RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 CCDC102BQ68D86 513 aa13.48□□□□□ -0.25
COL25A1-204ENST00000494183 ZNF397Q8NF99 534 aaPredicted RBP13.48□□□□□ -0.25
COL25A1-204ENST00000494183 CPLX3Q8WVH0 158 aa13.48□□□□□ -0.25
COL25A1-204ENST00000494183 CALML4Q96GE6 196 aa13.48□□□□□ -0.25
COL25A1-204ENST00000494183 A0A1B0GUL7 405 aa13.48□□□□□ -0.25
COL25A1-204ENST00000494183 TOP1P11387 765 aaKnown RBP13.48□□□□□ -0.25
COL25A1-204ENST00000494183 CHMLP26374 656 aa13.48□□□□□ -0.25
COL25A1-204ENST00000494183 UBE2HP62256 183 aa13.48□□□□□ -0.25
COL25A1-204ENST00000494183 FKBP15Q5T1M5 1219 aa13.48□□□□□ -0.25
COL25A1-204ENST00000494183 CACNA2D4Q7Z3S7 1137 aa13.48□□□□□ -0.25
COL25A1-204ENST00000494183 MAST1Q9Y2H9 1570 aa13.47□□□□□ -0.25
COL25A1-204ENST00000494183 OTUD7AQ8TE49 926 aaPredicted RBP13.47□□□□□ -0.25
COL25A1-204ENST00000494183 HDAC9Q9UKV0 1011 aa13.47□□□□□ -0.25
COL25A1-204ENST00000494183 AXDND1Q5T1B0 1012 aaPredicted RBP13.47□□□□□ -0.25
COL25A1-204ENST00000494183 TSG101Q99816 390 aa13.47□□□□□ -0.25
COL25A1-204ENST00000494183 RBM27Q9P2N5 1060 aaKnown RBP13.47□□□□□ -0.25
COL25A1-204ENST00000494183 SAMM50Q9Y512 469 aa13.47□□□□□ -0.25
COL25A1-204ENST00000494183 ABCA5Q8WWZ7 1642 aa13.47□□□□□ -0.25
COL25A1-204ENST00000494183 ITGA6P23229 1130 aa13.47□□□□□ -0.25
COL25A1-204ENST00000494183 CCDC191Q8NCU4 936 aa13.47□□□□□ -0.25
COL25A1-204ENST00000494183 USP19O94966 1318 aa13.47□□□□□ -0.25
COL25A1-204ENST00000494183 DBNDD2Q9BQY9 259 aa13.46□□□□□ -0.25
COL25A1-204ENST00000494183 RBM10P98175 930 aaKnown RBP13.46□□□□□ -0.25
COL25A1-204ENST00000494183 ZSCAN30Q86W11 494 aa13.46□□□□□ -0.25
COL25A1-204ENST00000494183 CNBD1Q8NA66 436 aa13.46□□□□□ -0.25
COL25A1-204ENST00000494183 ZNF594Q96JF6 807 aaPredicted RBP13.46□□□□□ -0.25
COL25A1-204ENST00000494183 RBM26Q5T8P6 1007 aaKnown RBP13.46□□□□□ -0.25
COL25A1-204ENST00000494183 CREB3L3Q68CJ9 461 aa13.46□□□□□ -0.25
COL25A1-204ENST00000494183 EHMT1Q9H9B1 1298 aa13.46□□□□□ -0.25
COL25A1-204ENST00000494183 NEO1Q92859 1461 aa13.46□□□□□ -0.26
COL25A1-204ENST00000494183 GNAQP50148 359 aa13.46□□□□□ -0.26
COL25A1-204ENST00000494183 PPP4R3AQ6IN85 833 aa13.46□□□□□ -0.26
COL25A1-204ENST00000494183 VEZTQ9HBM0 779 aa13.46□□□□□ -0.26
COL25A1-204ENST00000494183 KIF20AO95235 890 aa13.45□□□□□ -0.26
COL25A1-204ENST00000494183 LDHBP07195 334 aaKnown RBP13.45□□□□□ -0.26
COL25A1-204ENST00000494183 LIG1P18858 919 aa13.45□□□□□ -0.26
COL25A1-204ENST00000494183 SSR1P43307 286 aaKnown RBP13.45□□□□□ -0.26
COL25A1-204ENST00000494183 CCDC24Q8N4L8 307 aa13.45□□□□□ -0.26
COL25A1-204ENST00000494183 PARP10Q53GL7 1025 aa13.45□□□□□ -0.26
COL25A1-204ENST00000494183 TCERG1LQ5VWI1 586 aa13.45□□□□□ -0.26
COL25A1-204ENST00000494183 CLIP2Q9UDT6 1046 aa13.45□□□□□ -0.26
COL25A1-204ENST00000494183 SEC24BO95487 1268 aa13.45□□□□□ -0.26
COL25A1-204ENST00000494183 AK2P54819 239 aa13.45□□□□□ -0.26
COL25A1-204ENST00000494183 AMPD3Q01432 767 aa13.45□□□□□ -0.26
COL25A1-204ENST00000494183 GIMAP6Q6P9H5 292 aa13.45□□□□□ -0.26
COL25A1-204ENST00000494183 HEATR3Q7Z4Q2 680 aa13.45□□□□□ -0.26
COL25A1-204ENST00000494183 ANKRD2Q9GZV1 360 aa13.45□□□□□ -0.26
COL25A1-204ENST00000494183 JDP2Q8WYK2 163 aa13.44□□□□□ -0.26
COL25A1-204ENST00000494183 ERLIN2O94905 339 aa13.44□□□□□ -0.26
COL25A1-204ENST00000494183 GNAT2P19087 354 aa13.44□□□□□ -0.26
COL25A1-204ENST00000494183 SYKP43405 635 aa13.44□□□□□ -0.26
COL25A1-204ENST00000494183 EIF4A1P60842 406 aaKnown RBP13.44□□□□□ -0.26
COL25A1-204ENST00000494183 KLHL40Q2TBA0 621 aa13.44□□□□□ -0.26
COL25A1-204ENST00000494183 PNMA6EA0A0J9YXQ4 647 aa13.44□□□□□ -0.26
COL25A1-204ENST00000494183 FGFR1OPO95684 399 aaKnown RBP13.44□□□□□ -0.26
COL25A1-204ENST00000494183 PRKCSHP14314 528 aaPredicted RBP13.44□□□□□ -0.26
COL25A1-204ENST00000494183 MTIF2P46199 727 aaKnown RBP13.44□□□□□ -0.26
COL25A1-204ENST00000494183 SETQ01105 290 aaPredicted RBP13.44□□□□□ -0.26
COL25A1-204ENST00000494183 APOBRQ0VD83 1088 aa13.44□□□□□ -0.26
COL25A1-204ENST00000494183 SPA17Q15506 151 aa13.44□□□□□ -0.26
COL25A1-204ENST00000494183 CNPY2Q9Y2B0 182 aa13.44□□□□□ -0.26
COL25A1-204ENST00000494183 MAGI3Q5TCQ9 1506 aa13.44□□□□□ -0.26
COL25A1-204ENST00000494183 MARCKSP29966 332 aaPredicted RBP13.44□□□□□ -0.26
COL25A1-204ENST00000494183 CCDC178Q5BJE1 867 aa13.44□□□□□ -0.26
COL25A1-204ENST00000494183 NBPF14Q5TI25 921 aa13.44□□□□□ -0.26
COL25A1-204ENST00000494183 DHX32Q7L7V1 743 aaKnown RBP13.44□□□□□ -0.26
COL25A1-204ENST00000494183 PBRM1Q86U86 1689 aa13.44□□□□□ -0.26
COL25A1-204ENST00000494183 CPA1P15085 419 aa13.43□□□□□ -0.26
COL25A1-204ENST00000494183 MTERF4Q7Z6M4 381 aaKnown RBP13.43□□□□□ -0.26
COL25A1-204ENST00000494183 IL17REQ8NFR9 667 aa13.43□□□□□ -0.26
COL25A1-204ENST00000494183 ARHGEF10O15013 1369 aa13.43□□□□□ -0.26
COL25A1-204ENST00000494183 RXRAP19793 462 aa13.43□□□□□ -0.26
COL25A1-204ENST00000494183 DNM1Q05193 864 aaKnown RBP13.43□□□□□ -0.26
COL25A1-204ENST00000494183 GCKRQ14397 625 aa13.43□□□□□ -0.26
COL25A1-204ENST00000494183 PTPN14Q15678 1187 aa13.43□□□□□ -0.26
COL25A1-204ENST00000494183 KRI1Q8N9T8 703 aaKnown RBP13.43□□□□□ -0.26
COL25A1-204ENST00000494183 TAF4BQ92750 862 aa13.43□□□□□ -0.26
COL25A1-204ENST00000494183 PLCG2P16885 1265 aa13.43□□□□□ -0.26
COL25A1-204ENST00000494183 SUCLG2Q96I99 432 aa13.43□□□□□ -0.26
COL25A1-204ENST00000494183 CCDC171Q6TFL3 1326 aa13.43□□□□□ -0.26
COL25A1-204ENST00000494183 KCNQ3O43525 872 aa13.43□□□□□ -0.26
COL25A1-204ENST00000494183 PDE8AO60658 829 aa13.43□□□□□ -0.26
COL25A1-204ENST00000494183 MBD4O95243 580 aa13.43□□□□□ -0.26
COL25A1-204ENST00000494183 TNNI3KQ59H18 835 aa13.43□□□□□ -0.26
COL25A1-204ENST00000494183 NUP88Q99567 741 aaPredicted RBP13.43□□□□□ -0.26
COL25A1-204ENST00000494183 FPGT-TNNI3KV9GXZ4 949 aa13.43□□□□□ -0.26
COL25A1-204ENST00000494183 NEFHP12036 1026 aa13.42□□□□□ -0.26
COL25A1-204ENST00000494183 STX1AQ16623 288 aa13.42□□□□□ -0.26
COL25A1-204ENST00000494183 TDRD12Q587J7 1177 aaKnown RBP13.42□□□□□ -0.26
COL25A1-204ENST00000494183 MBD5Q9P267 1494 aa13.42□□□□□ -0.26
COL25A1-204ENST00000494183 POLD1P28340 1107 aa13.42□□□□□ -0.26
COL25A1-204ENST00000494183 AFMP43652 599 aa13.42□□□□□ -0.26
COL25A1-204ENST00000494183 NAPAP54920 295 aa13.42□□□□□ -0.26
COL25A1-204ENST00000494183 CCDC148Q8NFR7 591 aa13.42□□□□□ -0.26
COL25A1-204ENST00000494183 MAP7D2Q96T17 732 aa13.42□□□□□ -0.26
COL25A1-204ENST00000494183 EYA3Q99504 573 aa13.42□□□□□ -0.26
COL25A1-204ENST00000494183 KANK3Q6NY19 840 aa13.42□□□□□ -0.26
COL25A1-204ENST00000494183 UBXN4Q92575 508 aa13.42□□□□□ -0.26
COL25A1-204ENST00000494183 CCDC87Q9NVE4 849 aa13.42□□□□□ -0.26
COL25A1-204ENST00000494183 TAF5LO75529 589 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms