RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 PDCD2Q16342 344 aaPredicted RBP4.67□□□□□ -1.66
ATG3-207ENST00000494571 LONRF2Q1L5Z9 754 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 CHD1LQ86WJ1 897 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 TRMT2AQ8IZ69 625 aaKnown RBP4.67□□□□□ -1.66
ATG3-207ENST00000494571 B4GALNT2Q8NHY0 566 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 STAG1Q8WVM7 1258 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 JPH4Q96JJ6 628 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 FMNL2Q96PY5 1086 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 HS3ST6Q96QI5 342 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 TEX13AQ9BXU3 409 aaPredicted RBP4.67□□□□□ -1.66
ATG3-207ENST00000494571 IRX2Q9BZI1 471 aaPredicted RBP4.67□□□□□ -1.66
ATG3-207ENST00000494571 TSGA10Q9BZW7 698 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 FAM204AQ9H8W3 233 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.67□□□□□ -1.66
ATG3-207ENST00000494571 CPS1P31327 1500 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 ARHGAP35Q9NRY4 1499 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 MIA2Q96PC5 1412 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 ZNF521Q96K83 1311 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.66□□□□□ -1.66
ATG3-207ENST00000494571 APBB1O00213 710 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 CHUKO15111 745 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 CDC45O75419 566 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 CDKL5O76039 1030 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 BRD1O95696 1058 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 MAGEA10P43363 369 aaPredicted RBP4.66□□□□□ -1.66
ATG3-207ENST00000494571 RAB27AP51159 221 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 DBN1Q16643 649 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 CEP85LQ5SZL2 805 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 DDX46Q7L014 1031 aaKnown RBP4.66□□□□□ -1.66
ATG3-207ENST00000494571 DZIP1LQ8IYY4 767 aaKnown RBP4.66□□□□□ -1.66
ATG3-207ENST00000494571 PHC3Q8NDX5 983 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 BICD1Q96G01 975 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 TSPAN18Q96SJ8 248 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 FUT8Q9BYC5 575 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 PARD6BQ9BYG5 372 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 FAM107BQ9H098 131 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 CBX8Q9HC52 389 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 BLOC1S6Q9UL45 172 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 DISP1Q96F81 1524 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 PLEKHH2Q8IVE3 1493 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 HFM1A2PYH4 1435 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 YEATS2Q9ULM3 1422 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 ROCK1Q13464 1354 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 SYNMO15061 1565 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 NAT1P18440 290 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 GNAI1P63096 354 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 TYRO3Q06418 890 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 APOBRQ0VD83 1088 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 BMP2KLQ5H9B9 411 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 TRIM42Q8IWZ5 723 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 DRAXINQ8NBI3 349 aaPredicted RBP4.66□□□□□ -1.66
ATG3-207ENST00000494571 EZH1Q92800 747 aaPredicted RBP4.66□□□□□ -1.66
ATG3-207ENST00000494571 STK31Q9BXU1 1019 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 UBXN6Q9BZV1 441 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 C1orf115Q9H7X2 142 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 PCDHGA4Q9Y5G9 962 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 COL17A1Q9UMD9 1497 aaPredicted RBP4.66□□□□□ -1.66
ATG3-207ENST00000494571 ARHGAP31Q2M1Z3 1444 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 KIF27Q86VH2 1401 aa4.66□□□□□ -1.66
ATG3-207ENST00000494571 GOLGA6L19H0YKK7 550 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 SGSM2O43147 1006 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 RTN2O75298 545 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 EIF3JO75822 258 aaKnown RBP4.65□□□□□ -1.66
ATG3-207ENST00000494571 KIAA0754O94854 1291 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 UPP2O95045 317 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 FMNL1O95466 1100 aaPredicted RBP4.65□□□□□ -1.66
ATG3-207ENST00000494571 EZRP15311 586 aaKnown RBP4.65□□□□□ -1.66
ATG3-207ENST00000494571 CDR1P51861 262 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 MECOMQ03112 1051 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 GNPTABQ3T906 1256 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 PREPLQ4J6C6 727 aaPredicted RBP4.65□□□□□ -1.66
ATG3-207ENST00000494571 HSP90AB4PQ58FF6 505 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 CCDC158Q5M9N0 1113 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 RNF187Q5TA31 235 aaPredicted RBP4.65□□□□□ -1.66
ATG3-207ENST00000494571 GET4Q7L5D6 327 aaPredicted RBP4.65□□□□□ -1.66
ATG3-207ENST00000494571 TMC6Q7Z403 805 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 CCDC114Q96M63 670 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 LARP6Q9BRS8 491 aaKnown RBP4.65□□□□□ -1.66
ATG3-207ENST00000494571 PHACTR1Q9C0D0 580 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 DNAJC25Q9H1X3 360 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 RTEL1Q9NZ71 1219 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 MADDQ8WXG6 1647 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 CTTNBP2Q8WZ74 1663 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 ELP1O95163 1332 aa4.65□□□□□ -1.66
ATG3-207ENST00000494571 GOLGA6L4A6NEF3 574 aa4.65□□□□□ -1.67
ATG3-207ENST00000494571 NRDCO43847 1150 aa4.65□□□□□ -1.67
ATG3-207ENST00000494571 HMMRO75330 724 aa4.65□□□□□ -1.67
ATG3-207ENST00000494571 TADA3O75528 432 aa4.65□□□□□ -1.67
ATG3-207ENST00000494571 PDHBP11177 359 aa4.65□□□□□ -1.67
ATG3-207ENST00000494571 UBE2HP62256 183 aa4.65□□□□□ -1.67
ATG3-207ENST00000494571 CCDC15Q0P6D6 951 aa4.65□□□□□ -1.67
ATG3-207ENST00000494571 TMEM62Q0P6H9 643 aa4.65□□□□□ -1.67
ATG3-207ENST00000494571 RRP12Q5JTH9 1297 aaKnown RBP4.65□□□□□ -1.67
ATG3-207ENST00000494571 HDGFL1Q5TGJ6 251 aa4.65□□□□□ -1.67
ATG3-207ENST00000494571 KIAA1328Q86T90 577 aa4.65□□□□□ -1.67
ATG3-207ENST00000494571 NCAPG2Q86XI2 1143 aa4.65□□□□□ -1.67
ATG3-207ENST00000494571 LMBR1Q8WVP7 490 aa4.65□□□□□ -1.67
ATG3-207ENST00000494571 TBC1D5Q92609 795 aa4.65□□□□□ -1.67
ATG3-207ENST00000494571 TACO1Q9BSH4 297 aaKnown RBP4.65□□□□□ -1.67
ATG3-207ENST00000494571 TRIM4Q9C037 500 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms