RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 NFE2L2Q16236 605 aa14.64□□□□□ -0.07
CLCNKA-206ENST00000491433 TBC1D10BQ4KMP7 808 aaPredicted RBP14.64□□□□□ -0.07
CLCNKA-206ENST00000491433 SAMD7Q7Z3H4 446 aa14.64□□□□□ -0.07
CLCNKA-206ENST00000491433 NLRP10Q86W26 655 aa14.64□□□□□ -0.07
CLCNKA-206ENST00000491433 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.64□□□□□ -0.07
CLCNKA-206ENST00000491433 TMEM106CQ9BVX2 250 aa14.64□□□□□ -0.07
CLCNKA-206ENST00000491433 BABAM1Q9NWV8 329 aa14.64□□□□□ -0.07
CLCNKA-206ENST00000491433 STXBP5LQ9Y2K9 1186 aa14.64□□□□□ -0.07
CLCNKA-206ENST00000491433 HTTP42858 3142 aa14.64□□□□□ -0.07
CLCNKA-206ENST00000491433 HCLS1P14317 486 aaPredicted RBP14.63□□□□□ -0.07
CLCNKA-206ENST00000491433 FKBP1BP68106 108 aa14.63□□□□□ -0.07
CLCNKA-206ENST00000491433 TSPYL4Q9UJ04 414 aa14.63□□□□□ -0.07
CLCNKA-206ENST00000491433 ZBTB12Q9Y330 459 aaPredicted RBP14.63□□□□□ -0.07
CLCNKA-206ENST00000491433 MAPK8IP3Q9UPT6 1336 aa14.63□□□□□ -0.07
CLCNKA-206ENST00000491433 EIF2S2P20042 333 aaKnown RBP14.62□□□□□ -0.07
CLCNKA-206ENST00000491433 PLA2G5P39877 138 aa14.62□□□□□ -0.07
CLCNKA-206ENST00000491433 TCIRG1Q13488 830 aa14.62□□□□□ -0.07
CLCNKA-206ENST00000491433 KIF4BQ2VIQ3 1234 aa14.62□□□□□ -0.07
CLCNKA-206ENST00000491433 LRP10Q7Z4F1 713 aa14.62□□□□□ -0.07
CLCNKA-206ENST00000491433 DBNDD1Q9H9R9 158 aa14.62□□□□□ -0.07
CLCNKA-206ENST00000491433 DUOX1Q9NRD9 1551 aa14.62□□□□□ -0.07
CLCNKA-206ENST00000491433 NSFL1CQ9UNZ2 370 aaKnown RBP14.62□□□□□ -0.07
CLCNKA-206ENST00000491433 TRIM17Q9Y577 477 aa14.62□□□□□ -0.07
CLCNKA-206ENST00000491433 A0A1W2PPC1 479 aa14.61□□□□□ -0.07
CLCNKA-206ENST00000491433 SHTN1A0MZ66 631 aa14.61□□□□□ -0.07
CLCNKA-206ENST00000491433 C6orf229H3BNL8 230 aa14.61□□□□□ -0.07
CLCNKA-206ENST00000491433 ECE2O60344 883 aa14.61□□□□□ -0.07
CLCNKA-206ENST00000491433 PDIA6Q15084 440 aa14.61□□□□□ -0.07
CLCNKA-206ENST00000491433 RBM26Q5T8P6 1007 aaKnown RBP14.61□□□□□ -0.07
CLCNKA-206ENST00000491433 RASAL3Q86YV0 1011 aa14.61□□□□□ -0.07
CLCNKA-206ENST00000491433 NECTIN2Q92692 538 aa14.61□□□□□ -0.07
CLCNKA-206ENST00000491433 THUMPD2Q9BTF0 503 aaKnown RBP14.61□□□□□ -0.07
CLCNKA-206ENST00000491433 ADM5C9JUS6 153 aa14.6□□□□□ -0.07
CLCNKA-206ENST00000491433 G3V3G9 751 aa14.6□□□□□ -0.07
CLCNKA-206ENST00000491433 DCAF8Q5TAQ9 597 aa14.6□□□□□ -0.07
CLCNKA-206ENST00000491433 COPS6Q7L5N1 327 aa14.6□□□□□ -0.07
CLCNKA-206ENST00000491433 ARMC5Q96C12 935 aa14.6□□□□□ -0.07
CLCNKA-206ENST00000491433 FAM122AQ96E09 287 aa14.6□□□□□ -0.07
CLCNKA-206ENST00000491433 TAF1P21675 1872 aa14.6□□□□□ -0.07
CLCNKA-206ENST00000491433 CENPFP49454 3210 aa14.59□□□□□ -0.07
CLCNKA-206ENST00000491433 RIMBP2O15034 1052 aa14.59□□□□□ -0.07
CLCNKA-206ENST00000491433 AIMP1Q12904 312 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-206ENST00000491433 SF3B3Q15393 1217 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-206ENST00000491433 DLK2Q6UY11 383 aa14.59□□□□□ -0.07
CLCNKA-206ENST00000491433 LRCH3Q96II8 777 aa14.59□□□□□ -0.07
CLCNKA-206ENST00000491433 PLEKHF1Q96S99 279 aa14.59□□□□□ -0.07
CLCNKA-206ENST00000491433 ZC3H12CQ9C0D7 883 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-206ENST00000491433 PRO3102Q9H379 93 aa14.59□□□□□ -0.07
CLCNKA-206ENST00000491433 GGA3Q9NZ52 723 aa14.59□□□□□ -0.07
CLCNKA-206ENST00000491433 SOX1O00570 391 aaPredicted RBP14.58□□□□□ -0.08
CLCNKA-206ENST00000491433 VIL1P09327 827 aaKnown RBP14.58□□□□□ -0.08
CLCNKA-206ENST00000491433 HSP90B1P14625 803 aaKnown RBP14.58□□□□□ -0.08
CLCNKA-206ENST00000491433 LMOD3Q0VAK6 560 aa14.58□□□□□ -0.08
CLCNKA-206ENST00000491433 XAGE3Q8WTP9 111 aa14.58□□□□□ -0.08
CLCNKA-206ENST00000491433 CDCA5Q96FF9 252 aa14.58□□□□□ -0.08
CLCNKA-206ENST00000491433 ZNF609O15014 1411 aa14.58□□□□□ -0.08
CLCNKA-206ENST00000491433 VCANP13611 3396 aa14.57□□□□□ -0.08
CLCNKA-206ENST00000491433 LAMA3Q16787 3333 aa14.57□□□□□ -0.08
CLCNKA-206ENST00000491433 GPR153Q6NV75 609 aa14.57□□□□□ -0.08
CLCNKA-206ENST00000491433 OTOP1Q7RTM1 612 aa14.57□□□□□ -0.08
CLCNKA-206ENST00000491433 DEFB123Q8N688 67 aa14.57□□□□□ -0.08
CLCNKA-206ENST00000491433 AGBL3Q8NEM8 1001 aa14.57□□□□□ -0.08
CLCNKA-206ENST00000491433 DPF3Q92784 378 aa14.57□□□□□ -0.08
CLCNKA-206ENST00000491433 POLLQ9UGP5 575 aa14.57□□□□□ -0.08
CLCNKA-206ENST00000491433 EGFRP00533 1210 aa14.56□□□□□ -0.08
CLCNKA-206ENST00000491433 DOK7Q18PE1 504 aa14.56□□□□□ -0.08
CLCNKA-206ENST00000491433 PROSER3Q2NL68 480 aa14.56□□□□□ -0.08
CLCNKA-206ENST00000491433 CELF1Q92879 486 aaKnown RBP14.56□□□□□ -0.08
CLCNKA-206ENST00000491433 CFHR5Q9BXR6 569 aa14.56□□□□□ -0.08
CLCNKA-206ENST00000491433 RTL9Q8NET4 1388 aa14.56□□□□□ -0.08
CLCNKA-206ENST00000491433 ANXA1P04083 346 aa14.55□□□□□ -0.08
CLCNKA-206ENST00000491433 RPS8P62241 208 aaKnown RBP14.55□□□□□ -0.08
CLCNKA-206ENST00000491433 GPSM2P81274 684 aa14.55□□□□□ -0.08
CLCNKA-206ENST00000491433 ANGEL2Q5VTE6 544 aaKnown RBP14.55□□□□□ -0.08
CLCNKA-206ENST00000491433 PLBD2Q8NHP8 589 aa14.55□□□□□ -0.08
CLCNKA-206ENST00000491433 TBC1D16Q8TBP0 767 aa14.55□□□□□ -0.08
CLCNKA-206ENST00000491433 PODXL2Q9NZ53 605 aa14.55□□□□□ -0.08
CLCNKA-206ENST00000491433 PTPN22Q9Y2R2 807 aa14.55□□□□□ -0.08
CLCNKA-206ENST00000491433 NF2P35240 595 aa14.54□□□□□ -0.08
CLCNKA-206ENST00000491433 TM4SF4P48230 202 aa14.54□□□□□ -0.08
CLCNKA-206ENST00000491433 ZNF280AP59817 542 aaPredicted RBP14.54□□□□□ -0.08
CLCNKA-206ENST00000491433 SREBF2Q12772 1141 aa14.54□□□□□ -0.08
CLCNKA-206ENST00000491433 SCARF1Q14162 830 aa14.54□□□□□ -0.08
CLCNKA-206ENST00000491433 RSBN1LQ6PCB5 846 aaPredicted RBP14.54□□□□□ -0.08
CLCNKA-206ENST00000491433 PSME4Q14997 1843 aa14.54□□□□□ -0.08
CLCNKA-206ENST00000491433 HOXD11P31277 338 aaPredicted RBP14.53□□□□□ -0.08
CLCNKA-206ENST00000491433 RIPK4P57078 832 aa14.53□□□□□ -0.08
CLCNKA-206ENST00000491433 SLC4A8Q2Y0W8 1093 aa14.53□□□□□ -0.08
CLCNKA-206ENST00000491433 FAM89AQ96GI7 184 aa14.53□□□□□ -0.08
CLCNKA-206ENST00000491433 ISCA1Q9BUE6 129 aa14.53□□□□□ -0.08
CLCNKA-206ENST00000491433 KCNQ5Q9NR82 932 aa14.53□□□□□ -0.08
CLCNKA-206ENST00000491433 ANKIB1Q9P2G1 1089 aa14.53□□□□□ -0.08
CLCNKA-206ENST00000491433 GGA1Q9UJY5 639 aa14.53□□□□□ -0.08
CLCNKA-206ENST00000491433 SCN9AQ15858 1988 aa14.53□□□□□ -0.08
CLCNKA-206ENST00000491433 USP17L8P0C7I0 530 aa14.52□□□□□ -0.09
CLCNKA-206ENST00000491433 MMP14P50281 582 aa14.52□□□□□ -0.09
CLCNKA-206ENST00000491433 MYOZ2Q9NPC6 264 aa14.52□□□□□ -0.09
CLCNKA-206ENST00000491433 IRS4O14654 1257 aaPredicted RBP14.51□□□□□ -0.09
CLCNKA-206ENST00000491433 UFL1O94874 794 aa14.51□□□□□ -0.09
CLCNKA-206ENST00000491433 HOXB7P09629 217 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms