RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 PDE8BO95263 885 aa16.2■□□□□ 0.18
HLA-DOA-205ENST00000490305 RPS8P62241 208 aaKnown RBP16.2■□□□□ 0.18
HLA-DOA-205ENST00000490305 CRY2Q49AN0 593 aa16.2■□□□□ 0.18
HLA-DOA-205ENST00000490305 CCDC24Q8N4L8 307 aa16.2■□□□□ 0.18
HLA-DOA-205ENST00000490305 RPGRQ92834 1020 aaKnown RBP16.2■□□□□ 0.18
HLA-DOA-205ENST00000490305 UPF1Q92900 1129 aaKnown RBP eCLIP16.2■□□□□ 0.18
HLA-DOA-205ENST00000490305 NEUROD6Q96NK8 337 aa16.2■□□□□ 0.18
HLA-DOA-205ENST00000490305 BRIP1Q9BX63 1249 aa16.2■□□□□ 0.18
HLA-DOA-205ENST00000490305 TSHZ2Q9NRE2 1034 aa16.2■□□□□ 0.18
HLA-DOA-205ENST00000490305 AK9Q5TCS8 1911 aa16.19■□□□□ 0.18
HLA-DOA-205ENST00000490305 A0A1B0GUL7 405 aa16.19■□□□□ 0.18
HLA-DOA-205ENST00000490305 CDC45O75419 566 aa16.19■□□□□ 0.18
HLA-DOA-205ENST00000490305 SDSP20132 328 aa16.19■□□□□ 0.18
HLA-DOA-205ENST00000490305 ATP2B3Q16720 1220 aa16.19■□□□□ 0.18
HLA-DOA-205ENST00000490305 VGLL2Q8N8G2 317 aa16.19■□□□□ 0.18
HLA-DOA-205ENST00000490305 RBM17Q96I25 401 aaKnown RBP16.19■□□□□ 0.18
HLA-DOA-205ENST00000490305 DBNLQ9UJU6 430 aaKnown RBP16.19■□□□□ 0.18
HLA-DOA-205ENST00000490305 TAF1P21675 1872 aa16.18■□□□□ 0.18
HLA-DOA-205ENST00000490305 KLRG2A4D1S0 409 aaPredicted RBP16.18■□□□□ 0.18
HLA-DOA-205ENST00000490305 ATP5JP18859 108 aa16.18■□□□□ 0.18
HLA-DOA-205ENST00000490305 PDE6BP35913 854 aa16.18■□□□□ 0.18
HLA-DOA-205ENST00000490305 TIMM10P62072 90 aa16.18■□□□□ 0.18
HLA-DOA-205ENST00000490305 GRAPQ13588 217 aa16.18■□□□□ 0.18
HLA-DOA-205ENST00000490305 PUM3Q15397 648 aaKnown RBP16.18■□□□□ 0.18
HLA-DOA-205ENST00000490305 TSHZ3Q63HK5 1081 aa16.18■□□□□ 0.18
HLA-DOA-205ENST00000490305 MSL1Q68DK7 614 aa16.18■□□□□ 0.18
HLA-DOA-205ENST00000490305 CASC1Q6TDU7 716 aa16.18■□□□□ 0.18
HLA-DOA-205ENST00000490305 GRAPLQ8TC17 118 aaPredicted RBP16.18■□□□□ 0.18
HLA-DOA-205ENST00000490305 DBNDD2Q9BQY9 259 aa16.18■□□□□ 0.18
HLA-DOA-205ENST00000490305 TLR7Q9NYK1 1049 aaKnown RBP16.18■□□□□ 0.18
HLA-DOA-205ENST00000490305 ANKRD31Q8N7Z5 1873 aa16.18■□□□□ 0.18
HLA-DOA-205ENST00000490305 TRIM6-TRIM34B2RNG4 842 aa16.17■□□□□ 0.18
HLA-DOA-205ENST00000490305 CCDC158Q5M9N0 1113 aa16.17■□□□□ 0.18
HLA-DOA-205ENST00000490305 CNTROBQ8N137 903 aa16.17■□□□□ 0.18
HLA-DOA-205ENST00000490305 CELF1Q92879 486 aaKnown RBP16.17■□□□□ 0.18
HLA-DOA-205ENST00000490305 ANKRD2Q9GZV1 360 aa16.17■□□□□ 0.18
HLA-DOA-205ENST00000490305 ARAP2Q8WZ64 1704 aa16.16■□□□□ 0.18
HLA-DOA-205ENST00000490305 A0A1B0GUL6 1792 aa16.16■□□□□ 0.18
HLA-DOA-205ENST00000490305 SLC5A1P13866 664 aa16.16■□□□□ 0.18
HLA-DOA-205ENST00000490305 HOXA10P31260 410 aaPredicted RBP16.16■□□□□ 0.18
HLA-DOA-205ENST00000490305 CHRNDQ07001 517 aa16.16■□□□□ 0.18
HLA-DOA-205ENST00000490305 GORABQ5T7V8 394 aa16.16■□□□□ 0.18
HLA-DOA-205ENST00000490305 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.16■□□□□ 0.18
HLA-DOA-205ENST00000490305 LPIN2Q92539 896 aa16.16■□□□□ 0.18
HLA-DOA-205ENST00000490305 RILPL2Q969X0 211 aa16.16■□□□□ 0.18
HLA-DOA-205ENST00000490305 CRAMP1Q96RY5 1269 aa16.16■□□□□ 0.18
HLA-DOA-205ENST00000490305 IFIT1P09914 478 aaKnown RBP16.15■□□□□ 0.18
HLA-DOA-205ENST00000490305 FGFR2P21802 821 aa16.15■□□□□ 0.18
HLA-DOA-205ENST00000490305 TMC4Q7Z404 712 aa16.15■□□□□ 0.18
HLA-DOA-205ENST00000490305 EVI5LQ96CN4 794 aa16.15■□□□□ 0.18
HLA-DOA-205ENST00000490305 XAGE2Q96GT9 111 aa16.15■□□□□ 0.18
HLA-DOA-205ENST00000490305 MINPP1Q9UNW1 487 aa16.15■□□□□ 0.18
HLA-DOA-205ENST00000490305 BBOX1O75936 387 aa16.14■□□□□ 0.17
HLA-DOA-205ENST00000490305 NPR1P16066 1061 aa16.14■□□□□ 0.17
HLA-DOA-205ENST00000490305 BOLA2Q9H3K6 86 aa16.14■□□□□ 0.17
HLA-DOA-205ENST00000490305 UPF2Q9HAU5 1272 aaKnown RBP16.14■□□□□ 0.17
HLA-DOA-205ENST00000490305 UBE4AQ14139 1066 aa16.13■□□□□ 0.17
HLA-DOA-205ENST00000490305 TTC39AQ5SRH9 613 aa16.13■□□□□ 0.17
HLA-DOA-205ENST00000490305 TBC1D9Q6ZT07 1266 aa16.13■□□□□ 0.17
HLA-DOA-205ENST00000490305 HELBQ8NG08 1087 aaPredicted RBP16.13■□□□□ 0.17
HLA-DOA-205ENST00000490305 ZNF512BQ96KM6 892 aaPredicted RBP16.13■□□□□ 0.17
HLA-DOA-205ENST00000490305 HAUS7Q99871 368 aa16.13■□□□□ 0.17
HLA-DOA-205ENST00000490305 COL4A1P02462 1669 aa16.13■□□□□ 0.17
HLA-DOA-205ENST00000490305 TAF5LO75529 589 aa16.12■□□□□ 0.17
HLA-DOA-205ENST00000490305 UQCRFS1P1P0C7P4 283 aa16.12■□□□□ 0.17
HLA-DOA-205ENST00000490305 SRGNP10124 158 aa16.12■□□□□ 0.17
HLA-DOA-205ENST00000490305 ADORA1P30542 326 aa16.12■□□□□ 0.17
HLA-DOA-205ENST00000490305 TICAM2Q86XR7 235 aa16.12■□□□□ 0.17
HLA-DOA-205ENST00000490305 MASTLQ96GX5 879 aa16.12■□□□□ 0.17
HLA-DOA-205ENST00000490305 HIP1O00291 1037 aa16.11■□□□□ 0.17
HLA-DOA-205ENST00000490305 MAP4K4O95819 1239 aaPredicted RBP16.11■□□□□ 0.17
HLA-DOA-205ENST00000490305 ALDH1B1P30837 517 aa16.11■□□□□ 0.17
HLA-DOA-205ENST00000490305 H0YIN7 160 aa16.1■□□□□ 0.17
HLA-DOA-205ENST00000490305 KCNJ4P48050 445 aa16.1■□□□□ 0.17
HLA-DOA-205ENST00000490305 STYK1Q6J9G0 422 aa16.1■□□□□ 0.17
HLA-DOA-205ENST00000490305 PDGFDQ9GZP0 370 aaPredicted RBP16.1■□□□□ 0.17
HLA-DOA-205ENST00000490305 LEMD3Q9Y2U8 911 aa16.1■□□□□ 0.17
HLA-DOA-205ENST00000490305 RFX7Q2KHR2 1363 aa16.1■□□□□ 0.17
HLA-DOA-205ENST00000490305 COL11A2P13942 1736 aaPredicted RBP16.09■□□□□ 0.17
HLA-DOA-205ENST00000490305 CHMLP26374 656 aa16.09■□□□□ 0.17
HLA-DOA-205ENST00000490305 CCDC102BQ68D86 513 aa16.09■□□□□ 0.17
HLA-DOA-205ENST00000490305 C2CD5Q86YS7 1000 aa16.09■□□□□ 0.17
HLA-DOA-205ENST00000490305 MTFR1LQ9H019 292 aa16.09■□□□□ 0.17
HLA-DOA-205ENST00000490305 RBM19Q9Y4C8 960 aaKnown RBP16.09■□□□□ 0.17
HLA-DOA-205ENST00000490305 XDHP47989 1333 aa16.09■□□□□ 0.17
HLA-DOA-205ENST00000490305 PPEF1O14829 653 aaPredicted RBP16.08■□□□□ 0.16
HLA-DOA-205ENST00000490305 SEC24BO95487 1268 aa16.08■□□□□ 0.16
HLA-DOA-205ENST00000490305 POLD1P28340 1107 aa16.08■□□□□ 0.16
HLA-DOA-205ENST00000490305 ARID4AP29374 1257 aaPredicted RBP16.08■□□□□ 0.16
HLA-DOA-205ENST00000490305 CAVIN4Q5BKX8 364 aa16.08■□□□□ 0.16
HLA-DOA-205ENST00000490305 SP8Q8IXZ3 490 aa16.08■□□□□ 0.16
HLA-DOA-205ENST00000490305 RUFY2Q8WXA3 655 aa16.08■□□□□ 0.16
HLA-DOA-205ENST00000490305 DNAJC2Q99543 621 aaKnown RBP16.08■□□□□ 0.16
HLA-DOA-205ENST00000490305 FSD1Q9BTV5 496 aa16.08■□□□□ 0.16
HLA-DOA-205ENST00000490305 TMX4Q9H1E5 349 aaPredicted RBP16.08■□□□□ 0.16
HLA-DOA-205ENST00000490305 GNL3LQ9NVN8 582 aaKnown RBP16.08■□□□□ 0.16
HLA-DOA-205ENST00000490305 PAG1Q9NWQ8 432 aa16.08■□□□□ 0.16
HLA-DOA-205ENST00000490305 LRRC37AA6NMS7 1700 aa16.08■□□□□ 0.16
HLA-DOA-205ENST00000490305 ATP2B4P23634 1241 aa16.07■□□□□ 0.16
HLA-DOA-205ENST00000490305 MFAP1P55081 439 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms