RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 GALNT12Q8IXK2 581 aa6.44□□□□□ -1.38
GTF3A-208ENST00000493903 VWA5B2Q8N398 1253 aa6.44□□□□□ -1.38
GTF3A-208ENST00000493903 SUSD3Q96L08 255 aa6.44□□□□□ -1.38
GTF3A-208ENST00000493903 BCO2Q9BYV7 579 aa6.44□□□□□ -1.38
GTF3A-208ENST00000493903 GPAMQ9HCL2 828 aa6.44□□□□□ -1.38
GTF3A-208ENST00000493903 A0A1B0GTH6 734 aa6.43□□□□□ -1.38
GTF3A-208ENST00000493903 TATP17735 454 aaPredicted RBP6.43□□□□□ -1.38
GTF3A-208ENST00000493903 HSD3B2P26439 372 aa6.43□□□□□ -1.38
GTF3A-208ENST00000493903 GSTT1P30711 240 aa6.43□□□□□ -1.38
GTF3A-208ENST00000493903 INPP5BP32019 993 aa6.43□□□□□ -1.38
GTF3A-208ENST00000493903 GMPRP36959 345 aa6.43□□□□□ -1.38
GTF3A-208ENST00000493903 NLGN1Q8N2Q7 840 aa6.43□□□□□ -1.38
GTF3A-208ENST00000493903 GPR161Q8N6U8 529 aaKnown RBP6.43□□□□□ -1.38
GTF3A-208ENST00000493903 ANKRD24Q8TF21 1146 aa6.43□□□□□ -1.38
GTF3A-208ENST00000493903 PMEPA1Q969W9 287 aa6.43□□□□□ -1.38
GTF3A-208ENST00000493903 MRFAP1L1Q96HT8 127 aa6.43□□□□□ -1.38
GTF3A-208ENST00000493903 SUV39H2Q9H5I1 410 aa6.43□□□□□ -1.38
GTF3A-208ENST00000493903 ELP3Q9H9T3 547 aa6.43□□□□□ -1.38
GTF3A-208ENST00000493903 C11orf16Q9NQ32 467 aa6.43□□□□□ -1.38
GTF3A-208ENST00000493903 PPP4R2Q9NY27 417 aa6.43□□□□□ -1.38
GTF3A-208ENST00000493903 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.43□□□□□ -1.38
GTF3A-208ENST00000493903 UBAP1LF5GYI3 381 aa6.42□□□□□ -1.38
GTF3A-208ENST00000493903 F11P03951 625 aa6.42□□□□□ -1.38
GTF3A-208ENST00000493903 XRCC5P13010 732 aaKnown RBP6.42□□□□□ -1.38
GTF3A-208ENST00000493903 BMS1Q14692 1282 aaKnown RBP6.42□□□□□ -1.38
GTF3A-208ENST00000493903 DBN1Q16643 649 aa6.42□□□□□ -1.38
GTF3A-208ENST00000493903 NXPE4Q6UWF7 544 aa6.42□□□□□ -1.38
GTF3A-208ENST00000493903 NANOS1Q8WY41 292 aaKnown RBP6.42□□□□□ -1.38
GTF3A-208ENST00000493903 AIDAQ96BJ3 306 aa6.42□□□□□ -1.38
GTF3A-208ENST00000493903 ZNF837Q96EG3 531 aaPredicted RBP6.42□□□□□ -1.38
GTF3A-208ENST00000493903 NPHS2Q9NP85 383 aa6.42□□□□□ -1.38
GTF3A-208ENST00000493903 STRIP2Q9ULQ0 834 aa6.42□□□□□ -1.38
GTF3A-208ENST00000493903 RTCBQ9Y3I0 505 aaKnown RBP6.42□□□□□ -1.38
GTF3A-208ENST00000493903 GADD45BO75293 160 aaPredicted RBP6.41□□□□□ -1.38
GTF3A-208ENST00000493903 RLBP1P12271 317 aa6.41□□□□□ -1.38
GTF3A-208ENST00000493903 EPB42P16452 691 aa6.41□□□□□ -1.38
GTF3A-208ENST00000493903 MSX1P28360 303 aa6.41□□□□□ -1.38
GTF3A-208ENST00000493903 SERINC3Q13530 473 aa6.41□□□□□ -1.38
GTF3A-208ENST00000493903 COL9A2Q14055 689 aaPredicted RBP6.41□□□□□ -1.38
GTF3A-208ENST00000493903 TRIP4Q15650 581 aaPredicted RBP6.41□□□□□ -1.38
GTF3A-208ENST00000493903 SV2AQ7L0J3 742 aa6.41□□□□□ -1.38
GTF3A-208ENST00000493903 JAZF1Q86VZ6 243 aa6.41□□□□□ -1.38
GTF3A-208ENST00000493903 KIAA0825Q8IV33 1275 aa6.41□□□□□ -1.38
GTF3A-208ENST00000493903 TRIM22Q8IYM9 498 aa6.41□□□□□ -1.38
GTF3A-208ENST00000493903 SPACA7Q96KW9 195 aa6.41□□□□□ -1.38
GTF3A-208ENST00000493903 SPON2Q9BUD6 331 aa6.41□□□□□ -1.38
GTF3A-208ENST00000493903 BRINP2Q9C0B6 783 aa6.41□□□□□ -1.38
GTF3A-208ENST00000493903 RUBCNLQ9H714 662 aa6.41□□□□□ -1.38
GTF3A-208ENST00000493903 COPRSQ9NQ92 184 aa6.41□□□□□ -1.38
GTF3A-208ENST00000493903 KBTBD4Q9NVX7 518 aa6.41□□□□□ -1.38
GTF3A-208ENST00000493903 TRAK1Q9UPV9 953 aa6.41□□□□□ -1.38
GTF3A-208ENST00000493903 KCNMB2Q9Y691 235 aa6.41□□□□□ -1.38
GTF3A-208ENST00000493903 K7ELQ4 463 aaPredicted RBP6.4□□□□□ -1.38
GTF3A-208ENST00000493903 SSBP05455 408 aaKnown RBP eCLIP6.4□□□□□ -1.38
GTF3A-208ENST00000493903 THBS1P07996 1170 aa6.4□□□□□ -1.38
GTF3A-208ENST00000493903 ATP4AP20648 1035 aa6.4□□□□□ -1.38
GTF3A-208ENST00000493903 TCEAL1Q15170 157 aa6.4□□□□□ -1.38
GTF3A-208ENST00000493903 BTLAQ7Z6A9 289 aa6.4□□□□□ -1.38
GTF3A-208ENST00000493903 RELL1Q8IUW5 271 aa6.4□□□□□ -1.38
GTF3A-208ENST00000493903 CMTR1Q8N1G2 835 aaKnown RBP6.4□□□□□ -1.38
GTF3A-208ENST00000493903 ZNF280CQ8ND82 737 aa6.4□□□□□ -1.38
GTF3A-208ENST00000493903 NEUROD4Q9HD90 331 aa6.4□□□□□ -1.38
GTF3A-208ENST00000493903 SIRPGQ9P1W8 387 aa6.4□□□□□ -1.38
GTF3A-208ENST00000493903 PPM1HQ9ULR3 514 aa6.4□□□□□ -1.38
GTF3A-208ENST00000493903 EGFRP00533 1210 aa6.39□□□□□ -1.39
GTF3A-208ENST00000493903 GRM2Q14416 872 aa6.39□□□□□ -1.39
GTF3A-208ENST00000493903 KIAA0319Q5VV43 1072 aa6.39□□□□□ -1.39
GTF3A-208ENST00000493903 NUCKS1Q9H1E3 243 aaKnown RBP6.39□□□□□ -1.39
GTF3A-208ENST00000493903 CHRDQ9H2X0 955 aa6.39□□□□□ -1.39
GTF3A-208ENST00000493903 TMEM63CQ9P1W3 806 aa6.39□□□□□ -1.39
GTF3A-208ENST00000493903 TTF2Q9UNY4 1162 aaKnown RBP6.39□□□□□ -1.39
GTF3A-208ENST00000493903 H7C1W4 665 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 GPR25O00155 361 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 ENPP3O14638 875 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 WIPF1O43516 503 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 KRT76Q01546 638 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 PTPROQ16827 1216 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 RNFT1Q5M7Z0 435 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 BICDL1Q6ZP65 573 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 LRP10Q7Z4F1 713 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 PGBD3Q8N328 593 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 ZCRB1Q8TBF4 217 aaKnown RBP6.38□□□□□ -1.39
GTF3A-208ENST00000493903 KCNB2Q92953 911 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 GTPBP3Q969Y2 492 aaKnown RBP6.38□□□□□ -1.39
GTF3A-208ENST00000493903 HSH2DQ96JZ2 352 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 TMEM74Q96NL1 305 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 COL25A1Q9BXS0 654 aaPredicted RBP6.38□□□□□ -1.39
GTF3A-208ENST00000493903 TMX1Q9H3N1 280 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 ZNF408Q9H9D4 720 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 KCNQ5Q9NR82 932 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 ABI2Q9NYB9 513 aaPredicted RBP6.38□□□□□ -1.39
GTF3A-208ENST00000493903 ADAMTS1Q9UHI8 967 aa6.38□□□□□ -1.39
GTF3A-208ENST00000493903 EREGO14944 169 aa6.37□□□□□ -1.39
GTF3A-208ENST00000493903 POLR3DP05423 398 aaPredicted RBP6.37□□□□□ -1.39
GTF3A-208ENST00000493903 IBSPP21815 317 aaPredicted RBP6.37□□□□□ -1.39
GTF3A-208ENST00000493903 EIF4A3P38919 411 aaKnown RBP6.37□□□□□ -1.39
GTF3A-208ENST00000493903 SOX9P48436 509 aa6.37□□□□□ -1.39
GTF3A-208ENST00000493903 NASPP49321 788 aaPredicted RBP6.37□□□□□ -1.39
GTF3A-208ENST00000493903 IGBP1P78318 339 aa6.37□□□□□ -1.39
GTF3A-208ENST00000493903 ARSJQ5FYB0 599 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms