44
DDX41-203ENST00000504781 DPEP1P16444 411 aa12.29□□□□□ -0.44
DDX41-203ENST00000504781 CHRNDQ07001 517 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms