RNA–Protein interactions for RNA: ENST00000495462.5

RPN1-206, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-206ENST00000495462 DMRTA1Q5VZB9 504 aa8.5□□□□□ -1.05
RPN1-206ENST00000495462 SYNE4Q8N205 404 aa8.5□□□□□ -1.05
RPN1-206ENST00000495462 KCNK17Q96T54 332 aa8.5□□□□□ -1.05
RPN1-206ENST00000495462 ADAM33Q9BZ11 813 aa8.5□□□□□ -1.05
RPN1-206ENST00000495462 LTBP1Q14766 1721 aa8.49□□□□□ -1.05
RPN1-206ENST00000495462 NEFMP07197 916 aa8.49□□□□□ -1.05
RPN1-206ENST00000495462 PTPREP23469 700 aa8.49□□□□□ -1.05
RPN1-206ENST00000495462 GTF2E1P29083 439 aaPredicted RBP8.49□□□□□ -1.05
RPN1-206ENST00000495462 RALBP1Q15311 655 aa8.49□□□□□ -1.05
RPN1-206ENST00000495462 COL13A1Q5TAT6 717 aaPredicted RBP8.49□□□□□ -1.05
RPN1-206ENST00000495462 TYW1BQ6NUM6 668 aa8.49□□□□□ -1.05
RPN1-206ENST00000495462 ADGRD1Q6QNK2 874 aa8.49□□□□□ -1.05
RPN1-206ENST00000495462 GIGYF2Q6Y7W6 1299 aaKnown RBP8.49□□□□□ -1.05
RPN1-206ENST00000495462 KIF6Q6ZMV9 814 aa8.49□□□□□ -1.05
RPN1-206ENST00000495462 FBXW7Q969H0 707 aa8.49□□□□□ -1.05
RPN1-206ENST00000495462 EPAS1Q99814 870 aa8.49□□□□□ -1.05
RPN1-206ENST00000495462 TAF1DQ9H5J8 278 aaPredicted RBP8.49□□□□□ -1.05
RPN1-206ENST00000495462 COL4A1P02462 1669 aa8.49□□□□□ -1.05
RPN1-206ENST00000495462 FZD9O00144 591 aa8.48□□□□□ -1.05
RPN1-206ENST00000495462 HOXA10P31260 410 aaPredicted RBP8.48□□□□□ -1.05
RPN1-206ENST00000495462 IARSP41252 1262 aaKnown RBP8.48□□□□□ -1.05
RPN1-206ENST00000495462 AIMP1Q12904 312 aaKnown RBP8.48□□□□□ -1.05
RPN1-206ENST00000495462 SOGA3Q5TF21 947 aa8.48□□□□□ -1.05
RPN1-206ENST00000495462 XAGE3Q8WTP9 111 aa8.48□□□□□ -1.05
RPN1-206ENST00000495462 ADAMTS8Q9UP79 889 aa8.48□□□□□ -1.05
RPN1-206ENST00000495462 RNF123Q5XPI4 1314 aa8.48□□□□□ -1.05
RPN1-206ENST00000495462 MYBBP1AQ9BQG0 1328 aaKnown RBP8.48□□□□□ -1.05
RPN1-206ENST00000495462 ADAMTSL1Q8N6G6 1762 aa8.48□□□□□ -1.05
RPN1-206ENST00000495462 RIC1Q4ADV7 1423 aa8.47□□□□□ -1.05
RPN1-206ENST00000495462 CHL1O00533 1208 aa8.47□□□□□ -1.05
RPN1-206ENST00000495462 ITGBL1O95965 494 aaPredicted RBP8.47□□□□□ -1.05
RPN1-206ENST00000495462 ALDH1B1P30837 517 aa8.47□□□□□ -1.05
RPN1-206ENST00000495462 FMR1Q06787 632 aaKnown RBP eCLIP8.47□□□□□ -1.051e-9■■□□□ 11.8
RPN1-206ENST00000495462 COPS6Q7L5N1 327 aa8.47□□□□□ -1.05
RPN1-206ENST00000495462 RTKN2Q8IZC4 609 aa8.47□□□□□ -1.05
RPN1-206ENST00000495462 KCNV2Q8TDN2 545 aa8.47□□□□□ -1.05
RPN1-206ENST00000495462 SLC4A5Q9BY07 1137 aa8.47□□□□□ -1.05
RPN1-206ENST00000495462 NYXQ9GZU5 481 aa8.47□□□□□ -1.05
RPN1-206ENST00000495462 PNNQ9H307 717 aaKnown RBP8.47□□□□□ -1.05
RPN1-206ENST00000495462 LAS1LQ9Y4W2 734 aaKnown RBP8.47□□□□□ -1.05
RPN1-206ENST00000495462 LAMB2P55268 1798 aa8.47□□□□□ -1.05
RPN1-206ENST00000495462 ERBB4Q15303 1308 aa8.47□□□□□ -1.05
RPN1-206ENST00000495462 PASKQ96RG2 1323 aa8.47□□□□□ -1.05
RPN1-206ENST00000495462 IBTKQ9P2D0 1353 aaPredicted RBP8.47□□□□□ -1.05
RPN1-206ENST00000495462 SCN4AP35499 1836 aa8.46□□□□□ -1.06
RPN1-206ENST00000495462 HCLS1P14317 486 aaPredicted RBP8.46□□□□□ -1.06
RPN1-206ENST00000495462 SLC10A5Q5PT55 438 aa8.46□□□□□ -1.06
RPN1-206ENST00000495462 NLRP10Q86W26 655 aa8.46□□□□□ -1.06
RPN1-206ENST00000495462 DDX12PQ92771 950 aa8.46□□□□□ -1.06
RPN1-206ENST00000495462 RPGRQ92834 1020 aaKnown RBP8.46□□□□□ -1.06
RPN1-206ENST00000495462 CHPF2Q9P2E5 772 aa8.46□□□□□ -1.06
RPN1-206ENST00000495462 MKRN1Q9UHC7 482 aaKnown RBP8.46□□□□□ -1.06
RPN1-206ENST00000495462 TAF1P21675 1872 aa8.46□□□□□ -1.06
RPN1-206ENST00000495462 ABCC4O15439 1325 aa8.46□□□□□ -1.06
RPN1-206ENST00000495462 ANKRD36CQ5JPF3 1778 aa8.45□□□□□ -1.06
RPN1-206ENST00000495462 PPEF1O14829 653 aaPredicted RBP8.45□□□□□ -1.06
RPN1-206ENST00000495462 HRO43593 1189 aa8.45□□□□□ -1.06
RPN1-206ENST00000495462 HSPA1AP0DMV8 641 aaKnown RBP8.45□□□□□ -1.06
RPN1-206ENST00000495462 HSPA1BP0DMV9 641 aaKnown RBP8.45□□□□□ -1.06
RPN1-206ENST00000495462 EPHX2P34913 555 aa8.45□□□□□ -1.06
RPN1-206ENST00000495462 SCNN1DP51172 638 aa8.45□□□□□ -1.06
RPN1-206ENST00000495462 CCDC184Q52MB2 194 aa8.45□□□□□ -1.06
RPN1-206ENST00000495462 EAPPQ56P03 285 aaPredicted RBP8.45□□□□□ -1.06
RPN1-206ENST00000495462 MAP1SQ66K74 1059 aaPredicted RBP8.45□□□□□ -1.06
RPN1-206ENST00000495462 RUNDC1Q96C34 613 aa8.45□□□□□ -1.06
RPN1-206ENST00000495462 RBM17Q96I25 401 aaKnown RBP8.45□□□□□ -1.06
RPN1-206ENST00000495462 CRAMP1Q96RY5 1269 aa8.45□□□□□ -1.06
RPN1-206ENST00000495462 PSMD1Q99460 953 aa8.45□□□□□ -1.06
RPN1-206ENST00000495462 UTP14AQ9BVJ6 771 aaKnown RBP8.45□□□□□ -1.06
RPN1-206ENST00000495462 BABAM1Q9NWV8 329 aa8.45□□□□□ -1.06
RPN1-206ENST00000495462 PPP1R3GB7ZBB8 358 aa8.44□□□□□ -1.06
RPN1-206ENST00000495462 EPS15P42566 896 aa8.44□□□□□ -1.06
RPN1-206ENST00000495462 TCIRG1Q13488 830 aa8.44□□□□□ -1.06
RPN1-206ENST00000495462 AOC3Q16853 763 aa8.44□□□□□ -1.06
RPN1-206ENST00000495462 PARP10Q53GL7 1025 aa8.44□□□□□ -1.06
RPN1-206ENST00000495462 PPP1R42Q7Z4L9 355 aa8.44□□□□□ -1.06
RPN1-206ENST00000495462 LDHDQ86WU2 507 aa8.44□□□□□ -1.06
RPN1-206ENST00000495462 RNF166Q96A37 237 aaPredicted RBP8.44□□□□□ -1.06
RPN1-206ENST00000495462 NLRP3Q96P20 1036 aa8.44□□□□□ -1.06
RPN1-206ENST00000495462 ZBED2Q9BTP6 218 aa8.44□□□□□ -1.06
RPN1-206ENST00000495462 PRKRIP1Q9H875 184 aaPredicted RBP8.44□□□□□ -1.06
RPN1-206ENST00000495462 DDX21Q9NR30 783 aaKnown RBP eCLIP8.44□□□□□ -1.06
RPN1-206ENST00000495462 HACL1Q9UJ83 578 aa8.44□□□□□ -1.06
RPN1-206ENST00000495462 ATP6V0A2Q9Y487 856 aa8.44□□□□□ -1.06
RPN1-206ENST00000495462 GJA3Q9Y6H8 435 aa8.44□□□□□ -1.06
RPN1-206ENST00000495462 DUOX1Q9NRD9 1551 aa8.44□□□□□ -1.06
RPN1-206ENST00000495462 DDX60Q8IY21 1712 aaKnown RBP8.43□□□□□ -1.06
RPN1-206ENST00000495462 IQCA1LA6NCM1 817 aa8.43□□□□□ -1.06
RPN1-206ENST00000495462 ATP5J2-PTCD1G3V325 749 aa8.43□□□□□ -1.06
RPN1-206ENST00000495462 LMOD3Q0VAK6 560 aa8.43□□□□□ -1.06
RPN1-206ENST00000495462 NBR1Q14596 966 aa8.43□□□□□ -1.06
RPN1-206ENST00000495462 WDR43Q15061 677 aaKnown RBP eCLIP8.43□□□□□ -1.06
RPN1-206ENST00000495462 RTL5Q5HYW3 569 aaPredicted RBP8.43□□□□□ -1.06
RPN1-206ENST00000495462 GPC2Q8N158 579 aa8.43□□□□□ -1.06
RPN1-206ENST00000495462 MBIPQ9NS73 344 aa8.43□□□□□ -1.06
RPN1-206ENST00000495462 VPS9D1Q9Y2B5 631 aa8.43□□□□□ -1.06
RPN1-206ENST00000495462 SHTN1A0MZ66 631 aa8.42□□□□□ -1.06
RPN1-206ENST00000495462 ELL2O00472 640 aaPredicted RBP8.42□□□□□ -1.06
RPN1-206ENST00000495462 APAF1O14727 1248 aa8.42□□□□□ -1.06
RPN1-206ENST00000495462 PPIP5K2O43314 1243 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms