RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 PTPN12Q05209 780 aaKnown RBP17.87■□□□□ 0.45
TNFRSF1B-203ENST00000492361 IQSEC3Q9UPP2 1182 aaPredicted RBP17.87■□□□□ 0.45
TNFRSF1B-203ENST00000492361 ARID5BQ14865 1188 aa17.86■□□□□ 0.45
TNFRSF1B-203ENST00000492361 FAM200AQ8TCP9 573 aa17.86■□□□□ 0.45
TNFRSF1B-203ENST00000492361 KIF3AQ9Y496 699 aa17.86■□□□□ 0.45
TNFRSF1B-203ENST00000492361 SPATA31D1Q6ZQQ2 1576 aa17.86■□□□□ 0.45
TNFRSF1B-203ENST00000492361 TMX1Q9H3N1 280 aa17.86■□□□□ 0.45
TNFRSF1B-203ENST00000492361 CNNM1Q9NRU3 951 aa17.86■□□□□ 0.45
TNFRSF1B-203ENST00000492361 TCHHQ07283 1943 aa17.86■□□□□ 0.45
TNFRSF1B-203ENST00000492361 PHKG2P15735 406 aa17.86■□□□□ 0.45
TNFRSF1B-203ENST00000492361 ZHX1Q9UKY1 873 aaPredicted RBP17.86■□□□□ 0.45
TNFRSF1B-203ENST00000492361 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.86■□□□□ 0.45
TNFRSF1B-203ENST00000492361 ANKRD26Q9UPS8 1709 aa17.86■□□□□ 0.45
TNFRSF1B-203ENST00000492361 HS1BP3Q53T59 392 aa17.85■□□□□ 0.45
TNFRSF1B-203ENST00000492361 TECPR2O15040 1411 aa17.85■□□□□ 0.45
TNFRSF1B-203ENST00000492361 HOXB7P09629 217 aa17.85■□□□□ 0.45
TNFRSF1B-203ENST00000492361 SCRN1Q12765 414 aa17.85■□□□□ 0.45
TNFRSF1B-203ENST00000492361 SYNE3Q6ZMZ3 975 aa17.85■□□□□ 0.45
TNFRSF1B-203ENST00000492361 PIBF1Q8WXW3 757 aa17.85■□□□□ 0.45
TNFRSF1B-203ENST00000492361 SSH2Q76I76 1423 aa17.85■□□□□ 0.45
TNFRSF1B-203ENST00000492361 A0A1B0GUL7 405 aa17.85■□□□□ 0.45
TNFRSF1B-203ENST00000492361 CYP27B1O15528 508 aa17.85■□□□□ 0.45
TNFRSF1B-203ENST00000492361 BABAM1Q9NWV8 329 aa17.85■□□□□ 0.45
TNFRSF1B-203ENST00000492361 U3KPZ7 1027 aaPredicted RBP17.85■□□□□ 0.45
TNFRSF1B-203ENST00000492361 PEAK1Q9H792 1746 aa17.85■□□□□ 0.45
TNFRSF1B-203ENST00000492361 GOLGA8BA8MQT2 603 aa17.84■□□□□ 0.45
TNFRSF1B-203ENST00000492361 ADORA1P30542 326 aa17.84■□□□□ 0.45
TNFRSF1B-203ENST00000492361 CWC25Q9NXE8 425 aaPredicted RBP17.84■□□□□ 0.45
TNFRSF1B-203ENST00000492361 KRT32Q14532 448 aa17.84■□□□□ 0.45
TNFRSF1B-203ENST00000492361 CCDC158Q5M9N0 1113 aa17.84■□□□□ 0.45
TNFRSF1B-203ENST00000492361 SNAP23O00161 211 aa17.84■□□□□ 0.45
TNFRSF1B-203ENST00000492361 PDIA6Q15084 440 aa17.84■□□□□ 0.45
TNFRSF1B-203ENST00000492361 PPP4R3BQ5MIZ7 849 aa17.84■□□□□ 0.45
TNFRSF1B-203ENST00000492361 MTMR7Q9Y216 660 aa17.84■□□□□ 0.45
TNFRSF1B-203ENST00000492361 METTL24Q5JXM2 366 aa17.83■□□□□ 0.45
TNFRSF1B-203ENST00000492361 MICU3Q86XE3 530 aa17.83■□□□□ 0.45
TNFRSF1B-203ENST00000492361 MRVI1Q9Y6F6 885 aa17.83■□□□□ 0.45
TNFRSF1B-203ENST00000492361 KLF18A0A0U1RQI7 1052 aa17.83■□□□□ 0.44
TNFRSF1B-203ENST00000492361 NAA30Q147X3 362 aaPredicted RBP17.83■□□□□ 0.44
TNFRSF1B-203ENST00000492361 USP28Q96RU2 1077 aa17.83■□□□□ 0.44
TNFRSF1B-203ENST00000492361 MYL10Q9BUA6 226 aa17.83■□□□□ 0.44
TNFRSF1B-203ENST00000492361 PKNOX2Q96KN3 472 aa17.83■□□□□ 0.44
TNFRSF1B-203ENST00000492361 CFAP45Q9UL16 551 aa17.83■□□□□ 0.44
TNFRSF1B-203ENST00000492361 ERBB3P21860 1342 aa17.82■□□□□ 0.44
TNFRSF1B-203ENST00000492361 RIOK3O14730 519 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1B-203ENST00000492361 TNNT1P13805 278 aa17.82■□□□□ 0.44
TNFRSF1B-203ENST00000492361 TRDNQ13061 729 aa17.82■□□□□ 0.44
TNFRSF1B-203ENST00000492361 UVSSAQ2YD98 709 aa17.82■□□□□ 0.44
TNFRSF1B-203ENST00000492361 PGBD1Q96JS3 809 aa17.82■□□□□ 0.44
TNFRSF1B-203ENST00000492361 ITSN1Q15811 1721 aa17.82■□□□□ 0.44
TNFRSF1B-203ENST00000492361 SLC4A8Q2Y0W8 1093 aa17.82■□□□□ 0.44
TNFRSF1B-203ENST00000492361 AOPEPQ8N6M6 819 aa17.81■□□□□ 0.44
TNFRSF1B-203ENST00000492361 STOX1Q6ZVD7 989 aa17.81■□□□□ 0.44
TNFRSF1B-203ENST00000492361 ORC3Q9UBD5 711 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF1B-203ENST00000492361 PXDNQ92626 1479 aa17.81■□□□□ 0.44
TNFRSF1B-203ENST00000492361 DIP2BQ9P265 1576 aa17.81■□□□□ 0.44
TNFRSF1B-203ENST00000492361 MCM5P33992 734 aa17.81■□□□□ 0.44
TNFRSF1B-203ENST00000492361 C8orf76Q96K31 380 aa17.81■□□□□ 0.44
TNFRSF1B-203ENST00000492361 TM6SF1Q9BZW5 370 aa17.81■□□□□ 0.44
TNFRSF1B-203ENST00000492361 GTF3C6Q969F1 213 aa17.8■□□□□ 0.44
TNFRSF1B-203ENST00000492361 TBC1D2BQ9UPU7 963 aa17.8■□□□□ 0.44
TNFRSF1B-203ENST00000492361 SPECC1Q5M775 1068 aa17.8■□□□□ 0.44
TNFRSF1B-203ENST00000492361 LDHAL6AQ6ZMR3 332 aa17.8■□□□□ 0.44
TNFRSF1B-203ENST00000492361 DHX32Q7L7V1 743 aaKnown RBP17.8■□□□□ 0.44
TNFRSF1B-203ENST00000492361 INCENPQ9NQS7 918 aa17.8■□□□□ 0.44
TNFRSF1B-203ENST00000492361 RIMBP3CA6NJZ7 1639 aa17.79■□□□□ 0.44
TNFRSF1B-203ENST00000492361 RIMBP3BA6NNM3 1639 aa17.79■□□□□ 0.44
TNFRSF1B-203ENST00000492361 RIMBP3Q9UFD9 1639 aa17.79■□□□□ 0.44
TNFRSF1B-203ENST00000492361 ATP5JP18859 108 aa17.79■□□□□ 0.44
TNFRSF1B-203ENST00000492361 HOMER1Q86YM7 354 aa17.79■□□□□ 0.44
TNFRSF1B-203ENST00000492361 CEMIPQ8WUJ3 1361 aa17.79■□□□□ 0.44
TNFRSF1B-203ENST00000492361 C11orf57Q6ZUT1 292 aaPredicted RBP17.79■□□□□ 0.44
TNFRSF1B-203ENST00000492361 KBTBD3Q8NAB2 608 aa17.79■□□□□ 0.44
TNFRSF1B-203ENST00000492361 AIFM3Q96NN9 605 aa17.79■□□□□ 0.44
TNFRSF1B-203ENST00000492361 DDX19AQ9NUU7 478 aaKnown RBP17.79■□□□□ 0.44
TNFRSF1B-203ENST00000492361 HMG20BQ9P0W2 317 aa17.79■□□□□ 0.44
TNFRSF1B-203ENST00000492361 DYNC1I1O14576 645 aa17.79■□□□□ 0.44
TNFRSF1B-203ENST00000492361 ZKSCAN3Q9BRR0 538 aa17.79■□□□□ 0.44
TNFRSF1B-203ENST00000492361 DIP2AQ14689 1571 aa17.78■□□□□ 0.44
TNFRSF1B-203ENST00000492361 E7EWF7 191 aa17.78■□□□□ 0.44
TNFRSF1B-203ENST00000492361 ZAP70P43403 619 aa17.78■□□□□ 0.44
TNFRSF1B-203ENST00000492361 MTX1Q13505 466 aa17.78■□□□□ 0.44
TNFRSF1B-203ENST00000492361 PDCL2Q8N4E4 241 aa17.78■□□□□ 0.44
TNFRSF1B-203ENST00000492361 NUP133Q8WUM0 1156 aa17.78■□□□□ 0.44
TNFRSF1B-203ENST00000492361 DCAF5Q96JK2 942 aa17.78■□□□□ 0.44
TNFRSF1B-203ENST00000492361 KCNF1Q9H3M0 494 aa17.78■□□□□ 0.44
TNFRSF1B-203ENST00000492361 HSPD1P10809 573 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1B-203ENST00000492361 LMOD1P29536 600 aaPredicted RBP17.78■□□□□ 0.44
TNFRSF1B-203ENST00000492361 HMGN5P82970 282 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1B-203ENST00000492361 ZCRB1Q8TBF4 217 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1B-203ENST00000492361 PHKBQ93100 1093 aa17.78■□□□□ 0.44
TNFRSF1B-203ENST00000492361 NRXN3Q9Y4C0 1643 aa17.77■□□□□ 0.44
TNFRSF1B-203ENST00000492361 IFIT5Q13325 482 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1B-203ENST00000492361 IMMTQ16891 758 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1B-203ENST00000492361 CCAR2Q8N163 923 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1B-203ENST00000492361 CMTR1Q8N1G2 835 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1B-203ENST00000492361 PDILTQ8N807 584 aa17.77■□□□□ 0.44
TNFRSF1B-203ENST00000492361 C19orf44Q9H6X5 657 aa17.77■□□□□ 0.44
TNFRSF1B-203ENST00000492361 PRC1O43663 620 aa17.77■□□□□ 0.43
TNFRSF1B-203ENST00000492361 ZNF396Q96N95 335 aaPredicted RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms