RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 RGL4Q8IZJ4 473 aa8.66□□□□□ -1.02
GGPS1-208ENST00000497327 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.66□□□□□ -1.02
GGPS1-208ENST00000497327 TLR7Q9NYK1 1049 aaKnown RBP8.66□□□□□ -1.02
GGPS1-208ENST00000497327 KIF21AQ7Z4S6 1674 aa8.65□□□□□ -1.02
GGPS1-208ENST00000497327 POLA1P09884 1462 aaPredicted RBP8.65□□□□□ -1.02
GGPS1-208ENST00000497327 ZMYM1Q5SVZ6 1142 aa8.65□□□□□ -1.02
GGPS1-208ENST00000497327 SSBP4Q9BWG4 385 aaPredicted RBP8.65□□□□□ -1.02
GGPS1-208ENST00000497327 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.64□□□□□ -1.03
GGPS1-208ENST00000497327 TNFRSF10BO14763 440 aa8.64□□□□□ -1.03
GGPS1-208ENST00000497327 XYLBO75191 536 aa8.64□□□□□ -1.03
GGPS1-208ENST00000497327 NRG1Q02297 640 aaPredicted RBP8.64□□□□□ -1.03
GGPS1-208ENST00000497327 ELMSAN1Q6PJG2 1045 aa8.64□□□□□ -1.03
GGPS1-208ENST00000497327 CAPN12Q6ZSI9 719 aa8.64□□□□□ -1.03
GGPS1-208ENST00000497327 HFE2Q6ZVN8 426 aa8.64□□□□□ -1.03
GGPS1-208ENST00000497327 FBXO11Q86XK2 927 aa8.64□□□□□ -1.03
GGPS1-208ENST00000497327 CMTR1Q8N1G2 835 aaKnown RBP8.64□□□□□ -1.03
GGPS1-208ENST00000497327 DTWD1Q8N5C7 304 aa8.64□□□□□ -1.03
GGPS1-208ENST00000497327 COL26A1Q96A83 441 aa8.64□□□□□ -1.03
GGPS1-208ENST00000497327 HOXD8P13378 290 aaPredicted RBP8.63□□□□□ -1.03
GGPS1-208ENST00000497327 TRIP4Q15650 581 aaPredicted RBP8.63□□□□□ -1.03
GGPS1-208ENST00000497327 SMG9Q9H0W8 520 aaKnown RBP8.63□□□□□ -1.03
GGPS1-208ENST00000497327 RAD54L2Q9Y4B4 1467 aa8.63□□□□□ -1.03
GGPS1-208ENST00000497327 KIF27Q86VH2 1401 aa8.63□□□□□ -1.03
GGPS1-208ENST00000497327 MMP20O60882 483 aa8.62□□□□□ -1.03
GGPS1-208ENST00000497327 DEAF1O75398 565 aaPredicted RBP8.62□□□□□ -1.03
GGPS1-208ENST00000497327 ATG7O95352 703 aa8.62□□□□□ -1.03
GGPS1-208ENST00000497327 H2AFB1P0C5Y9 115 aa8.62□□□□□ -1.03
GGPS1-208ENST00000497327 H2AFB2P0C5Z0 115 aa8.62□□□□□ -1.03
GGPS1-208ENST00000497327 C16orf46Q6P387 395 aa8.62□□□□□ -1.03
GGPS1-208ENST00000497327 CXXC1Q9P0U4 656 aaPredicted RBP8.62□□□□□ -1.03
GGPS1-208ENST00000497327 WDR62O43379 1518 aa8.62□□□□□ -1.03
GGPS1-208ENST00000497327 ABCA10Q8WWZ4 1543 aa8.62□□□□□ -1.03
GGPS1-208ENST00000497327 EIF2AK2P19525 551 aaKnown RBP8.61□□□□□ -1.03
GGPS1-208ENST00000497327 PRSS36Q5K4E3 855 aa8.61□□□□□ -1.03
GGPS1-208ENST00000497327 WFDC8Q8IUA0 241 aa8.61□□□□□ -1.03
GGPS1-208ENST00000497327 SLAIN2Q9P270 581 aa8.61□□□□□ -1.03
GGPS1-208ENST00000497327 ERCC6Q03468 1493 aa8.61□□□□□ -1.03
GGPS1-208ENST00000497327 CUX2O14529 1486 aa8.6□□□□□ -1.03
GGPS1-208ENST00000497327 J3QW42 95 aa8.6□□□□□ -1.03
GGPS1-208ENST00000497327 SOX18P35713 384 aa8.6□□□□□ -1.03
GGPS1-208ENST00000497327 TMEM164Q5U3C3 297 aa8.6□□□□□ -1.03
GGPS1-208ENST00000497327 MKNK1Q9BUB5 465 aa8.6□□□□□ -1.03
GGPS1-208ENST00000497327 USP21Q9UK80 565 aa8.6□□□□□ -1.03
GGPS1-208ENST00000497327 LOC102724428A0A0B4J2F2 783 aa8.59□□□□□ -1.03
GGPS1-208ENST00000497327 PSAPP07602 524 aa8.59□□□□□ -1.03
GGPS1-208ENST00000497327 BRD2P25440 801 aaKnown RBP8.59□□□□□ -1.03
GGPS1-208ENST00000497327 ARID4AP29374 1257 aaPredicted RBP8.59□□□□□ -1.03
GGPS1-208ENST00000497327 SIK1P57059 783 aa8.59□□□□□ -1.03
GGPS1-208ENST00000497327 PLD4Q96BZ4 506 aa8.59□□□□□ -1.03
GGPS1-208ENST00000497327 PRXQ9BXM0 1461 aa8.58□□□□□ -1.04
GGPS1-208ENST00000497327 THOC2Q8NI27 1593 aaKnown RBP8.58□□□□□ -1.04
GGPS1-208ENST00000497327 DLL1O00548 723 aa8.58□□□□□ -1.04
GGPS1-208ENST00000497327 NOS3P29474 1203 aa8.58□□□□□ -1.04
GGPS1-208ENST00000497327 WFDC12Q8WWY7 111 aa8.58□□□□□ -1.04
GGPS1-208ENST00000497327 CLP1Q92989 425 aaKnown RBP8.58□□□□□ -1.04
GGPS1-208ENST00000497327 TP53INP1Q96A56 240 aa8.58□□□□□ -1.04
GGPS1-208ENST00000497327 NSUN5Q96P11 429 aaKnown RBP8.58□□□□□ -1.04
GGPS1-208ENST00000497327 NLRP13Q86W25 1043 aa8.57□□□□□ -1.04
GGPS1-208ENST00000497327 TARBP1Q13395 1621 aaKnown RBP8.57□□□□□ -1.04
GGPS1-208ENST00000497327 IREB2P48200 963 aaKnown RBP8.56□□□□□ -1.04
GGPS1-208ENST00000497327 NAA30Q147X3 362 aaPredicted RBP8.56□□□□□ -1.04
GGPS1-208ENST00000497327 IGF2-ASQ6U949 168 aa8.56□□□□□ -1.04
GGPS1-208ENST00000497327 IFT140Q96RY7 1462 aa8.56□□□□□ -1.04
GGPS1-208ENST00000497327 KIF21BO75037 1637 aa8.55□□□□□ -1.04
GGPS1-208ENST00000497327 PTCD1O75127 700 aaKnown RBP8.55□□□□□ -1.04
GGPS1-208ENST00000497327 COL13A1Q5TAT6 717 aaPredicted RBP8.55□□□□□ -1.04
GGPS1-208ENST00000497327 MEGF10Q96KG7 1140 aa8.55□□□□□ -1.04
GGPS1-208ENST00000497327 TDRD9Q8NDG6 1382 aaKnown RBP8.55□□□□□ -1.04
GGPS1-208ENST00000497327 TNIKQ9UKE5 1360 aa8.55□□□□□ -1.04
GGPS1-208ENST00000497327 GOLGA3Q08378 1498 aa8.55□□□□□ -1.04
GGPS1-208ENST00000497327 ZBTB39O15060 712 aa8.54□□□□□ -1.04
GGPS1-208ENST00000497327 GHRHP01286 108 aa8.54□□□□□ -1.04
GGPS1-208ENST00000497327 ZAP70P43403 619 aa8.54□□□□□ -1.04
GGPS1-208ENST00000497327 OR13H1Q8NG92 308 aa8.54□□□□□ -1.04
GGPS1-208ENST00000497327 PBXIP1Q96AQ6 731 aa8.54□□□□□ -1.04
GGPS1-208ENST00000497327 ZMYND15Q9H091 742 aa8.54□□□□□ -1.04
GGPS1-208ENST00000497327 TRIM33Q9UPN9 1127 aa8.54□□□□□ -1.04
GGPS1-208ENST00000497327 WDR97A6NE52 1622 aa8.54□□□□□ -1.04
GGPS1-208ENST00000497327 RAPGEF2Q9Y4G8 1499 aa8.53□□□□□ -1.04
GGPS1-208ENST00000497327 UBAP1LF5GYI3 381 aa8.53□□□□□ -1.04
GGPS1-208ENST00000497327 ARTNQ5T4W7 220 aa8.53□□□□□ -1.04
GGPS1-208ENST00000497327 GDF6Q6KF10 455 aaPredicted RBP8.53□□□□□ -1.04
GGPS1-208ENST00000497327 IL22RA1Q8N6P7 574 aa8.53□□□□□ -1.04
GGPS1-208ENST00000497327 PIK3R5Q8WYR1 880 aa8.53□□□□□ -1.04
GGPS1-208ENST00000497327 KRTAP4-8Q9BYQ9 185 aa8.53□□□□□ -1.04
GGPS1-208ENST00000497327 STIM2Q9P246 746 aa8.53□□□□□ -1.04
GGPS1-208ENST00000497327 GAPVD1Q14C86 1478 aa8.52□□□□□ -1.05
GGPS1-208ENST00000497327 CARMIL1Q5VZK9 1371 aa8.52□□□□□ -1.05
GGPS1-208ENST00000497327 ABCA5Q8WWZ7 1642 aa8.52□□□□□ -1.05
GGPS1-208ENST00000497327 SCO2A0A1W2PP80 73 aa8.52□□□□□ -1.05
GGPS1-208ENST00000497327 SETDB1Q15047 1291 aa8.52□□□□□ -1.05
GGPS1-208ENST00000497327 ERICH3Q5RHP9 1530 aa8.52□□□□□ -1.05
GGPS1-208ENST00000497327 FAM13BQ9NYF5 915 aa8.51□□□□□ -1.05
GGPS1-208ENST00000497327 AQRO60306 1485 aaKnown RBP eCLIP8.51□□□□□ -1.05
GGPS1-208ENST00000497327 ZNF608Q9ULD9 1512 aaPredicted RBP8.5□□□□□ -1.05
GGPS1-208ENST00000497327 ATP11AP98196 1134 aa8.5□□□□□ -1.05
GGPS1-208ENST00000497327 ADAMTSL4Q6UY14 1074 aa8.5□□□□□ -1.05
GGPS1-208ENST00000497327 DZIP1LQ8IYY4 767 aaKnown RBP8.5□□□□□ -1.05
GGPS1-208ENST00000497327 GPR152Q8TDT2 470 aa8.5□□□□□ -1.05
GGPS1-208ENST00000497327 RBSNQ9H1K0 784 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms