RNA–Protein interactions for RNA: ENST00000494872.5

TRIM2-209, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 2,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-209ENST00000494872 MYD88Q99836 296 aa13.99□□□□□ -0.17
TRIM2-209ENST00000494872 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.99□□□□□ -0.17
TRIM2-209ENST00000494872 COL9A3Q14050 684 aaPredicted RBP13.99□□□□□ -0.17
TRIM2-209ENST00000494872 IFNL2Q8IZJ0 200 aa13.99□□□□□ -0.17
TRIM2-209ENST00000494872 MRFAP1L1Q96HT8 127 aa13.99□□□□□ -0.17
TRIM2-209ENST00000494872 C16orf45Q96MC5 204 aaPredicted RBP13.99□□□□□ -0.17
TRIM2-209ENST00000494872 NEK1Q96PY6 1258 aa13.99□□□□□ -0.17
TRIM2-209ENST00000494872 LLPHQ9BRT6 129 aaKnown RBP13.99□□□□□ -0.17
TRIM2-209ENST00000494872 DNAJC25Q9H1X3 360 aa13.99□□□□□ -0.17
TRIM2-209ENST00000494872 TLR7Q9NYK1 1049 aaKnown RBP13.99□□□□□ -0.17
TRIM2-209ENST00000494872 NRBP1Q9UHY1 535 aa13.99□□□□□ -0.17
TRIM2-209ENST00000494872 RGPD5Q99666 1765 aa13.98□□□□□ -0.17
TRIM2-209ENST00000494872 STK3Q13188 491 aa13.98□□□□□ -0.17
TRIM2-209ENST00000494872 ZNF589Q86UQ0 364 aaPredicted RBP13.98□□□□□ -0.17
TRIM2-209ENST00000494872 SIL1Q9H173 461 aa13.98□□□□□ -0.17
TRIM2-209ENST00000494872 OGFRQ9NZT2 677 aa13.98□□□□□ -0.17
TRIM2-209ENST00000494872 CGNQ9P2M7 1197 aaKnown RBP13.98□□□□□ -0.17
TRIM2-209ENST00000494872 GOLGA6L19H0YKK7 550 aa13.98□□□□□ -0.17
TRIM2-209ENST00000494872 H3BQV1 296 aa13.98□□□□□ -0.17
TRIM2-209ENST00000494872 IFFO2Q5TF58 517 aa13.98□□□□□ -0.17
TRIM2-209ENST00000494872 ANKRD13DQ6ZTN6 518 aa13.98□□□□□ -0.17
TRIM2-209ENST00000494872 CCDC112Q8NEF3 446 aa13.98□□□□□ -0.17
TRIM2-209ENST00000494872 CACTINQ8WUQ7 758 aaKnown RBP13.98□□□□□ -0.17
TRIM2-209ENST00000494872 BRF1Q92994 677 aa13.98□□□□□ -0.17
TRIM2-209ENST00000494872 TAF6LQ9Y6J9 622 aa13.98□□□□□ -0.17
TRIM2-209ENST00000494872 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
TRIM2-209ENST00000494872 C5P01031 1676 aa13.98□□□□□ -0.17
TRIM2-209ENST00000494872 ALS2Q96Q42 1657 aa13.98□□□□□ -0.17
TRIM2-209ENST00000494872 PLEKHG2Q9H7P9 1386 aa13.97□□□□□ -0.17
TRIM2-209ENST00000494872 SCN11AQ9UI33 1791 aa13.97□□□□□ -0.17
TRIM2-209ENST00000494872 SNRPA1P09661 255 aaKnown RBP13.97□□□□□ -0.17
TRIM2-209ENST00000494872 ATP5JP18859 108 aa13.97□□□□□ -0.17
TRIM2-209ENST00000494872 U2AF2P26368 475 aaKnown RBP eCLIP13.97□□□□□ -0.17
TRIM2-209ENST00000494872 RBM6P78332 1123 aaKnown RBP13.97□□□□□ -0.17
TRIM2-209ENST00000494872 IQCB1Q15051 598 aa13.97□□□□□ -0.17
TRIM2-209ENST00000494872 TPD52L1Q16890 204 aaPredicted RBP13.97□□□□□ -0.17
TRIM2-209ENST00000494872 ATL3Q6DD88 541 aa13.97□□□□□ -0.17
TRIM2-209ENST00000494872 ZNF496Q96IT1 587 aaPredicted RBP13.97□□□□□ -0.17
TRIM2-209ENST00000494872 COPRSQ9NQ92 184 aa13.97□□□□□ -0.17
TRIM2-209ENST00000494872 ABCC6O95255 1503 aa13.97□□□□□ -0.17
TRIM2-209ENST00000494872 STX1AQ16623 288 aa13.96□□□□□ -0.17
TRIM2-209ENST00000494872 EPHA10Q5JZY3 1008 aa13.96□□□□□ -0.17
TRIM2-209ENST00000494872 NAA16Q6N069 864 aaPredicted RBP13.96□□□□□ -0.17
TRIM2-209ENST00000494872 TTC5Q8N0Z6 440 aa13.96□□□□□ -0.17
TRIM2-209ENST00000494872 SMARCC2Q8TAQ2 1214 aa13.96□□□□□ -0.17
TRIM2-209ENST00000494872 JAK2O60674 1132 aa13.96□□□□□ -0.17
TRIM2-209ENST00000494872 LRP10Q7Z4F1 713 aa13.96□□□□□ -0.17
TRIM2-209ENST00000494872 LRRC8AQ8IWT6 810 aa13.96□□□□□ -0.17
TRIM2-209ENST00000494872 KLHDC4Q8TBB5 520 aa13.96□□□□□ -0.17
TRIM2-209ENST00000494872 DCAF5Q96JK2 942 aa13.96□□□□□ -0.17
TRIM2-209ENST00000494872 RCOR1Q9UKL0 485 aa13.96□□□□□ -0.17
TRIM2-209ENST00000494872 COL15A1P39059 1388 aa13.95□□□□□ -0.18
TRIM2-209ENST00000494872 SPDYE4A6NLX3 237 aa13.95□□□□□ -0.18
TRIM2-209ENST00000494872 HMGB1P09429 215 aaKnown RBP13.95□□□□□ -0.18
TRIM2-209ENST00000494872 Q6ZUG5 572 aa13.95□□□□□ -0.18
TRIM2-209ENST00000494872 CTNNA3Q9UI47 895 aa13.95□□□□□ -0.18
TRIM2-209ENST00000494872 ZHX1Q9UKY1 873 aaPredicted RBP13.95□□□□□ -0.18
TRIM2-209ENST00000494872 CSB-PGBD3P0DP91 1061 aa13.95□□□□□ -0.18
TRIM2-209ENST00000494872 RFX5P48382 616 aaPredicted RBP13.95□□□□□ -0.18
TRIM2-209ENST00000494872 CCDC144BQ3MJ40 725 aa13.95□□□□□ -0.18
TRIM2-209ENST00000494872 CEP135Q66GS9 1140 aa13.95□□□□□ -0.18
TRIM2-209ENST00000494872 CCDC144CPQ8IYA2 1237 aa13.95□□□□□ -0.18
TRIM2-209ENST00000494872 FMNL2Q96PY5 1086 aa13.95□□□□□ -0.18
TRIM2-209ENST00000494872 USP16Q9Y5T5 823 aa13.95□□□□□ -0.18
TRIM2-209ENST00000494872 MEGF6O75095 1541 aa13.95□□□□□ -0.18
TRIM2-209ENST00000494872 PFKFB2O60825 505 aa13.94□□□□□ -0.18
TRIM2-209ENST00000494872 HSP90B1P14625 803 aaKnown RBP13.94□□□□□ -0.18
TRIM2-209ENST00000494872 ATF3P18847 181 aa13.94□□□□□ -0.18
TRIM2-209ENST00000494872 KCND1Q9NSA2 647 aa13.94□□□□□ -0.18
TRIM2-209ENST00000494872 MYH15Q9Y2K3 1946 aa13.94□□□□□ -0.18
TRIM2-209ENST00000494872 ADD1P35611 737 aaKnown RBP13.94□□□□□ -0.18
TRIM2-209ENST00000494872 RABL6Q3YEC7 729 aaPredicted RBP13.94□□□□□ -0.18
TRIM2-209ENST00000494872 TNNI3KQ59H18 835 aa13.94□□□□□ -0.18
TRIM2-209ENST00000494872 FPGT-TNNI3KV9GXZ4 949 aa13.94□□□□□ -0.18
TRIM2-209ENST00000494872 PTPN12Q05209 780 aaKnown RBP13.93□□□□□ -0.18
TRIM2-209ENST00000494872 MCMDC2Q4G0Z9 681 aa13.93□□□□□ -0.18
TRIM2-209ENST00000494872 CCDC73Q6ZRK6 1079 aa13.93□□□□□ -0.18
TRIM2-209ENST00000494872 TICAM2Q86XR7 235 aa13.93□□□□□ -0.18
TRIM2-209ENST00000494872 CCAR1Q8IX12 1150 aaKnown RBP13.93□□□□□ -0.18
TRIM2-209ENST00000494872 CHMP4CQ96CF2 233 aa13.93□□□□□ -0.18
TRIM2-209ENST00000494872 ZNF396Q96N95 335 aaPredicted RBP13.93□□□□□ -0.18
TRIM2-209ENST00000494872 ANO10Q9NW15 660 aa13.93□□□□□ -0.18
TRIM2-209ENST00000494872 BECN2A8MW95 431 aa13.92□□□□□ -0.18
TRIM2-209ENST00000494872 GABPB1Q06547 395 aaPredicted RBP13.92□□□□□ -0.18
TRIM2-209ENST00000494872 SCRN1Q12765 414 aa13.92□□□□□ -0.18
TRIM2-209ENST00000494872 TFCP2Q12800 502 aa13.92□□□□□ -0.18
TRIM2-209ENST00000494872 C11orf57Q6ZUT1 292 aaPredicted RBP13.92□□□□□ -0.18
TRIM2-209ENST00000494872 NYAP1Q6ZVC0 841 aa13.92□□□□□ -0.18
TRIM2-209ENST00000494872 DDX41Q9UJV9 622 aaKnown RBP13.92□□□□□ -0.18
TRIM2-209ENST00000494872 COL18A1P39060 1754 aa13.92□□□□□ -0.18
TRIM2-209ENST00000494872 ZNF609O15014 1411 aa13.92□□□□□ -0.18
TRIM2-209ENST00000494872 KIF2AO00139 706 aaPredicted RBP13.92□□□□□ -0.18
TRIM2-209ENST00000494872 CYP27B1O15528 508 aa13.92□□□□□ -0.18
TRIM2-209ENST00000494872 CYP21A2P08686 494 aa13.92□□□□□ -0.18
TRIM2-209ENST00000494872 CABP4P57796 275 aa13.92□□□□□ -0.18
TRIM2-209ENST00000494872 PTPN14Q15678 1187 aa13.92□□□□□ -0.18
TRIM2-209ENST00000494872 DBNLQ9UJU6 430 aaKnown RBP13.92□□□□□ -0.18
TRIM2-209ENST00000494872 KINO60870 393 aaKnown RBP13.91□□□□□ -0.18
TRIM2-209ENST00000494872 FAM160A1Q05DH4 1040 aa13.91□□□□□ -0.18
TRIM2-209ENST00000494872 SNW1Q13573 536 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms