RNA–Protein interactions for RNA: ENST00000494572.1

KRTCAP3-206, Transcript of keratinocyte associated protein 3, humanhuman

TSL 3

Gene KRTCAP3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-206ENST00000494572 TM4SF1P30408 202 aa13.66□□□□□ -0.22
KRTCAP3-206ENST00000494572 ST5P78524 1137 aa13.66□□□□□ -0.22
KRTCAP3-206ENST00000494572 ATP2B3Q16720 1220 aa13.66□□□□□ -0.22
KRTCAP3-206ENST00000494572 CCDC158Q5M9N0 1113 aa13.66□□□□□ -0.22
KRTCAP3-206ENST00000494572 C3orf67Q6ZVT6 689 aa13.66□□□□□ -0.22
KRTCAP3-206ENST00000494572 EVI5LQ96CN4 794 aa13.66□□□□□ -0.22
KRTCAP3-206ENST00000494572 C22orf23Q9BZE7 217 aa13.66□□□□□ -0.22
KRTCAP3-206ENST00000494572 CHMLP26374 656 aa13.65□□□□□ -0.22
KRTCAP3-206ENST00000494572 TTC39AQ5SRH9 613 aa13.65□□□□□ -0.22
KRTCAP3-206ENST00000494572 DDX46Q7L014 1031 aaKnown RBP13.65□□□□□ -0.22
KRTCAP3-206ENST00000494572 HELBQ8NG08 1087 aaPredicted RBP13.65□□□□□ -0.22
KRTCAP3-206ENST00000494572 ABCC12Q96J65 1359 aa13.65□□□□□ -0.22
KRTCAP3-206ENST00000494572 SCN7AQ01118 1682 aa13.64□□□□□ -0.23
KRTCAP3-206ENST00000494572 PDE8BO95263 885 aa13.64□□□□□ -0.23
KRTCAP3-206ENST00000494572 XAGE2Q96GT9 111 aa13.64□□□□□ -0.23
KRTCAP3-206ENST00000494572 TBC1D32Q96NH3 1257 aa13.64□□□□□ -0.23
KRTCAP3-206ENST00000494572 REC8O95072 547 aa13.63□□□□□ -0.23
KRTCAP3-206ENST00000494572 SLC5A1P13866 664 aa13.63□□□□□ -0.23
KRTCAP3-206ENST00000494572 ADORA1P30542 326 aa13.63□□□□□ -0.23
KRTCAP3-206ENST00000494572 RPS8P62241 208 aaKnown RBP13.63□□□□□ -0.23
KRTCAP3-206ENST00000494572 PUM3Q15397 648 aaKnown RBP13.63□□□□□ -0.23
KRTCAP3-206ENST00000494572 SLC15A2Q16348 729 aa13.63□□□□□ -0.23
KRTCAP3-206ENST00000494572 PRR5LQ6MZQ0 368 aa13.63□□□□□ -0.23
KRTCAP3-206ENST00000494572 DDRGK1Q96HY6 314 aa13.63□□□□□ -0.23
KRTCAP3-206ENST00000494572 DNAJC2Q99543 621 aaKnown RBP13.63□□□□□ -0.23
KRTCAP3-206ENST00000494572 HAUS7Q99871 368 aa13.63□□□□□ -0.23
KRTCAP3-206ENST00000494572 BSDC1Q9NW68 430 aaPredicted RBP13.63□□□□□ -0.23
KRTCAP3-206ENST00000494572 HIP1O00291 1037 aa13.62□□□□□ -0.23
KRTCAP3-206ENST00000494572 POLRMTO00411 1230 aaKnown RBP13.62□□□□□ -0.23
KRTCAP3-206ENST00000494572 IFIT1P09914 478 aaKnown RBP13.62□□□□□ -0.23
KRTCAP3-206ENST00000494572 CHRNDQ07001 517 aa13.62□□□□□ -0.23
KRTCAP3-206ENST00000494572 VGLL2Q8N8G2 317 aa13.62□□□□□ -0.23
KRTCAP3-206ENST00000494572 RUFY2Q8WXA3 655 aa13.62□□□□□ -0.23
KRTCAP3-206ENST00000494572 LPIN2Q92539 896 aa13.62□□□□□ -0.23
KRTCAP3-206ENST00000494572 ESYT1Q9BSJ8 1104 aa13.62□□□□□ -0.23
KRTCAP3-206ENST00000494572 FSD1Q9BTV5 496 aa13.62□□□□□ -0.23
KRTCAP3-206ENST00000494572 DIAPH3Q9NSV4 1193 aa13.62□□□□□ -0.23
KRTCAP3-206ENST00000494572 PARP3Q9Y6F1 533 aa13.62□□□□□ -0.23
KRTCAP3-206ENST00000494572 ZNF609O15014 1411 aa13.62□□□□□ -0.23
KRTCAP3-206ENST00000494572 PNPLA7Q6ZV29 1317 aa13.62□□□□□ -0.23
KRTCAP3-206ENST00000494572 UBR3Q6ZT12 1888 aa13.61□□□□□ -0.23
KRTCAP3-206ENST00000494572 TAF5LO75529 589 aa13.61□□□□□ -0.23
KRTCAP3-206ENST00000494572 DDR1Q08345 913 aa13.61□□□□□ -0.23
KRTCAP3-206ENST00000494572 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.61□□□□□ -0.23
KRTCAP3-206ENST00000494572 RPGRQ92834 1020 aaKnown RBP13.61□□□□□ -0.23
KRTCAP3-206ENST00000494572 CELF1Q92879 486 aaKnown RBP13.61□□□□□ -0.23
KRTCAP3-206ENST00000494572 RBM17Q96I25 401 aaKnown RBP13.61□□□□□ -0.23
KRTCAP3-206ENST00000494572 IPO9Q96P70 1041 aaKnown RBP13.61□□□□□ -0.23
KRTCAP3-206ENST00000494572 FGFR2P21802 821 aa13.6□□□□□ -0.23
KRTCAP3-206ENST00000494572 KIAA1211Q6ZU35 1233 aa13.6□□□□□ -0.23
KRTCAP3-206ENST00000494572 ZNF784Q8NCA9 323 aaPredicted RBP13.6□□□□□ -0.23
KRTCAP3-206ENST00000494572 EDC3Q96F86 508 aaKnown RBP13.6□□□□□ -0.23
KRTCAP3-206ENST00000494572 USP26Q9BXU7 913 aa13.6□□□□□ -0.23
KRTCAP3-206ENST00000494572 MINPP1Q9UNW1 487 aa13.6□□□□□ -0.23
KRTCAP3-206ENST00000494572 MYH3P11055 1940 aa13.6□□□□□ -0.23
KRTCAP3-206ENST00000494572 RIC1Q4ADV7 1423 aa13.59□□□□□ -0.23
KRTCAP3-206ENST00000494572 DCAF8L1A6NGE4 600 aa13.59□□□□□ -0.23
KRTCAP3-206ENST00000494572 GOLIM4O00461 696 aa13.59□□□□□ -0.23
KRTCAP3-206ENST00000494572 MMP10P09238 476 aa13.59□□□□□ -0.23
KRTCAP3-206ENST00000494572 UQCRFS1P1P0C7P4 283 aa13.59□□□□□ -0.23
KRTCAP3-206ENST00000494572 FKBP4Q02790 459 aaKnown RBP eCLIP13.59□□□□□ -0.23
KRTCAP3-206ENST00000494572 MSL1Q68DK7 614 aa13.59□□□□□ -0.23
KRTCAP3-206ENST00000494572 CWC27Q6UX04 472 aaKnown RBP13.59□□□□□ -0.23
KRTCAP3-206ENST00000494572 ANKRD2Q9GZV1 360 aa13.59□□□□□ -0.23
KRTCAP3-206ENST00000494572 ANO8Q9HCE9 1232 aaPredicted RBP13.59□□□□□ -0.23
KRTCAP3-206ENST00000494572 PAG1Q9NWQ8 432 aa13.59□□□□□ -0.23
KRTCAP3-206ENST00000494572 DAXXQ9UER7 740 aaPredicted RBP13.59□□□□□ -0.23
KRTCAP3-206ENST00000494572 C4AP0C0L4 1744 aa13.59□□□□□ -0.23
KRTCAP3-206ENST00000494572 KCNJ4P48050 445 aa13.58□□□□□ -0.24
KRTCAP3-206ENST00000494572 RBM25P49756 843 aaKnown RBP13.58□□□□□ -0.24
KRTCAP3-206ENST00000494572 GRAPQ13588 217 aa13.58□□□□□ -0.24
KRTCAP3-206ENST00000494572 CCDC102BQ68D86 513 aa13.58□□□□□ -0.24
KRTCAP3-206ENST00000494572 GRAPLQ8TC17 118 aaPredicted RBP13.58□□□□□ -0.24
KRTCAP3-206ENST00000494572 ANO2Q9NQ90 1003 aa13.58□□□□□ -0.24
KRTCAP3-206ENST00000494572 SNRKQ9NRH2 765 aa13.58□□□□□ -0.24
KRTCAP3-206ENST00000494572 NDUFB9Q9Y6M9 179 aa13.58□□□□□ -0.24
KRTCAP3-206ENST00000494572 DDX60Q8IY21 1712 aaKnown RBP13.58□□□□□ -0.24
KRTCAP3-206ENST00000494572 TNS1Q9HBL0 1735 aaKnown RBP13.57□□□□□ -0.24
KRTCAP3-206ENST00000494572 SNAP23O00161 211 aa13.57□□□□□ -0.24
KRTCAP3-206ENST00000494572 SGSM2O43147 1006 aa13.57□□□□□ -0.24
KRTCAP3-206ENST00000494572 MCCP23508 829 aa13.57□□□□□ -0.24
KRTCAP3-206ENST00000494572 UBE4AQ14139 1066 aa13.57□□□□□ -0.24
KRTCAP3-206ENST00000494572 LRRFIP1Q32MZ4 808 aaKnown RBP13.57□□□□□ -0.24
KRTCAP3-206ENST00000494572 ZNF512BQ96KM6 892 aaPredicted RBP13.57□□□□□ -0.24
KRTCAP3-206ENST00000494572 BRIP1Q9BX63 1249 aa13.57□□□□□ -0.24
KRTCAP3-206ENST00000494572 COL24A1Q17RW2 1714 aa13.56□□□□□ -0.24
KRTCAP3-206ENST00000494572 BBOX1O75936 387 aa13.56□□□□□ -0.24
KRTCAP3-206ENST00000494572 PHKA1P46020 1223 aa13.56□□□□□ -0.24
KRTCAP3-206ENST00000494572 C1QTNF8P60827 252 aa13.56□□□□□ -0.24
KRTCAP3-206ENST00000494572 NMIQ13287 307 aaPredicted RBP13.56□□□□□ -0.24
KRTCAP3-206ENST00000494572 KBTBD3Q8NAB2 608 aa13.56□□□□□ -0.24
KRTCAP3-206ENST00000494572 PPP1R1BQ9UD71 204 aaPredicted RBP13.56□□□□□ -0.24
KRTCAP3-206ENST00000494572 PDE6BP35913 854 aa13.55□□□□□ -0.24
KRTCAP3-206ENST00000494572 ZAP70P43403 619 aa13.55□□□□□ -0.24
KRTCAP3-206ENST00000494572 BCAMP50895 628 aa13.55□□□□□ -0.24
KRTCAP3-206ENST00000494572 SCARF1Q14162 830 aa13.55□□□□□ -0.24
KRTCAP3-206ENST00000494572 BECN1Q14457 450 aa13.55□□□□□ -0.24
KRTCAP3-206ENST00000494572 CRY2Q49AN0 593 aa13.55□□□□□ -0.24
KRTCAP3-206ENST00000494572 CAVIN4Q5BKX8 364 aa13.55□□□□□ -0.24
KRTCAP3-206ENST00000494572 TICAM2Q86XR7 235 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms