RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 HAND2P61296 217 aa22.92■■□□□ 1.26
RNF40-203ENST00000493683 ATP8B2P98198 1209 aa22.92■■□□□ 1.26
RNF40-203ENST00000493683 ATL3Q6DD88 541 aa22.91■■□□□ 1.26
RNF40-203ENST00000493683 DDX46Q7L014 1031 aaKnown RBP22.91■■□□□ 1.26
RNF40-203ENST00000493683 FBF1Q8TES7 1133 aa22.91■■□□□ 1.26
RNF40-203ENST00000493683 EXOC5O00471 708 aa22.91■■□□□ 1.26
RNF40-203ENST00000493683 CCDC144CPQ8IYA2 1237 aa22.91■■□□□ 1.26
RNF40-203ENST00000493683 INTS4Q96HW7 963 aaKnown RBP22.91■■□□□ 1.26
RNF40-203ENST00000493683 ANKRD13DQ6ZTN6 518 aa22.91■■□□□ 1.26
RNF40-203ENST00000493683 A0A1W2PRG0 241 aa22.9■■□□□ 1.26
RNF40-203ENST00000493683 AMOTL2Q9Y2J4 779 aa22.9■■□□□ 1.26
RNF40-203ENST00000493683 KRT13P13646 458 aa22.9■■□□□ 1.26
RNF40-203ENST00000493683 CCDC152Q4G0S7 254 aa22.9■■□□□ 1.26
RNF40-203ENST00000493683 PPP1R14CQ8TAE6 165 aa22.9■■□□□ 1.26
RNF40-203ENST00000493683 SYT1P21579 422 aa22.9■■□□□ 1.26
RNF40-203ENST00000493683 SMC5Q8IY18 1101 aa22.9■■□□□ 1.26
RNF40-203ENST00000493683 DACT1Q9NYF0 836 aa22.9■■□□□ 1.26
RNF40-203ENST00000493683 NOS1P29475 1434 aa22.9■■□□□ 1.26
RNF40-203ENST00000493683 ASXL1Q8IXJ9 1541 aa22.9■■□□□ 1.26
RNF40-203ENST00000493683 MNAT1P51948 309 aa22.9■■□□□ 1.26
RNF40-203ENST00000493683 BICDL2A1A5D9 508 aa22.89■■□□□ 1.26
RNF40-203ENST00000493683 FMNL3Q8IVF7 1028 aa22.89■■□□□ 1.26
RNF40-203ENST00000493683 ANKS4BQ8N8V4 417 aa22.89■■□□□ 1.26
RNF40-203ENST00000493683 IL15P40933 162 aaPredicted RBP22.89■■□□□ 1.25
RNF40-203ENST00000493683 RTL1A6NKG5 1358 aa22.89■■□□□ 1.25
RNF40-203ENST00000493683 SPDYE4A6NLX3 237 aa22.89■■□□□ 1.25
RNF40-203ENST00000493683 XRCC6P12956 609 aaKnown RBP eCLIP22.89■■□□□ 1.25
RNF40-203ENST00000493683 IFIT1BQ5T764 474 aaKnown RBP22.89■■□□□ 1.25
RNF40-203ENST00000493683 NPHP3Q7Z494 1330 aa22.89■■□□□ 1.25
RNF40-203ENST00000493683 ATP2A1O14983 1001 aa22.89■■□□□ 1.25
RNF40-203ENST00000493683 LIG1P18858 919 aa22.89■■□□□ 1.25
RNF40-203ENST00000493683 CALML3P27482 149 aa22.89■■□□□ 1.25
RNF40-203ENST00000493683 ARFGAP2Q8N6H7 521 aa22.89■■□□□ 1.25
RNF40-203ENST00000493683 RAD50Q92878 1312 aa22.89■■□□□ 1.25
RNF40-203ENST00000493683 RTL9Q8NET4 1388 aa22.88■■□□□ 1.25
RNF40-203ENST00000493683 NUP160Q12769 1436 aa22.88■■□□□ 1.25
RNF40-203ENST00000493683 ZSWIM4Q9H7M6 989 aa22.88■■□□□ 1.25
RNF40-203ENST00000493683 SNRKQ9NRH2 765 aa22.88■■□□□ 1.25
RNF40-203ENST00000493683 DISP3Q9P2K9 1392 aa22.88■■□□□ 1.25
RNF40-203ENST00000493683 KIF4AO95239 1232 aa22.88■■□□□ 1.25
RNF40-203ENST00000493683 IQCGQ9H095 443 aaKnown RBP22.88■■□□□ 1.25
RNF40-203ENST00000493683 NESP48681 1621 aa22.88■■□□□ 1.25
RNF40-203ENST00000493683 KIF5AQ12840 1032 aa22.88■■□□□ 1.25
RNF40-203ENST00000493683 AOPEPQ8N6M6 819 aa22.88■■□□□ 1.25
RNF40-203ENST00000493683 GNAT2P19087 354 aa22.88■■□□□ 1.25
RNF40-203ENST00000493683 ISM2Q6H9L7 571 aa22.88■■□□□ 1.25
RNF40-203ENST00000493683 SPTLC2O15270 562 aa22.87■■□□□ 1.25
RNF40-203ENST00000493683 RAB3GAP1Q15042 981 aa22.87■■□□□ 1.25
RNF40-203ENST00000493683 BRAPQ7Z569 592 aa22.87■■□□□ 1.25
RNF40-203ENST00000493683 NECAB1Q8N987 351 aa22.87■■□□□ 1.25
RNF40-203ENST00000493683 TRIM75PA6NK02 468 aa22.87■■□□□ 1.25
RNF40-203ENST00000493683 CCDC129Q6ZRS4 1044 aa22.87■■□□□ 1.25
RNF40-203ENST00000493683 GPTP24298 496 aa22.86■■□□□ 1.25
RNF40-203ENST00000493683 TYRO3Q06418 890 aa22.86■■□□□ 1.25
RNF40-203ENST00000493683 COMMD10Q9Y6G5 202 aa22.86■■□□□ 1.25
RNF40-203ENST00000493683 Q6ZUG5 572 aa22.86■■□□□ 1.25
RNF40-203ENST00000493683 MRPL50Q8N5N7 158 aaKnown RBP22.86■■□□□ 1.25
RNF40-203ENST00000493683 VAT1LQ9HCJ6 419 aa22.86■■□□□ 1.25
RNF40-203ENST00000493683 FOXO3O43524 673 aa22.86■■□□□ 1.25
RNF40-203ENST00000493683 PABPN1LA6NDY0 278 aaKnown RBP22.85■■□□□ 1.25
RNF40-203ENST00000493683 SOS1Q07889 1333 aaPredicted RBP22.85■■□□□ 1.25
RNF40-203ENST00000493683 C6orf229H3BNL8 230 aa22.85■■□□□ 1.25
RNF40-203ENST00000493683 TSPY3P0CV98 308 aa22.85■■□□□ 1.25
RNF40-203ENST00000493683 TSPY8P0CW00 308 aa22.85■■□□□ 1.25
RNF40-203ENST00000493683 AFMP43652 599 aa22.85■■□□□ 1.25
RNF40-203ENST00000493683 DNAJC25Q9H1X3 360 aa22.85■■□□□ 1.25
RNF40-203ENST00000493683 SAMM50Q9Y512 469 aa22.85■■□□□ 1.25
RNF40-203ENST00000493683 GRIPAP1Q4V328 841 aa22.85■■□□□ 1.25
RNF40-203ENST00000493683 IBSPP21815 317 aaPredicted RBP22.85■■□□□ 1.25
RNF40-203ENST00000493683 ATP2B3Q16720 1220 aa22.85■■□□□ 1.25
RNF40-203ENST00000493683 MEIS3Q99687 375 aa22.85■■□□□ 1.25
RNF40-203ENST00000493683 PPP1R2P41236 205 aa22.84■■□□□ 1.25
RNF40-203ENST00000493683 PUF60Q9UHX1 559 aaKnown RBP22.84■■□□□ 1.25
RNF40-203ENST00000493683 ATP5J2-PTCD1G3V325 749 aa22.84■■□□□ 1.25
RNF40-203ENST00000493683 GRM8O00222 908 aa22.83■■□□□ 1.25
RNF40-203ENST00000493683 KSR2Q6VAB6 950 aa22.83■■□□□ 1.25
RNF40-203ENST00000493683 BICD1Q96G01 975 aa22.83■■□□□ 1.25
RNF40-203ENST00000493683 TRERF1Q96PN7 1200 aa22.83■■□□□ 1.25
RNF40-203ENST00000493683 ASIC1P78348 528 aa22.83■■□□□ 1.25
RNF40-203ENST00000493683 MSL1Q68DK7 614 aa22.83■■□□□ 1.25
RNF40-203ENST00000493683 C6orf50Q9HD87 102 aa22.83■■□□□ 1.25
RNF40-203ENST00000493683 PCDHB15Q9Y5E8 787 aa22.83■■□□□ 1.25
RNF40-203ENST00000493683 CCDC6Q16204 474 aa22.83■■□□□ 1.24
RNF40-203ENST00000493683 SLC4A4Q9Y6R1 1079 aa22.83■■□□□ 1.24
RNF40-203ENST00000493683 POLR3AO14802 1390 aaPredicted RBP22.83■■□□□ 1.24
RNF40-203ENST00000493683 TSHZ3Q63HK5 1081 aa22.82■■□□□ 1.24
RNF40-203ENST00000493683 CCDC42Q96M95 316 aa22.82■■□□□ 1.24
RNF40-203ENST00000493683 DNM1Q05193 864 aaKnown RBP22.82■■□□□ 1.24
RNF40-203ENST00000493683 MCM6Q14566 821 aa22.82■■□□□ 1.24
RNF40-203ENST00000493683 PUS7Q96PZ0 661 aaKnown RBP22.82■■□□□ 1.24
RNF40-203ENST00000493683 IDI1Q13907 227 aa22.82■■□□□ 1.24
RNF40-203ENST00000493683 TSGA10Q9BZW7 698 aa22.82■■□□□ 1.24
RNF40-203ENST00000493683 CYP7A1P22680 504 aa22.81■■□□□ 1.24
RNF40-203ENST00000493683 TUBB2AQ13885 445 aa22.81■■□□□ 1.24
RNF40-203ENST00000493683 TUBB2BQ9BVA1 445 aa22.81■■□□□ 1.24
RNF40-203ENST00000493683 STX8Q9UNK0 236 aa22.81■■□□□ 1.24
RNF40-203ENST00000493683 RSPH14Q9UHP6 348 aa22.81■■□□□ 1.24
RNF40-203ENST00000493683 DMRT2Q9Y5R5 561 aa22.81■■□□□ 1.24
RNF40-203ENST00000493683 EBAG9O00559 213 aa22.81■■□□□ 1.24
RNF40-203ENST00000493683 NBPF11Q86T75 865 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms