RNA–Protein interactions for RNA: ENST00000492470.1

CNIH3-210, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 3

Gene CNIH3, Length 823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-210ENST00000492470 MKRN3Q13064 507 aaKnown RBP13.24□□□□□ -0.29
CNIH3-210ENST00000492470 SCARF1Q14162 830 aa13.24□□□□□ -0.29
CNIH3-210ENST00000492470 TAF7Q15545 349 aaPredicted RBP13.24□□□□□ -0.29
CNIH3-210ENST00000492470 R3HDMLQ9H3Y0 253 aa13.24□□□□□ -0.29
CNIH3-210ENST00000492470 KCNQ5Q9NR82 932 aa13.24□□□□□ -0.29
CNIH3-210ENST00000492470 MIS18AQ9NYP9 233 aa13.24□□□□□ -0.29
CNIH3-210ENST00000492470 TIMELESSQ9UNS1 1208 aa13.24□□□□□ -0.29
CNIH3-210ENST00000492470 CUL9Q8IWT3 2517 aa13.24□□□□□ -0.29
CNIH3-210ENST00000492470 ZNF609O15014 1411 aa13.23□□□□□ -0.29
CNIH3-210ENST00000492470 PITPNM2Q9BZ72 1349 aa13.23□□□□□ -0.29
CNIH3-210ENST00000492470 A0A0C4DFX4 3053 aa13.23□□□□□ -0.29
CNIH3-210ENST00000492470 C6orf229H3BNL8 230 aa13.23□□□□□ -0.29
CNIH3-210ENST00000492470 EN2P19622 333 aaPredicted RBP13.23□□□□□ -0.29
CNIH3-210ENST00000492470 DOK7Q18PE1 504 aa13.23□□□□□ -0.29
CNIH3-210ENST00000492470 OTOP1Q7RTM1 612 aa13.23□□□□□ -0.29
CNIH3-210ENST00000492470 NSFL1CQ9UNZ2 370 aaKnown RBP13.23□□□□□ -0.29
CNIH3-210ENST00000492470 ERBB4Q15303 1308 aa13.22□□□□□ -0.29
CNIH3-210ENST00000492470 HTATSF1O43719 755 aaKnown RBP13.22□□□□□ -0.29
CNIH3-210ENST00000492470 VIL1P09327 827 aaKnown RBP13.22□□□□□ -0.29
CNIH3-210ENST00000492470 ZNF280AP59817 542 aaPredicted RBP13.22□□□□□ -0.29
CNIH3-210ENST00000492470 TTLL12Q14166 644 aaPredicted RBP13.22□□□□□ -0.29
CNIH3-210ENST00000492470 SLC17A8Q8NDX2 589 aa13.22□□□□□ -0.29
CNIH3-210ENST00000492470 EYA3Q99504 573 aa13.22□□□□□ -0.29
CNIH3-210ENST00000492470 ALDH1A1P00352 501 aa13.21□□□□□ -0.29
CNIH3-210ENST00000492470 ARMC5Q96C12 935 aa13.21□□□□□ -0.29
CNIH3-210ENST00000492470 POLLQ9UGP5 575 aa13.21□□□□□ -0.29
CNIH3-210ENST00000492470 PSME4Q14997 1843 aa13.2□□□□□ -0.3
CNIH3-210ENST00000492470 SH3TC1Q8TE82 1336 aa13.2□□□□□ -0.3
CNIH3-210ENST00000492470 TCIRG1Q13488 830 aa13.2□□□□□ -0.3
CNIH3-210ENST00000492470 PNISRQ8TF01 805 aaKnown RBP13.2□□□□□ -0.3
CNIH3-210ENST00000492470 RANBP2P49792 3224 aaKnown RBP13.2□□□□□ -0.3
CNIH3-210ENST00000492470 EIF4A1P60842 406 aaKnown RBP13.19□□□□□ -0.3
CNIH3-210ENST00000492470 GPSM2P81274 684 aa13.19□□□□□ -0.3
CNIH3-210ENST00000492470 RSBN1LQ6PCB5 846 aaPredicted RBP13.19□□□□□ -0.3
CNIH3-210ENST00000492470 NLRP10Q86W26 655 aa13.19□□□□□ -0.3
CNIH3-210ENST00000492470 AGBL3Q8NEM8 1001 aa13.19□□□□□ -0.3
CNIH3-210ENST00000492470 OTUD5Q96G74 571 aa13.19□□□□□ -0.3
CNIH3-210ENST00000492470 MYOZ2Q9NPC6 264 aa13.19□□□□□ -0.3
CNIH3-210ENST00000492470 TRMT112Q9UI30 125 aaKnown RBP13.19□□□□□ -0.3
CNIH3-210ENST00000492470 SCAF8Q9UPN6 1271 aaKnown RBP13.19□□□□□ -0.3
CNIH3-210ENST00000492470 PTPN22Q9Y2R2 807 aa13.19□□□□□ -0.3
CNIH3-210ENST00000492470 COL6A3P12111 3177 aa13.19□□□□□ -0.3
CNIH3-210ENST00000492470 COL4A1P02462 1669 aa13.18□□□□□ -0.3
CNIH3-210ENST00000492470 H0YGN5 161 aa13.18□□□□□ -0.3
CNIH3-210ENST00000492470 PER1O15534 1290 aaPredicted RBP13.18□□□□□ -0.3
CNIH3-210ENST00000492470 NF2P35240 595 aa13.18□□□□□ -0.3
CNIH3-210ENST00000492470 HSP90AB3PQ58FF7 597 aa13.18□□□□□ -0.3
CNIH3-210ENST00000492470 PRAMEF18Q5VWM3 479 aa13.18□□□□□ -0.3
CNIH3-210ENST00000492470 TBC1D16Q8TBP0 767 aa13.18□□□□□ -0.3
CNIH3-210ENST00000492470 NECTIN2Q92692 538 aa13.18□□□□□ -0.3
CNIH3-210ENST00000492470 ERO1AQ96HE7 468 aa13.18□□□□□ -0.3
CNIH3-210ENST00000492470 CFAP53Q96M91 514 aa13.18□□□□□ -0.3
CNIH3-210ENST00000492470 TMEM106CQ9BVX2 250 aa13.18□□□□□ -0.3
CNIH3-210ENST00000492470 LAMB1P07942 1786 aa13.17□□□□□ -0.3
CNIH3-210ENST00000492470 G3V3G9 751 aa13.17□□□□□ -0.3
CNIH3-210ENST00000492470 USP17L8P0C7I0 530 aa13.17□□□□□ -0.3
CNIH3-210ENST00000492470 DCAF8Q5TAQ9 597 aa13.17□□□□□ -0.3
CNIH3-210ENST00000492470 CHRDL2Q6WN34 429 aa13.17□□□□□ -0.3
CNIH3-210ENST00000492470 LRP10Q7Z4F1 713 aa13.17□□□□□ -0.3
CNIH3-210ENST00000492470 CELF1Q92879 486 aaKnown RBP13.17□□□□□ -0.3
CNIH3-210ENST00000492470 THUMPD2Q9BTF0 503 aaKnown RBP13.17□□□□□ -0.3
CNIH3-210ENST00000492470 ZC3H12CQ9C0D7 883 aaKnown RBP13.17□□□□□ -0.3
CNIH3-210ENST00000492470 NUDCQ9Y266 331 aa13.17□□□□□ -0.3
CNIH3-210ENST00000492470 DLG5Q8TDM6 1919 aa13.16□□□□□ -0.3
CNIH3-210ENST00000492470 U2AF1L5P0DN76 240 aaPredicted RBP13.16□□□□□ -0.3
CNIH3-210ENST00000492470 U2AF1Q01081 240 aaKnown RBP eCLIP13.16□□□□□ -0.3
CNIH3-210ENST00000492470 PTPN12Q05209 780 aaKnown RBP13.16□□□□□ -0.3
CNIH3-210ENST00000492470 CNGB1Q14028 1251 aaPredicted RBP13.16□□□□□ -0.3
CNIH3-210ENST00000492470 SPRYD7Q5W111 196 aa13.16□□□□□ -0.3
CNIH3-210ENST00000492470 CD99L2Q8TCZ2 262 aa13.16□□□□□ -0.3
CNIH3-210ENST00000492470 MANSC4A6NHS7 340 aaPredicted RBP13.15□□□□□ -0.3
CNIH3-210ENST00000492470 ARMC9Q7Z3E5 817 aa13.15□□□□□ -0.3
CNIH3-210ENST00000492470 IFNL1Q8IU54 200 aa13.15□□□□□ -0.3
CNIH3-210ENST00000492470 ZNF333Q96JL9 665 aa13.15□□□□□ -0.3
CNIH3-210ENST00000492470 GMLQ99445 158 aa13.15□□□□□ -0.3
CNIH3-210ENST00000492470 EFCC1Q9HA90 598 aa13.15□□□□□ -0.3
CNIH3-210ENST00000492470 UFL1O94874 794 aa13.14□□□□□ -0.31
CNIH3-210ENST00000492470 INHBEP58166 350 aa13.14□□□□□ -0.31
CNIH3-210ENST00000492470 PDIA6Q15084 440 aa13.14□□□□□ -0.31
CNIH3-210ENST00000492470 PROSER3Q2NL68 480 aa13.14□□□□□ -0.31
CNIH3-210ENST00000492470 NBPF9Q3BBW0 867 aa13.14□□□□□ -0.31
CNIH3-210ENST00000492470 PRKG1Q13976 671 aa13.13□□□□□ -0.31
CNIH3-210ENST00000492470 SF3B3Q15393 1217 aaKnown RBP13.13□□□□□ -0.31
CNIH3-210ENST00000492470 PODXL2Q9NZ53 605 aa13.13□□□□□ -0.31
CNIH3-210ENST00000492470 RBM27Q9P2N5 1060 aaKnown RBP13.13□□□□□ -0.31
CNIH3-210ENST00000492470 IGF2BP3O00425 579 aaKnown RBP eCLIP13.12□□□□□ -0.31
CNIH3-210ENST00000492470 ANXA1P04083 346 aa13.12□□□□□ -0.31
CNIH3-210ENST00000492470 SLC4A8Q2Y0W8 1093 aa13.12□□□□□ -0.31
CNIH3-210ENST00000492470 SLC9C1Q4G0N8 1177 aa13.12□□□□□ -0.31
CNIH3-210ENST00000492470 LDLRAD1Q5T700 205 aa13.12□□□□□ -0.31
CNIH3-210ENST00000492470 ZNF428Q96B54 188 aa13.12□□□□□ -0.31
CNIH3-210ENST00000492470 ANKIB1Q9P2G1 1089 aa13.12□□□□□ -0.31
CNIH3-210ENST00000492470 GGA1Q9UJY5 639 aa13.12□□□□□ -0.31
CNIH3-210ENST00000492470 USP17L3A6NCW0 530 aa13.11□□□□□ -0.31
CNIH3-210ENST00000492470 USP17L4A6NCW7 530 aa13.11□□□□□ -0.31
CNIH3-210ENST00000492470 ZBTB48P10074 688 aaPredicted RBP13.11□□□□□ -0.31
CNIH3-210ENST00000492470 EIF2S2P20042 333 aaKnown RBP13.11□□□□□ -0.31
CNIH3-210ENST00000492470 MNX1P50219 401 aaPredicted RBP13.11□□□□□ -0.31
CNIH3-210ENST00000492470 AIMP1Q12904 312 aaKnown RBP13.11□□□□□ -0.31
CNIH3-210ENST00000492470 CRHR2Q13324 411 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms