RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 TNNI3KQ59H18 835 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 ZNF790Q6PG37 636 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 FPGT-TNNI3KV9GXZ4 949 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 ITSN1Q15811 1721 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 USP27XA6NNY8 438 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 SMC2O95347 1197 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 HOXB7P09629 217 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 SKILP12757 684 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 GTF3C6Q969F1 213 aa13.1□□□□□ -0.31
VPS72-205ENST00000491094 PTPDC1A2A3K4 754 aa13.09□□□□□ -0.31
VPS72-205ENST00000491094 PTPN21Q16825 1174 aa13.09□□□□□ -0.31
VPS72-205ENST00000491094 AOPEPQ8N6M6 819 aa13.09□□□□□ -0.31
VPS72-205ENST00000491094 NRXN3Q9Y4C0 1643 aa13.09□□□□□ -0.31
VPS72-205ENST00000491094 ZNF771Q7L3S4 317 aaPredicted RBP13.09□□□□□ -0.31
VPS72-205ENST00000491094 KCNH5Q8NCM2 988 aa13.09□□□□□ -0.31
VPS72-205ENST00000491094 PRDM4Q9UKN5 801 aa13.09□□□□□ -0.31
VPS72-205ENST00000491094 MCMDC2Q4G0Z9 681 aa13.09□□□□□ -0.31
VPS72-205ENST00000491094 SMAP1Q8IYB5 467 aaPredicted RBP13.09□□□□□ -0.31
VPS72-205ENST00000491094 ZBTB9Q96C00 473 aa13.09□□□□□ -0.31
VPS72-205ENST00000491094 IL17RAQ96F46 866 aa13.09□□□□□ -0.31
VPS72-205ENST00000491094 KRT32Q14532 448 aa13.08□□□□□ -0.32
VPS72-205ENST00000491094 HSP90AA4PQ58FG1 418 aa13.08□□□□□ -0.32
VPS72-205ENST00000491094 ZBTB3Q9H5J0 574 aa13.08□□□□□ -0.32
VPS72-205ENST00000491094 MON2Q7Z3U7 1717 aa13.08□□□□□ -0.32
VPS72-205ENST00000491094 CEMIPQ8WUJ3 1361 aa13.08□□□□□ -0.32
VPS72-205ENST00000491094 USP42Q9H9J4 1324 aaKnown RBP13.08□□□□□ -0.32
VPS72-205ENST00000491094 RESTQ13127 1097 aa13.08□□□□□ -0.32
VPS72-205ENST00000491094 CEP135Q66GS9 1140 aa13.08□□□□□ -0.32
VPS72-205ENST00000491094 STOX1Q6ZVD7 989 aa13.08□□□□□ -0.32
VPS72-205ENST00000491094 PTPN14Q15678 1187 aa13.07□□□□□ -0.32
VPS72-205ENST00000491094 GOLPH3LQ9H4A5 285 aa13.07□□□□□ -0.32
VPS72-205ENST00000491094 HMG20BQ9P0W2 317 aa13.07□□□□□ -0.32
VPS72-205ENST00000491094 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
VPS72-205ENST00000491094 PTPN12Q05209 780 aaKnown RBP13.07□□□□□ -0.32
VPS72-205ENST00000491094 STK38Q15208 465 aa13.07□□□□□ -0.32
VPS72-205ENST00000491094 CCDC69A6NI79 296 aa13.07□□□□□ -0.32
VPS72-205ENST00000491094 FAM177A1Q8N128 213 aaPredicted RBP13.07□□□□□ -0.32
VPS72-205ENST00000491094 RXRAP19793 462 aa13.06□□□□□ -0.32
VPS72-205ENST00000491094 PDIA6Q15084 440 aa13.06□□□□□ -0.32
VPS72-205ENST00000491094 CPLX1O14810 134 aa13.06□□□□□ -0.32
VPS72-205ENST00000491094 ZSCAN20P17040 1043 aaPredicted RBP13.06□□□□□ -0.32
VPS72-205ENST00000491094 METTL22Q9BUU2 404 aaPredicted RBP13.06□□□□□ -0.32
VPS72-205ENST00000491094 NCBP1Q09161 790 aaKnown RBP13.05□□□□□ -0.32
VPS72-205ENST00000491094 TMX1Q9H3N1 280 aa13.05□□□□□ -0.32
VPS72-205ENST00000491094 ELP1O95163 1332 aa13.05□□□□□ -0.32
VPS72-205ENST00000491094 MARCKSP29966 332 aaPredicted RBP13.05□□□□□ -0.32
VPS72-205ENST00000491094 DHX32Q7L7V1 743 aaKnown RBP13.05□□□□□ -0.32
VPS72-205ENST00000491094 IFIT1P09914 478 aaKnown RBP13.05□□□□□ -0.32
VPS72-205ENST00000491094 ATP5JP18859 108 aa13.05□□□□□ -0.32
VPS72-205ENST00000491094 GNL2Q13823 731 aaKnown RBP13.05□□□□□ -0.32
VPS72-205ENST00000491094 HOMER1Q86YM7 354 aa13.05□□□□□ -0.32
VPS72-205ENST00000491094 KCNB2Q92953 911 aa13.05□□□□□ -0.32
VPS72-205ENST00000491094 APPP05067 770 aa13.05□□□□□ -0.32
VPS72-205ENST00000491094 NSUN7Q8NE18 718 aaKnown RBP13.05□□□□□ -0.32
VPS72-205ENST00000491094 TDRD7Q8NHU6 1098 aaKnown RBP13.05□□□□□ -0.32
VPS72-205ENST00000491094 TATP17735 454 aaPredicted RBP13.04□□□□□ -0.32
VPS72-205ENST00000491094 TRHP20396 242 aaPredicted RBP13.04□□□□□ -0.32
VPS72-205ENST00000491094 STX1AQ16623 288 aa13.04□□□□□ -0.32
VPS72-205ENST00000491094 LRRC8AQ8IWT6 810 aa13.04□□□□□ -0.32
VPS72-205ENST00000491094 ZSCAN16Q9H4T2 348 aaPredicted RBP13.04□□□□□ -0.32
VPS72-205ENST00000491094 ZNF215Q9UL58 517 aaPredicted RBP13.04□□□□□ -0.32
VPS72-205ENST00000491094 COL15A1P39059 1388 aa13.04□□□□□ -0.32
VPS72-205ENST00000491094 GTF2F1P35269 517 aaKnown RBP eCLIP13.04□□□□□ -0.32
VPS72-205ENST00000491094 CABP4P57796 275 aa13.04□□□□□ -0.32
VPS72-205ENST00000491094 LRRC24Q50LG9 513 aa13.04□□□□□ -0.32
VPS72-205ENST00000491094 KRT28Q7Z3Y7 464 aa13.04□□□□□ -0.32
VPS72-205ENST00000491094 TMC6Q7Z403 805 aa13.04□□□□□ -0.32
VPS72-205ENST00000491094 ARHGEF25Q86VW2 580 aa13.04□□□□□ -0.32
VPS72-205ENST00000491094 PLA2G4DQ86XP0 818 aa13.04□□□□□ -0.32
VPS72-205ENST00000491094 ZNF396Q96N95 335 aaPredicted RBP13.04□□□□□ -0.32
VPS72-205ENST00000491094 PAG1Q9NWQ8 432 aa13.04□□□□□ -0.32
VPS72-205ENST00000491094 LMOD1P29536 600 aaPredicted RBP13.04□□□□□ -0.32
VPS72-205ENST00000491094 CEP57L1Q8IYX8 460 aa13.04□□□□□ -0.32
VPS72-205ENST00000491094 TAF7LQ5H9L4 462 aa13.03□□□□□ -0.32
VPS72-205ENST00000491094 A0A0G2JS52 829 aa13.03□□□□□ -0.32
VPS72-205ENST00000491094 SYNE3Q6ZMZ3 975 aa13.03□□□□□ -0.32
VPS72-205ENST00000491094 PUS3Q9BZE2 481 aaKnown RBP13.03□□□□□ -0.32
VPS72-205ENST00000491094 ANO10Q9NW15 660 aa13.03□□□□□ -0.32
VPS72-205ENST00000491094 SMTNL1A8MU46 457 aa13.03□□□□□ -0.32
VPS72-205ENST00000491094 ATP2B1P20020 1258 aa13.03□□□□□ -0.32
VPS72-205ENST00000491094 E7EWF7 191 aa13.02□□□□□ -0.32
VPS72-205ENST00000491094 CTDNEP1O95476 244 aa13.02□□□□□ -0.32
VPS72-205ENST00000491094 KBTBD3Q8NAB2 608 aa13.02□□□□□ -0.32
VPS72-205ENST00000491094 IFNKQ9P0W0 207 aa13.02□□□□□ -0.32
VPS72-205ENST00000491094 A0A0U1RQG5 324 aaPredicted RBP13.02□□□□□ -0.32
VPS72-205ENST00000491094 TTLL7Q6ZT98 887 aa13.02□□□□□ -0.32
VPS72-205ENST00000491094 A1BGP04217 495 aa13.02□□□□□ -0.33
VPS72-205ENST00000491094 ANKLE2Q86XL3 938 aa13.02□□□□□ -0.33
VPS72-205ENST00000491094 CCDC82Q8N4S0 544 aa13.02□□□□□ -0.33
VPS72-205ENST00000491094 C8orf76Q96K31 380 aa13.02□□□□□ -0.33
VPS72-205ENST00000491094 SLC52A2Q9HAB3 445 aa13.02□□□□□ -0.33
VPS72-205ENST00000491094 PCDHA7Q9UN72 937 aa13.02□□□□□ -0.33
VPS72-205ENST00000491094 CLIC4Q9Y696 253 aa13.02□□□□□ -0.33
VPS72-205ENST00000491094 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.33
VPS72-205ENST00000491094 NPHP4O75161 1426 aaPredicted RBP13.02□□□□□ -0.33
VPS72-205ENST00000491094 SNRPA1P09661 255 aaKnown RBP13.02□□□□□ -0.33
VPS72-205ENST00000491094 IQCB1Q15051 598 aa13.02□□□□□ -0.33
VPS72-205ENST00000491094 ELF2Q15723 593 aa13.02□□□□□ -0.33
VPS72-205ENST00000491094 ORC3Q9UBD5 711 aaPredicted RBP13.02□□□□□ -0.33
VPS72-205ENST00000491094 AKAP12Q02952 1782 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms