RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 RTF1Q92541 710 aaKnown RBP15.58■□□□□ 0.08
CACNA1C-228ENST00000492150 CFAP53Q96M91 514 aa15.58■□□□□ 0.08
CACNA1C-228ENST00000492150 LRRC37AA6NMS7 1700 aa15.57■□□□□ 0.08
CACNA1C-228ENST00000492150 SLC9C1Q4G0N8 1177 aa15.57■□□□□ 0.08
CACNA1C-228ENST00000492150 CD99L2Q8TCZ2 262 aa15.57■□□□□ 0.08
CACNA1C-228ENST00000492150 NECTIN2Q92692 538 aa15.57■□□□□ 0.08
CACNA1C-228ENST00000492150 NUDCQ9Y266 331 aa15.57■□□□□ 0.08
CACNA1C-228ENST00000492150 NR2E3Q9Y5X4 410 aa15.57■□□□□ 0.08
CACNA1C-228ENST00000492150 ANKRD36CQ5JPF3 1778 aa15.57■□□□□ 0.08
CACNA1C-228ENST00000492150 HTATSF1O43719 755 aaKnown RBP15.56■□□□□ 0.08
CACNA1C-228ENST00000492150 U2AF1L5P0DN76 240 aaPredicted RBP15.56■□□□□ 0.08
CACNA1C-228ENST00000492150 U2AF1Q01081 240 aaKnown RBP eCLIP15.56■□□□□ 0.08
CACNA1C-228ENST00000492150 ANGEL2Q5VTE6 544 aaKnown RBP15.56■□□□□ 0.08
CACNA1C-228ENST00000492150 IFNL1Q8IU54 200 aa15.56■□□□□ 0.08
CACNA1C-228ENST00000492150 HTATIP2Q9BUP3 242 aa15.56■□□□□ 0.08
CACNA1C-228ENST00000492150 MIS18AQ9NYP9 233 aa15.56■□□□□ 0.08
CACNA1C-228ENST00000492150 ASTN2O75129 1339 aaPredicted RBP15.56■□□□□ 0.08
CACNA1C-228ENST00000492150 TAF1P21675 1872 aa15.56■□□□□ 0.08
CACNA1C-228ENST00000492150 ABCC4O15439 1325 aa15.55■□□□□ 0.08
CACNA1C-228ENST00000492150 MANSC4A6NHS7 340 aaPredicted RBP15.55■□□□□ 0.08
CACNA1C-228ENST00000492150 ZBTB7BO15156 539 aaPredicted RBP15.55■□□□□ 0.08
CACNA1C-228ENST00000492150 BBOX1O75936 387 aa15.55■□□□□ 0.08
CACNA1C-228ENST00000492150 PLA2G5P39877 138 aa15.55■□□□□ 0.08
CACNA1C-228ENST00000492150 TCIRG1Q13488 830 aa15.55■□□□□ 0.08
CACNA1C-228ENST00000492150 TAF7Q15545 349 aaPredicted RBP15.55■□□□□ 0.08
CACNA1C-228ENST00000492150 MTMR10Q9NXD2 777 aa15.55■□□□□ 0.08
CACNA1C-228ENST00000492150 MKRN3Q13064 507 aaKnown RBP15.54■□□□□ 0.08
CACNA1C-228ENST00000492150 SPRYD7Q5W111 196 aa15.54■□□□□ 0.08
CACNA1C-228ENST00000492150 UBE2Q1Q7Z7E8 422 aa15.54■□□□□ 0.08
CACNA1C-228ENST00000492150 WTIPA6NIX2 430 aaPredicted RBP15.53■□□□□ 0.08
CACNA1C-228ENST00000492150 ERVV-1B6SEH8 477 aa15.53■□□□□ 0.08
CACNA1C-228ENST00000492150 PPP2R1AP30153 589 aa15.53■□□□□ 0.08
CACNA1C-228ENST00000492150 SCN9AQ15858 1988 aa15.53■□□□□ 0.08
CACNA1C-228ENST00000492150 PSME4Q14997 1843 aa15.52■□□□□ 0.08
CACNA1C-228ENST00000492150 LAMB2P55268 1798 aa15.52■□□□□ 0.08
CACNA1C-228ENST00000492150 RTL9Q8NET4 1388 aa15.52■□□□□ 0.08
CACNA1C-228ENST00000492150 ZNF280AP59817 542 aaPredicted RBP15.52■□□□□ 0.08
CACNA1C-228ENST00000492150 SP3Q02447 781 aa15.52■□□□□ 0.08
CACNA1C-228ENST00000492150 ARHGEF6Q15052 776 aa15.52■□□□□ 0.08
CACNA1C-228ENST00000492150 TTLL7Q6ZT98 887 aa15.52■□□□□ 0.08
CACNA1C-228ENST00000492150 C3orf67Q6ZVT6 689 aa15.52■□□□□ 0.08
CACNA1C-228ENST00000492150 NGEFQ8N5V2 710 aa15.52■□□□□ 0.08
CACNA1C-228ENST00000492150 SHISA4Q96DD7 197 aa15.52■□□□□ 0.08
CACNA1C-228ENST00000492150 NLRP3Q96P20 1036 aa15.52■□□□□ 0.08
CACNA1C-228ENST00000492150 MAP3K15Q6ZN16 1313 aa15.51■□□□□ 0.07
CACNA1C-228ENST00000492150 UBN2Q6ZU65 1347 aa15.51■□□□□ 0.07
CACNA1C-228ENST00000492150 CAP1Q01518 475 aa15.51■□□□□ 0.07
CACNA1C-228ENST00000492150 SCARF1Q14162 830 aa15.51■□□□□ 0.07
CACNA1C-228ENST00000492150 PTCH2Q9Y6C5 1203 aa15.51■□□□□ 0.07
CACNA1C-228ENST00000492150 IGF2BP3O00425 579 aaKnown RBP eCLIP15.5■□□□□ 0.07
CACNA1C-228ENST00000492150 NTSR2O95665 410 aa15.5■□□□□ 0.07
CACNA1C-228ENST00000492150 VIL1P09327 827 aaKnown RBP15.5■□□□□ 0.07
CACNA1C-228ENST00000492150 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
CACNA1C-228ENST00000492150 NF2P35240 595 aa15.5■□□□□ 0.07
CACNA1C-228ENST00000492150 TTLL12Q14166 644 aaPredicted RBP15.5■□□□□ 0.07
CACNA1C-228ENST00000492150 Q7L0L9 218 aa15.5■□□□□ 0.07
CACNA1C-228ENST00000492150 DBNDD1Q9H9R9 158 aa15.5■□□□□ 0.07
CACNA1C-228ENST00000492150 RRP7AQ9Y3A4 280 aaKnown RBP15.5■□□□□ 0.07
CACNA1C-228ENST00000492150 TTC28Q96AY4 2481 aa15.49■□□□□ 0.07
CACNA1C-228ENST00000492150 ZBTB48P10074 688 aaPredicted RBP15.49■□□□□ 0.07
CACNA1C-228ENST00000492150 GPTP24298 496 aa15.49■□□□□ 0.07
CACNA1C-228ENST00000492150 BMP8BP34820 402 aa15.49■□□□□ 0.07
CACNA1C-228ENST00000492150 EIF4A1P60842 406 aaKnown RBP15.49■□□□□ 0.07
CACNA1C-228ENST00000492150 PTPN12Q05209 780 aaKnown RBP15.49■□□□□ 0.07
CACNA1C-228ENST00000492150 WASHC4Q2M389 1173 aa15.49■□□□□ 0.07
CACNA1C-228ENST00000492150 LRIT3Q3SXY7 679 aa15.49■□□□□ 0.07
CACNA1C-228ENST00000492150 LDLRAD1Q5T700 205 aa15.49■□□□□ 0.07
CACNA1C-228ENST00000492150 SUSD4Q5VX71 490 aa15.49■□□□□ 0.07
CACNA1C-228ENST00000492150 TMC4Q7Z404 712 aa15.49■□□□□ 0.07
CACNA1C-228ENST00000492150 NKX2-3Q8TAU0 364 aa15.49■□□□□ 0.07
CACNA1C-228ENST00000492150 CRHR2Q13324 411 aa15.48■□□□□ 0.07
CACNA1C-228ENST00000492150 KIF6Q6ZMV9 814 aa15.48■□□□□ 0.07
CACNA1C-228ENST00000492150 ARMC9Q7Z3E5 817 aa15.48■□□□□ 0.07
CACNA1C-228ENST00000492150 ZNF34Q8IZ26 560 aa15.48■□□□□ 0.07
CACNA1C-228ENST00000492150 ZBTB3Q9H5J0 574 aa15.48■□□□□ 0.07
CACNA1C-228ENST00000492150 MUC3AQ02505 3323 aa15.48■□□□□ 0.07
CACNA1C-228ENST00000492150 ECE2O60344 883 aa15.47■□□□□ 0.07
CACNA1C-228ENST00000492150 MYL6BP14649 208 aa15.47■□□□□ 0.07
CACNA1C-228ENST00000492150 SLC10A5Q5PT55 438 aa15.47■□□□□ 0.07
CACNA1C-228ENST00000492150 OTUD7BQ6GQQ9 843 aa15.47■□□□□ 0.07
CACNA1C-228ENST00000492150 PNISRQ8TF01 805 aaKnown RBP15.47■□□□□ 0.07
CACNA1C-228ENST00000492150 FAM122AQ96E09 287 aa15.47■□□□□ 0.07
CACNA1C-228ENST00000492150 AGBL3Q8NEM8 1001 aa15.46■□□□□ 0.07
CACNA1C-228ENST00000492150 RPTORQ8N122 1335 aa15.45■□□□□ 0.06
CACNA1C-228ENST00000492150 GRAPQ13588 217 aa15.45■□□□□ 0.06
CACNA1C-228ENST00000492150 GIGYF2Q6Y7W6 1299 aaKnown RBP15.45■□□□□ 0.06
CACNA1C-228ENST00000492150 PPP1R42Q7Z4L9 355 aa15.45■□□□□ 0.06
CACNA1C-228ENST00000492150 GRAPLQ8TC17 118 aaPredicted RBP15.45■□□□□ 0.06
CACNA1C-228ENST00000492150 THUMPD2Q9BTF0 503 aaKnown RBP15.45■□□□□ 0.06
CACNA1C-228ENST00000492150 KCNQ5Q9NR82 932 aa15.45■□□□□ 0.06
CACNA1C-228ENST00000492150 STAP2Q9UGK3 403 aa15.45■□□□□ 0.06
CACNA1C-228ENST00000492150 SSC5DA1L4H1 1573 aa15.45■□□□□ 0.06
CACNA1C-228ENST00000492150 GJA8P48165 433 aa15.44■□□□□ 0.06
CACNA1C-228ENST00000492150 PLEKHF1Q96S99 279 aa15.44■□□□□ 0.06
CACNA1C-228ENST00000492150 GDF15Q99988 308 aa15.44■□□□□ 0.06
CACNA1C-228ENST00000492150 MYOZ2Q9NPC6 264 aa15.44■□□□□ 0.06
CACNA1C-228ENST00000492150 DLG5Q8TDM6 1919 aa15.44■□□□□ 0.06
CACNA1C-228ENST00000492150 PARP10Q53GL7 1025 aa15.43■□□□□ 0.06
CACNA1C-228ENST00000492150 PRAMEF18Q5VWM3 479 aa15.43■□□□□ 0.06
CACNA1C-228ENST00000492150 LRP10Q7Z4F1 713 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms