RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 TUBB2BQ9BVA1 445 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.75□□□□□ -0.53
ITGA1-203ENST00000504669 DHX57Q6P158 1386 aaKnown RBP11.75□□□□□ -0.53
ITGA1-203ENST00000504669 ARHGEF9O43307 516 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 ARHGAP18Q8N392 663 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 BICD1Q96G01 975 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 COQ7Q99807 217 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 HELLSQ9NRZ9 838 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 ABCF2Q9UG63 623 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 SYT1P21579 422 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 ZNF165P49910 485 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 IKQ13123 557 aaPredicted RBP11.75□□□□□ -0.53
ITGA1-203ENST00000504669 C16orf87Q6PH81 154 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 IFT81Q8WYA0 676 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 GIMAP4Q9NUV9 329 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 MX1P20591 662 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 ATP5DP30049 168 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 PANK3Q9H999 370 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 CNNM3Q8NE01 707 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 FBXO18Q8NFZ0 1043 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 PLEKHA4Q9H4M7 779 aa11.75□□□□□ -0.53
ITGA1-203ENST00000504669 PDE6BP35913 854 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 CHMP4BP1P59074 171 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 CUL3Q13618 768 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 CCDC62Q6P9F0 684 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 SLC30A9Q6PML9 568 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 USP33Q8TEY7 942 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 SYTL4Q96C24 671 aaPredicted RBP11.74□□□□□ -0.53
ITGA1-203ENST00000504669 FLOT2Q14254 428 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 GNPTABQ3T906 1256 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 ZNF569Q5MCW4 686 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 CCDC102BQ68D86 513 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 RBSNQ9H1K0 784 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 SNUPNO95149 360 aaKnown RBP11.74□□□□□ -0.53
ITGA1-203ENST00000504669 PPFIA1Q13136 1202 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 LAMB3Q13751 1172 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 NME8Q8N427 588 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 SH3GL2Q99962 352 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 SPZ1Q9BXG8 430 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 EIF3CLB5ME19 914 aaKnown RBP11.74□□□□□ -0.53
ITGA1-203ENST00000504669 RASSF2P50749 326 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 TAOK1Q7L7X3 1001 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 FAM200AQ8TCP9 573 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 EIF3CQ99613 913 aaKnown RBP11.74□□□□□ -0.53
ITGA1-203ENST00000504669 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.74□□□□□ -0.53
ITGA1-203ENST00000504669 API5Q9BZZ5 524 aaKnown RBP11.74□□□□□ -0.53
ITGA1-203ENST00000504669 SCAND2PQ9GZW5 306 aaPredicted RBP11.74□□□□□ -0.53
ITGA1-203ENST00000504669 CHUKO15111 745 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 SH3BP5O60239 455 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 SCP2P22307 547 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 CCDC15Q0P6D6 951 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 CARD6Q9BX69 1037 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 MIS18AQ9NYP9 233 aa11.74□□□□□ -0.53
ITGA1-203ENST00000504669 SEMA3FQ13275 785 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 KARSQ15046 597 aaKnown RBP11.73□□□□□ -0.53
ITGA1-203ENST00000504669 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.73□□□□□ -0.53
ITGA1-203ENST00000504669 VSIG1Q86XK7 387 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 GPR161Q8N6U8 529 aaKnown RBP11.73□□□□□ -0.53
ITGA1-203ENST00000504669 SENP3Q9H4L4 574 aaPredicted RBP11.73□□□□□ -0.53
ITGA1-203ENST00000504669 EXOC1Q9NV70 894 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 TSPY2A6NKD2 308 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 TSPY3P0CV98 308 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 TSPY8P0CW00 308 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 TROVE2P10155 538 aaKnown RBP eCLIP11.73□□□□□ -0.53
ITGA1-203ENST00000504669 GUCY2CP25092 1073 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 TSPY1Q01534 308 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 ST13P4Q8IZP2 240 aaPredicted RBP11.73□□□□□ -0.53
ITGA1-203ENST00000504669 SH2D4AQ9H788 454 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 ACTR5Q9H9F9 607 aaPredicted RBP11.73□□□□□ -0.53
ITGA1-203ENST00000504669 CETN2P41208 172 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 BRD3Q15059 726 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 NAIF1Q69YI7 327 aaPredicted RBP11.73□□□□□ -0.53
ITGA1-203ENST00000504669 SPAG5Q96R06 1193 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 RASSF10A6NK89 507 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 ELF1P32519 619 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 TMED10P49755 219 aaKnown RBP11.73□□□□□ -0.53
ITGA1-203ENST00000504669 ENAHQ8N8S7 591 aaPredicted RBP11.73□□□□□ -0.53
ITGA1-203ENST00000504669 CCHCR1Q8TD31 782 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 TRIM11Q96F44 468 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 EID1Q9Y6B2 187 aa11.73□□□□□ -0.53
ITGA1-203ENST00000504669 ENO4A6NNW6 628 aa11.72□□□□□ -0.53
ITGA1-203ENST00000504669 KLHL23Q8NBE8 558 aa11.72□□□□□ -0.53
ITGA1-203ENST00000504669 SELENOOQ9BVL4 669 aa11.72□□□□□ -0.53
ITGA1-203ENST00000504669 DMPKQ09013 629 aa11.72□□□□□ -0.53
ITGA1-203ENST00000504669 EP400NLQ6ZTU2 488 aa11.72□□□□□ -0.53
ITGA1-203ENST00000504669 RPAP2Q8IXW5 612 aaPredicted RBP11.72□□□□□ -0.53
ITGA1-203ENST00000504669 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.72□□□□□ -0.53
ITGA1-203ENST00000504669 NEK2P51955 445 aa11.72□□□□□ -0.53
ITGA1-203ENST00000504669 UBASH3AP57075 661 aa11.72□□□□□ -0.53
ITGA1-203ENST00000504669 USP37Q86T82 979 aa11.72□□□□□ -0.53
ITGA1-203ENST00000504669 BCAS4Q8TDM0 211 aa11.72□□□□□ -0.53
ITGA1-203ENST00000504669 C17orf50Q8WW18 174 aa11.72□□□□□ -0.53
ITGA1-203ENST00000504669 EPSTI1Q96J88 318 aa11.72□□□□□ -0.53
ITGA1-203ENST00000504669 GNAT2P19087 354 aa11.72□□□□□ -0.53
ITGA1-203ENST00000504669 KIAA0753Q2KHM9 967 aa11.72□□□□□ -0.53
ITGA1-203ENST00000504669 CCDC77Q9BR77 488 aa11.72□□□□□ -0.53
ITGA1-203ENST00000504669 PPANQ9NQ55 473 aaKnown RBP11.72□□□□□ -0.53
ITGA1-203ENST00000504669 KCNA4P22459 653 aa11.72□□□□□ -0.53
ITGA1-203ENST00000504669 DDX41Q9UJV9 622 aaKnown RBP11.72□□□□□ -0.53
ITGA1-203ENST00000504669 EEF2P13639 858 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms