RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 EAF2Q96CJ1 260 aaPredicted RBP17.39■□□□□ 0.37
VPS26A-205ENST00000489656 CDC5LQ99459 802 aaKnown RBP17.39■□□□□ 0.37
VPS26A-205ENST00000489656 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.39■□□□□ 0.37
VPS26A-205ENST00000489656 FPGT-TNNI3KV9GXZ4 949 aa17.39■□□□□ 0.37
VPS26A-205ENST00000489656 KIF13BQ9NQT8 1826 aa17.39■□□□□ 0.37
VPS26A-205ENST00000489656 DLEC1Q9Y238 1755 aa17.38■□□□□ 0.37
VPS26A-205ENST00000489656 CACNA1SQ13698 1873 aa17.38■□□□□ 0.37
VPS26A-205ENST00000489656 IFIT2P09913 472 aaKnown RBP17.38■□□□□ 0.37
VPS26A-205ENST00000489656 AACSQ86V21 672 aa17.38■□□□□ 0.37
VPS26A-205ENST00000489656 SEC31BQ9NQW1 1179 aa17.38■□□□□ 0.37
VPS26A-205ENST00000489656 CEP126Q9P2H0 1117 aa17.38■□□□□ 0.37
VPS26A-205ENST00000489656 AKAP11Q9UKA4 1901 aa17.37■□□□□ 0.37
VPS26A-205ENST00000489656 NPHP1O15259 732 aa17.37■□□□□ 0.37
VPS26A-205ENST00000489656 GSPT1P15170 499 aaKnown RBP17.37■□□□□ 0.37
VPS26A-205ENST00000489656 IGHMBP2P38935 993 aaKnown RBP17.37■□□□□ 0.37
VPS26A-205ENST00000489656 C8orf34Q49A92 452 aa17.37■□□□□ 0.37
VPS26A-205ENST00000489656 UPF1Q92900 1129 aaKnown RBP eCLIP17.37■□□□□ 0.37
VPS26A-205ENST00000489656 GPATCH3Q96I76 525 aa17.37■□□□□ 0.37
VPS26A-205ENST00000489656 BACH2Q9BYV9 841 aa17.37■□□□□ 0.37
VPS26A-205ENST00000489656 MROH5Q6ZUA9 1318 aa17.37■□□□□ 0.37
VPS26A-205ENST00000489656 MYH7P12883 1935 aa17.37■□□□□ 0.37
VPS26A-205ENST00000489656 KLRG2A4D1S0 409 aaPredicted RBP17.36■□□□□ 0.37
VPS26A-205ENST00000489656 CRY2Q49AN0 593 aa17.36■□□□□ 0.37
VPS26A-205ENST00000489656 VGLL2Q8N8G2 317 aa17.36■□□□□ 0.37
VPS26A-205ENST00000489656 PI4K2BQ8TCG2 481 aa17.36■□□□□ 0.37
VPS26A-205ENST00000489656 SLC16A10Q8TF71 515 aa17.36■□□□□ 0.37
VPS26A-205ENST00000489656 CNNM1Q9NRU3 951 aa17.36■□□□□ 0.37
VPS26A-205ENST00000489656 AKAP2Q9Y2D5 859 aa17.36■□□□□ 0.37
VPS26A-205ENST00000489656 MYH13Q9UKX3 1938 aa17.36■□□□□ 0.37
VPS26A-205ENST00000489656 MMP10P09238 476 aa17.35■□□□□ 0.37
VPS26A-205ENST00000489656 ANKRD18AQ8IVF6 992 aa17.35■□□□□ 0.37
VPS26A-205ENST00000489656 MPHOSPH8Q99549 860 aa17.35■□□□□ 0.37
VPS26A-205ENST00000489656 ECHDC1Q9NTX5 307 aa17.35■□□□□ 0.37
VPS26A-205ENST00000489656 PARP3Q9Y6F1 533 aa17.35■□□□□ 0.37
VPS26A-205ENST00000489656 ERC2O15083 957 aa17.34■□□□□ 0.37
VPS26A-205ENST00000489656 GLRX3O76003 335 aaKnown RBP17.34■□□□□ 0.37
VPS26A-205ENST00000489656 METTL24Q5JXM2 366 aa17.34■□□□□ 0.37
VPS26A-205ENST00000489656 CCDC24Q8N4L8 307 aa17.34■□□□□ 0.37
VPS26A-205ENST00000489656 CCDC8Q9H0W5 538 aaPredicted RBP17.34■□□□□ 0.37
VPS26A-205ENST00000489656 BSDC1Q9NW68 430 aaPredicted RBP17.34■□□□□ 0.37
VPS26A-205ENST00000489656 DBNLQ9UJU6 430 aaKnown RBP17.34■□□□□ 0.37
VPS26A-205ENST00000489656 PDE8BO95263 885 aa17.33■□□□□ 0.36
VPS26A-205ENST00000489656 DDX46Q7L014 1031 aaKnown RBP17.33■□□□□ 0.36
VPS26A-205ENST00000489656 BRIP1Q9BX63 1249 aa17.33■□□□□ 0.36
VPS26A-205ENST00000489656 BCL11AQ9H165 835 aa17.33■□□□□ 0.36
VPS26A-205ENST00000489656 TLR7Q9NYK1 1049 aaKnown RBP17.33■□□□□ 0.36
VPS26A-205ENST00000489656 A0A1B0GUL7 405 aa17.32■□□□□ 0.36
VPS26A-205ENST00000489656 HOXA10P31260 410 aaPredicted RBP17.32■□□□□ 0.36
VPS26A-205ENST00000489656 RPS8P62241 208 aaKnown RBP17.32■□□□□ 0.36
VPS26A-205ENST00000489656 CELF1Q92879 486 aaKnown RBP17.32■□□□□ 0.36
VPS26A-205ENST00000489656 LTBP1Q14766 1721 aa17.32■□□□□ 0.36
VPS26A-205ENST00000489656 SDSP20132 328 aa17.31■□□□□ 0.36
VPS26A-205ENST00000489656 FGFR2P21802 821 aa17.31■□□□□ 0.36
VPS26A-205ENST00000489656 GRAPQ13588 217 aa17.31■□□□□ 0.36
VPS26A-205ENST00000489656 ATP2B3Q16720 1220 aa17.31■□□□□ 0.36
VPS26A-205ENST00000489656 TSHZ3Q63HK5 1081 aa17.31■□□□□ 0.36
VPS26A-205ENST00000489656 MSL1Q68DK7 614 aa17.31■□□□□ 0.36
VPS26A-205ENST00000489656 GRAPLQ8TC17 118 aaPredicted RBP17.31■□□□□ 0.36
VPS26A-205ENST00000489656 DBNDD2Q9BQY9 259 aa17.31■□□□□ 0.36
VPS26A-205ENST00000489656 TSHZ2Q9NRE2 1034 aa17.31■□□□□ 0.36
VPS26A-205ENST00000489656 ATP5JP18859 108 aa17.3■□□□□ 0.36
VPS26A-205ENST00000489656 PUM3Q15397 648 aaKnown RBP17.3■□□□□ 0.36
VPS26A-205ENST00000489656 RPGRQ92834 1020 aaKnown RBP17.3■□□□□ 0.36
VPS26A-205ENST00000489656 CRAMP1Q96RY5 1269 aa17.3■□□□□ 0.36
VPS26A-205ENST00000489656 MYO5AQ9Y4I1 1855 aaKnown RBP17.3■□□□□ 0.36
VPS26A-205ENST00000489656 DOCK2Q92608 1830 aa17.3■□□□□ 0.36
VPS26A-205ENST00000489656 CDC45O75419 566 aa17.29■□□□□ 0.36
VPS26A-205ENST00000489656 PDE6BP35913 854 aa17.29■□□□□ 0.36
VPS26A-205ENST00000489656 TIMM10P62072 90 aa17.29■□□□□ 0.36
VPS26A-205ENST00000489656 CHRNDQ07001 517 aa17.29■□□□□ 0.36
VPS26A-205ENST00000489656 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.29■□□□□ 0.36
VPS26A-205ENST00000489656 RBM17Q96I25 401 aaKnown RBP17.29■□□□□ 0.36
VPS26A-205ENST00000489656 KIAA1551Q9HCM1 1747 aa17.29■□□□□ 0.36
VPS26A-205ENST00000489656 LPIN2Q92539 896 aa17.28■□□□□ 0.36
VPS26A-205ENST00000489656 XAGE2Q96GT9 111 aa17.28■□□□□ 0.36
VPS26A-205ENST00000489656 NEUROD6Q96NK8 337 aa17.28■□□□□ 0.36
VPS26A-205ENST00000489656 PDGFDQ9GZP0 370 aaPredicted RBP17.28■□□□□ 0.36
VPS26A-205ENST00000489656 MINPP1Q9UNW1 487 aa17.28■□□□□ 0.36
VPS26A-205ENST00000489656 C10orf71Q711Q0 1435 aa17.28■□□□□ 0.36
VPS26A-205ENST00000489656 TMC4Q7Z404 712 aa17.27■□□□□ 0.36
VPS26A-205ENST00000489656 ZNF512BQ96KM6 892 aaPredicted RBP17.27■□□□□ 0.36
VPS26A-205ENST00000489656 ANKRD2Q9GZV1 360 aa17.27■□□□□ 0.36
VPS26A-205ENST00000489656 BRCA1P38398 1863 aaKnown RBP17.27■□□□□ 0.35
VPS26A-205ENST00000489656 EIF5BO60841 1220 aaKnown RBP17.26■□□□□ 0.35
VPS26A-205ENST00000489656 BBOX1O75936 387 aa17.26■□□□□ 0.35
VPS26A-205ENST00000489656 SRGNP10124 158 aa17.26■□□□□ 0.35
VPS26A-205ENST00000489656 SLC5A1P13866 664 aa17.26■□□□□ 0.35
VPS26A-205ENST00000489656 NPR1P16066 1061 aa17.26■□□□□ 0.35
VPS26A-205ENST00000489656 UBE4AQ14139 1066 aa17.26■□□□□ 0.35
VPS26A-205ENST00000489656 TBC1D9Q6ZT07 1266 aa17.26■□□□□ 0.35
VPS26A-205ENST00000489656 CNTROBQ8N137 903 aa17.26■□□□□ 0.35
VPS26A-205ENST00000489656 SLX4Q8IY92 1834 aa17.26■□□□□ 0.35
VPS26A-205ENST00000489656 TRIM6-TRIM34B2RNG4 842 aa17.25■□□□□ 0.35
VPS26A-205ENST00000489656 ADORA1P30542 326 aa17.25■□□□□ 0.35
VPS26A-205ENST00000489656 CCDC158Q5M9N0 1113 aa17.25■□□□□ 0.35
VPS26A-205ENST00000489656 TICAM2Q86XR7 235 aa17.25■□□□□ 0.35
VPS26A-205ENST00000489656 HELBQ8NG08 1087 aaPredicted RBP17.25■□□□□ 0.35
VPS26A-205ENST00000489656 EVI5LQ96CN4 794 aa17.25■□□□□ 0.35
VPS26A-205ENST00000489656 HAUS7Q99871 368 aa17.25■□□□□ 0.35
VPS26A-205ENST00000489656 RFX7Q2KHR2 1363 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms