RNA–Protein interactions for RNA: ENST00000489365.1

PRDM1-207, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-207ENST00000489365 ZNF277Q9NRM2 450 aaPredicted RBP6.54□□□□□ -1.36
PRDM1-207ENST00000489365 HACL1Q9UJ83 578 aa6.54□□□□□ -1.36
PRDM1-207ENST00000489365 CEP350Q5VT06 3117 aa6.53□□□□□ -1.36
PRDM1-207ENST00000489365 KLRG2A4D1S0 409 aaPredicted RBP6.53□□□□□ -1.36
PRDM1-207ENST00000489365 PPEF1O14829 653 aaPredicted RBP6.53□□□□□ -1.36
PRDM1-207ENST00000489365 MAP3K7O43318 606 aa6.53□□□□□ -1.36
PRDM1-207ENST00000489365 IARSP41252 1262 aaKnown RBP6.53□□□□□ -1.36
PRDM1-207ENST00000489365 TMPOP42166 694 aaKnown RBP6.53□□□□□ -1.36
PRDM1-207ENST00000489365 HLFQ16534 295 aa6.53□□□□□ -1.36
PRDM1-207ENST00000489365 EAPPQ56P03 285 aaPredicted RBP6.53□□□□□ -1.36
PRDM1-207ENST00000489365 GIGYF2Q6Y7W6 1299 aaKnown RBP6.53□□□□□ -1.36
PRDM1-207ENST00000489365 DDX46Q7L014 1031 aaKnown RBP6.53□□□□□ -1.36
PRDM1-207ENST00000489365 NUTM1Q86Y26 1132 aa6.53□□□□□ -1.36
PRDM1-207ENST00000489365 NIM1KQ8IY84 436 aa6.53□□□□□ -1.36
PRDM1-207ENST00000489365 SYNE4Q8N205 404 aa6.53□□□□□ -1.36
PRDM1-207ENST00000489365 LARGE2Q8N3Y3 721 aa6.53□□□□□ -1.36
PRDM1-207ENST00000489365 AIDAQ96BJ3 306 aa6.53□□□□□ -1.36
PRDM1-207ENST00000489365 PSMD1Q99460 953 aa6.53□□□□□ -1.36
PRDM1-207ENST00000489365 COL11A2P13942 1736 aaPredicted RBP6.53□□□□□ -1.36
PRDM1-207ENST00000489365 WDR90Q96KV7 1748 aa6.53□□□□□ -1.36
PRDM1-207ENST00000489365 CACNA1SQ13698 1873 aa6.52□□□□□ -1.37
PRDM1-207ENST00000489365 CCDC88AQ3V6T2 1871 aa6.52□□□□□ -1.37
PRDM1-207ENST00000489365 ANKRD31Q8N7Z5 1873 aa6.52□□□□□ -1.37
PRDM1-207ENST00000489365 DDNO94850 711 aaPredicted RBP6.52□□□□□ -1.37
PRDM1-207ENST00000489365 HOXB7P09629 217 aa6.52□□□□□ -1.37
PRDM1-207ENST00000489365 AIMP1Q12904 312 aaKnown RBP6.52□□□□□ -1.37
PRDM1-207ENST00000489365 TSR1Q2NL82 804 aaKnown RBP6.52□□□□□ -1.37
PRDM1-207ENST00000489365 CRY2Q49AN0 593 aa6.52□□□□□ -1.37
PRDM1-207ENST00000489365 C6orf132Q5T0Z8 1188 aa6.52□□□□□ -1.37
PRDM1-207ENST00000489365 HDGFL1Q5TGJ6 251 aa6.52□□□□□ -1.37
PRDM1-207ENST00000489365 TMC4Q7Z404 712 aa6.52□□□□□ -1.37
PRDM1-207ENST00000489365 GPC2Q8N158 579 aa6.52□□□□□ -1.37
PRDM1-207ENST00000489365 CRAMP1Q96RY5 1269 aa6.52□□□□□ -1.37
PRDM1-207ENST00000489365 VPS33BQ9H267 617 aa6.52□□□□□ -1.37
PRDM1-207ENST00000489365 TRMT112Q9UI30 125 aaKnown RBP6.52□□□□□ -1.37
PRDM1-207ENST00000489365 GJA3Q9Y6H8 435 aa6.52□□□□□ -1.37
PRDM1-207ENST00000489365 KDM3BQ7LBC6 1761 aa6.52□□□□□ -1.37
PRDM1-207ENST00000489365 ARFGEF2Q9Y6D5 1785 aa6.52□□□□□ -1.37
PRDM1-207ENST00000489365 SH3TC1Q8TE82 1336 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 FER1L6Q2WGJ9 1857 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 RIC1Q4ADV7 1423 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 SLX4Q8IY92 1834 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 DLG5Q8TDM6 1919 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 DICER1Q9UPY3 1922 aaKnown RBP6.51□□□□□ -1.37
PRDM1-207ENST00000489365 TCERG1O14776 1098 aaKnown RBP6.51□□□□□ -1.37
PRDM1-207ENST00000489365 GPR37O15354 613 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 PPIP5K2O43314 1243 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 BBOX1O75936 387 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 DDX58O95786 925 aaKnown RBP6.51□□□□□ -1.37
PRDM1-207ENST00000489365 HOXA10P31260 410 aaPredicted RBP6.51□□□□□ -1.37
PRDM1-207ENST00000489365 EPHX2P34913 555 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 SUSD4Q5VX71 490 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 DPP8Q6V1X1 898 aaPredicted RBP6.51□□□□□ -1.37
PRDM1-207ENST00000489365 TTLL7Q6ZT98 887 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 COPS6Q7L5N1 327 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 GPIHBP1Q8IV16 184 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 CCDC146Q8IYE0 955 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 JMYQ8N9B5 988 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 ZC3H15Q8WU90 426 aaKnown RBP6.51□□□□□ -1.37
PRDM1-207ENST00000489365 NECTIN2Q92692 538 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 TAF1DQ9H5J8 278 aaPredicted RBP6.51□□□□□ -1.37
PRDM1-207ENST00000489365 DDX21Q9NR30 783 aaKnown RBP eCLIP6.51□□□□□ -1.37
PRDM1-207ENST00000489365 HYPKQ9NX55 129 aa6.51□□□□□ -1.37
PRDM1-207ENST00000489365 DBF4Q9UBU7 674 aaPredicted RBP6.51□□□□□ -1.37
PRDM1-207ENST00000489365 ABCC12Q96J65 1359 aa6.5□□□□□ -1.37
PRDM1-207ENST00000489365 TMEM88BA6NKF7 163 aa6.5□□□□□ -1.37
PRDM1-207ENST00000489365 ZEB1P37275 1124 aaPredicted RBP6.5□□□□□ -1.37
PRDM1-207ENST00000489365 GNAI1P63096 354 aa6.5□□□□□ -1.37
PRDM1-207ENST00000489365 HTRA3P83110 453 aa6.5□□□□□ -1.37
PRDM1-207ENST00000489365 TNIP1Q15025 636 aa6.5□□□□□ -1.37
PRDM1-207ENST00000489365 TPRNQ4KMQ1 711 aa6.5□□□□□ -1.37
PRDM1-207ENST00000489365 ZNF34Q8IZ26 560 aa6.5□□□□□ -1.37
PRDM1-207ENST00000489365 ZNF687Q8N1G0 1237 aa6.5□□□□□ -1.37
PRDM1-207ENST00000489365 DNAJC5GQ8N7S2 189 aa6.5□□□□□ -1.37
PRDM1-207ENST00000489365 XAGE3Q8WTP9 111 aa6.5□□□□□ -1.37
PRDM1-207ENST00000489365 C7orf43Q8WVR3 580 aa6.5□□□□□ -1.37
PRDM1-207ENST00000489365 BEGAINQ9BUH8 593 aa6.5□□□□□ -1.37
PRDM1-207ENST00000489365 CDHR5Q9HBB8 845 aa6.5□□□□□ -1.37
PRDM1-207ENST00000489365 NPDC1Q9NQX5 325 aaPredicted RBP6.5□□□□□ -1.37
PRDM1-207ENST00000489365 ABT1Q9ULW3 272 aaKnown RBP6.5□□□□□ -1.37
PRDM1-207ENST00000489365 ATP6V0A2Q9Y487 856 aa6.5□□□□□ -1.37
PRDM1-207ENST00000489365 SCN4AP35499 1836 aa6.5□□□□□ -1.37
PRDM1-207ENST00000489365 NUP98P52948 1817 aa6.49□□□□□ -1.37
PRDM1-207ENST00000489365 FZD9O00144 591 aa6.49□□□□□ -1.37
PRDM1-207ENST00000489365 CHL1O00533 1208 aa6.49□□□□□ -1.37
PRDM1-207ENST00000489365 NTSR2O95665 410 aa6.49□□□□□ -1.37
PRDM1-207ENST00000489365 PRELPP51888 382 aa6.49□□□□□ -1.37
PRDM1-207ENST00000489365 PTGDRQ13258 359 aa6.49□□□□□ -1.37
PRDM1-207ENST00000489365 TCIRG1Q13488 830 aa6.49□□□□□ -1.37
PRDM1-207ENST00000489365 ANKRD13DQ6ZTN6 518 aa6.49□□□□□ -1.37
PRDM1-207ENST00000489365 RIC3Q7Z5B4 369 aa6.49□□□□□ -1.37
PRDM1-207ENST00000489365 TNS4Q8IZW8 715 aa6.49□□□□□ -1.37
PRDM1-207ENST00000489365 MPNDQ8N594 471 aa6.49□□□□□ -1.37
PRDM1-207ENST00000489365 PLBD2Q8NHP8 589 aa6.49□□□□□ -1.37
PRDM1-207ENST00000489365 BCL2L13Q9BXK5 485 aa6.49□□□□□ -1.37
PRDM1-207ENST00000489365 STK31Q9BXU1 1019 aa6.49□□□□□ -1.37
PRDM1-207ENST00000489365 CHPF2Q9P2E5 772 aa6.49□□□□□ -1.37
PRDM1-207ENST00000489365 MKRN1Q9UHC7 482 aaKnown RBP6.49□□□□□ -1.37
PRDM1-207ENST00000489365 UBN2Q6ZU65 1347 aa6.49□□□□□ -1.37
PRDM1-207ENST00000489365 ZNF541Q9H0D2 1346 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms