RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 ERC2O15083 957 aa13.51□□□□□ -0.25
PKP4-215ENST00000494945 GSPT1P15170 499 aaKnown RBP13.51□□□□□ -0.25
PKP4-215ENST00000494945 SEC31BQ9NQW1 1179 aa13.51□□□□□ -0.25
PKP4-215ENST00000494945 ECHDC1Q9NTX5 307 aa13.51□□□□□ -0.25
PKP4-215ENST00000494945 PARP3Q9Y6F1 533 aa13.51□□□□□ -0.25
PKP4-215ENST00000494945 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.51□□□□□ -0.25
PKP4-215ENST00000494945 CCDC88AQ3V6T2 1871 aa13.5□□□□□ -0.25
PKP4-215ENST00000494945 GLRX3O76003 335 aaKnown RBP13.5□□□□□ -0.25
PKP4-215ENST00000494945 MMP10P09238 476 aa13.5□□□□□ -0.25
PKP4-215ENST00000494945 METTL24Q5JXM2 366 aa13.5□□□□□ -0.25
PKP4-215ENST00000494945 DDX46Q7L014 1031 aaKnown RBP13.5□□□□□ -0.25
PKP4-215ENST00000494945 ANKRD18AQ8IVF6 992 aa13.5□□□□□ -0.25
PKP4-215ENST00000494945 PI4K2BQ8TCG2 481 aa13.5□□□□□ -0.25
PKP4-215ENST00000494945 SLC16A10Q8TF71 515 aa13.5□□□□□ -0.25
PKP4-215ENST00000494945 CCDC8Q9H0W5 538 aaPredicted RBP13.5□□□□□ -0.25
PKP4-215ENST00000494945 LTBP1Q14766 1721 aa13.5□□□□□ -0.25
PKP4-215ENST00000494945 CRY2Q49AN0 593 aa13.49□□□□□ -0.25
PKP4-215ENST00000494945 CCDC24Q8N4L8 307 aa13.49□□□□□ -0.25
PKP4-215ENST00000494945 VGLL2Q8N8G2 317 aa13.49□□□□□ -0.25
PKP4-215ENST00000494945 UPF1Q92900 1129 aaKnown RBP eCLIP13.49□□□□□ -0.25
PKP4-215ENST00000494945 BRIP1Q9BX63 1249 aa13.49□□□□□ -0.25
PKP4-215ENST00000494945 TSHZ2Q9NRE2 1034 aa13.49□□□□□ -0.25
PKP4-215ENST00000494945 DBNLQ9UJU6 430 aaKnown RBP13.49□□□□□ -0.25
PKP4-215ENST00000494945 BRCA1P38398 1863 aaKnown RBP13.48□□□□□ -0.25
PKP4-215ENST00000494945 A0A1B0GUL7 405 aa13.48□□□□□ -0.25
PKP4-215ENST00000494945 KLRG2A4D1S0 409 aaPredicted RBP13.48□□□□□ -0.25
PKP4-215ENST00000494945 PDE8BO95263 885 aa13.48□□□□□ -0.25
PKP4-215ENST00000494945 TSHZ3Q63HK5 1081 aa13.48□□□□□ -0.25
PKP4-215ENST00000494945 BSDC1Q9NW68 430 aaPredicted RBP13.48□□□□□ -0.25
PKP4-215ENST00000494945 CDC45O75419 566 aa13.47□□□□□ -0.25
PKP4-215ENST00000494945 SDSP20132 328 aa13.47□□□□□ -0.25
PKP4-215ENST00000494945 HOXA10P31260 410 aaPredicted RBP13.47□□□□□ -0.25
PKP4-215ENST00000494945 RPS8P62241 208 aaKnown RBP13.47□□□□□ -0.25
PKP4-215ENST00000494945 PUM3Q15397 648 aaKnown RBP13.47□□□□□ -0.25
PKP4-215ENST00000494945 ATP2B3Q16720 1220 aa13.47□□□□□ -0.25
PKP4-215ENST00000494945 MSL1Q68DK7 614 aa13.47□□□□□ -0.25
PKP4-215ENST00000494945 RPGRQ92834 1020 aaKnown RBP13.47□□□□□ -0.25
PKP4-215ENST00000494945 RBM17Q96I25 401 aaKnown RBP13.47□□□□□ -0.25
PKP4-215ENST00000494945 NEUROD6Q96NK8 337 aa13.47□□□□□ -0.25
PKP4-215ENST00000494945 DBNDD2Q9BQY9 259 aa13.47□□□□□ -0.25
PKP4-215ENST00000494945 TLR7Q9NYK1 1049 aaKnown RBP13.47□□□□□ -0.25
PKP4-215ENST00000494945 KIAA1551Q9HCM1 1747 aa13.47□□□□□ -0.25
PKP4-215ENST00000494945 SLX4Q8IY92 1834 aa13.46□□□□□ -0.25
PKP4-215ENST00000494945 EIF5BO60841 1220 aaKnown RBP13.46□□□□□ -0.25
PKP4-215ENST00000494945 ATP5JP18859 108 aa13.46□□□□□ -0.25
PKP4-215ENST00000494945 PDE6BP35913 854 aa13.46□□□□□ -0.25
PKP4-215ENST00000494945 TIMM10P62072 90 aa13.46□□□□□ -0.25
PKP4-215ENST00000494945 GRAPQ13588 217 aa13.46□□□□□ -0.25
PKP4-215ENST00000494945 GRAPLQ8TC17 118 aaPredicted RBP13.46□□□□□ -0.25
PKP4-215ENST00000494945 CELF1Q92879 486 aaKnown RBP13.46□□□□□ -0.25
PKP4-215ENST00000494945 TRIM6-TRIM34B2RNG4 842 aa13.45□□□□□ -0.26
PKP4-215ENST00000494945 FGFR2P21802 821 aa13.45□□□□□ -0.26
PKP4-215ENST00000494945 CHRNDQ07001 517 aa13.45□□□□□ -0.26
PKP4-215ENST00000494945 CNTROBQ8N137 903 aa13.45□□□□□ -0.26
PKP4-215ENST00000494945 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.45□□□□□ -0.26
PKP4-215ENST00000494945 LPIN2Q92539 896 aa13.45□□□□□ -0.26
PKP4-215ENST00000494945 XAGE2Q96GT9 111 aa13.45□□□□□ -0.26
PKP4-215ENST00000494945 CRAMP1Q96RY5 1269 aa13.45□□□□□ -0.26
PKP4-215ENST00000494945 ANKRD2Q9GZV1 360 aa13.45□□□□□ -0.26
PKP4-215ENST00000494945 CHD4Q14839 1912 aa13.45□□□□□ -0.26
PKP4-215ENST00000494945 SLC5A1P13866 664 aa13.44□□□□□ -0.26
PKP4-215ENST00000494945 CCDC158Q5M9N0 1113 aa13.44□□□□□ -0.26
PKP4-215ENST00000494945 GORABQ5T7V8 394 aa13.44□□□□□ -0.26
PKP4-215ENST00000494945 CASC1Q6TDU7 716 aa13.44□□□□□ -0.26
PKP4-215ENST00000494945 TMC4Q7Z404 712 aa13.44□□□□□ -0.26
PKP4-215ENST00000494945 MINPP1Q9UNW1 487 aa13.44□□□□□ -0.26
PKP4-215ENST00000494945 BBOX1O75936 387 aa13.43□□□□□ -0.26
PKP4-215ENST00000494945 UBE4AQ14139 1066 aa13.43□□□□□ -0.26
PKP4-215ENST00000494945 TBC1D9Q6ZT07 1266 aa13.43□□□□□ -0.26
PKP4-215ENST00000494945 C10orf71Q711Q0 1435 aa13.43□□□□□ -0.26
PKP4-215ENST00000494945 HELBQ8NG08 1087 aaPredicted RBP13.43□□□□□ -0.26
PKP4-215ENST00000494945 RILPL2Q969X0 211 aa13.43□□□□□ -0.26
PKP4-215ENST00000494945 EVI5LQ96CN4 794 aa13.43□□□□□ -0.26
PKP4-215ENST00000494945 PDGFDQ9GZP0 370 aaPredicted RBP13.43□□□□□ -0.26
PKP4-215ENST00000494945 MAST2Q6P0Q8 1798 aa13.43□□□□□ -0.26
PKP4-215ENST00000494945 TAF5LO75529 589 aa13.42□□□□□ -0.26
PKP4-215ENST00000494945 IFIT1P09914 478 aaKnown RBP13.42□□□□□ -0.26
PKP4-215ENST00000494945 SRGNP10124 158 aa13.42□□□□□ -0.26
PKP4-215ENST00000494945 NPR1P16066 1061 aa13.42□□□□□ -0.26
PKP4-215ENST00000494945 ADORA1P30542 326 aa13.42□□□□□ -0.26
PKP4-215ENST00000494945 TTC39AQ5SRH9 613 aa13.42□□□□□ -0.26
PKP4-215ENST00000494945 ZNF512BQ96KM6 892 aaPredicted RBP13.42□□□□□ -0.26
PKP4-215ENST00000494945 HAUS7Q99871 368 aa13.42□□□□□ -0.26
PKP4-215ENST00000494945 BOLA2Q9H3K6 86 aa13.42□□□□□ -0.26
PKP4-215ENST00000494945 RFX7Q2KHR2 1363 aa13.42□□□□□ -0.26
PKP4-215ENST00000494945 UQCRFS1P1P0C7P4 283 aa13.41□□□□□ -0.26
PKP4-215ENST00000494945 ALDH1B1P30837 517 aa13.41□□□□□ -0.26
PKP4-215ENST00000494945 TICAM2Q86XR7 235 aa13.41□□□□□ -0.26
PKP4-215ENST00000494945 MASTLQ96GX5 879 aa13.41□□□□□ -0.26
PKP4-215ENST00000494945 PSME4Q14997 1843 aa13.41□□□□□ -0.26
PKP4-215ENST00000494945 MAP4K4O95819 1239 aaPredicted RBP13.4□□□□□ -0.26
PKP4-215ENST00000494945 STYK1Q6J9G0 422 aa13.4□□□□□ -0.26
PKP4-215ENST00000494945 MTFR1LQ9H019 292 aa13.4□□□□□ -0.26
PKP4-215ENST00000494945 UPF2Q9HAU5 1272 aaKnown RBP13.4□□□□□ -0.26
PKP4-215ENST00000494945 ARFGEF1Q9Y6D6 1849 aa13.4□□□□□ -0.26
PKP4-215ENST00000494945 XDHP47989 1333 aa13.39□□□□□ -0.27
PKP4-215ENST00000494945 H0YIN7 160 aa13.39□□□□□ -0.27
PKP4-215ENST00000494945 HIP1O00291 1037 aa13.39□□□□□ -0.27
PKP4-215ENST00000494945 SEC24BO95487 1268 aa13.39□□□□□ -0.27
PKP4-215ENST00000494945 CHMLP26374 656 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms