RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 COL13A1Q5TAT6 717 aaPredicted RBP8.96□□□□□ -0.98
VPS8-224ENST00000488255 PDE12Q6L8Q7 609 aaKnown RBP8.96□□□□□ -0.98
VPS8-224ENST00000488255 OR13H1Q8NG92 308 aa8.96□□□□□ -0.98
VPS8-224ENST00000488255 NOP53Q9NZM5 478 aaKnown RBP8.96□□□□□ -0.98
VPS8-224ENST00000488255 KANSL3Q9P2N6 904 aa8.96□□□□□ -0.98
VPS8-224ENST00000488255 NID1P14543 1247 aa8.95□□□□□ -0.98
VPS8-224ENST00000488255 AFF1P51825 1210 aaKnown RBP8.95□□□□□ -0.98
VPS8-224ENST00000488255 HYAL2Q12891 473 aa8.95□□□□□ -0.98
VPS8-224ENST00000488255 C1orf127Q8N9H9 656 aa8.95□□□□□ -0.98
VPS8-224ENST00000488255 PLD4Q96BZ4 506 aa8.95□□□□□ -0.98
VPS8-224ENST00000488255 SPACA7Q96KW9 195 aa8.95□□□□□ -0.98
VPS8-224ENST00000488255 RBSNQ9H1K0 784 aa8.95□□□□□ -0.98
VPS8-224ENST00000488255 CNTN3Q9P232 1028 aa8.95□□□□□ -0.98
VPS8-224ENST00000488255 BRPF3Q9ULD4 1205 aa8.95□□□□□ -0.98
VPS8-224ENST00000488255 SOX18P35713 384 aa8.94□□□□□ -0.98
VPS8-224ENST00000488255 COL9A3Q14050 684 aaPredicted RBP8.94□□□□□ -0.98
VPS8-224ENST00000488255 GDF6Q6KF10 455 aaPredicted RBP8.94□□□□□ -0.98
VPS8-224ENST00000488255 DMRTC2Q8IXT2 367 aaPredicted RBP8.94□□□□□ -0.98
VPS8-224ENST00000488255 BIN2Q9UBW5 565 aaPredicted RBP8.94□□□□□ -0.98
VPS8-224ENST00000488255 CES1P23141 567 aa8.93□□□□□ -0.98
VPS8-224ENST00000488255 NCAPG2Q86XI2 1143 aa8.93□□□□□ -0.98
VPS8-224ENST00000488255 PRDM6Q9NQX0 595 aa8.93□□□□□ -0.98
VPS8-224ENST00000488255 FRRS1LQ9P0K9 344 aa8.93□□□□□ -0.98
VPS8-224ENST00000488255 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.93□□□□□ -0.98
VPS8-224ENST00000488255 KRBA1A5PL33 1030 aa8.92□□□□□ -0.98
VPS8-224ENST00000488255 SPDYE3A6NKU9 549 aa8.92□□□□□ -0.98
VPS8-224ENST00000488255 USP5P45974 858 aa8.92□□□□□ -0.98
VPS8-224ENST00000488255 ATP11AP98196 1134 aa8.92□□□□□ -0.98
VPS8-224ENST00000488255 TRIM28Q13263 835 aaKnown RBP8.92□□□□□ -0.98
VPS8-224ENST00000488255 ECM1Q16610 540 aa8.92□□□□□ -0.98
VPS8-224ENST00000488255 PRRT3Q5FWE3 981 aa8.92□□□□□ -0.98
VPS8-224ENST00000488255 TMC1Q8TDI8 760 aa8.92□□□□□ -0.98
VPS8-224ENST00000488255 FOXD3Q9UJU5 478 aaPredicted RBP8.92□□□□□ -0.98
VPS8-224ENST00000488255 SOWAHDA6NJG2 315 aa8.91□□□□□ -0.98
VPS8-224ENST00000488255 NDUFB5O43674 189 aa8.91□□□□□ -0.98
VPS8-224ENST00000488255 PHACTR2O75167 634 aa8.91□□□□□ -0.98
VPS8-224ENST00000488255 ARHGAP4P98171 946 aa8.91□□□□□ -0.98
VPS8-224ENST00000488255 GPAT2Q6NUI2 795 aa8.91□□□□□ -0.98
VPS8-224ENST00000488255 TRIM33Q9UPN9 1127 aa8.91□□□□□ -0.98
VPS8-224ENST00000488255 IVNS1ABPQ9Y6Y0 642 aa8.91□□□□□ -0.98
VPS8-224ENST00000488255 TNFRSF21O75509 655 aa8.9□□□□□ -0.98
VPS8-224ENST00000488255 EHHADHQ08426 723 aa8.9□□□□□ -0.98
VPS8-224ENST00000488255 CEP135Q66GS9 1140 aa8.9□□□□□ -0.98
VPS8-224ENST00000488255 XKR5Q6UX68 686 aa8.9□□□□□ -0.98
VPS8-224ENST00000488255 WFDC8Q8IUA0 241 aa8.9□□□□□ -0.98
VPS8-224ENST00000488255 RASSF4Q9H2L5 321 aa8.9□□□□□ -0.98
VPS8-224ENST00000488255 EREGO14944 169 aa8.89□□□□□ -0.99
VPS8-224ENST00000488255 TRPA1O75762 1119 aa8.89□□□□□ -0.99
VPS8-224ENST00000488255 HOXD8P13378 290 aaPredicted RBP8.89□□□□□ -0.99
VPS8-224ENST00000488255 ACPPP15309 386 aa8.89□□□□□ -0.99
VPS8-224ENST00000488255 GRIK4Q16099 956 aa8.89□□□□□ -0.99
VPS8-224ENST00000488255 GRIK5Q16478 980 aa8.89□□□□□ -0.99
VPS8-224ENST00000488255 PLA2G4EQ3MJ16 856 aa8.89□□□□□ -0.99
VPS8-224ENST00000488255 MSL1Q68DK7 614 aa8.89□□□□□ -0.99
VPS8-224ENST00000488255 AEBP1Q8IUX7 1158 aa8.89□□□□□ -0.99
VPS8-224ENST00000488255 GJD3Q8N144 294 aa8.89□□□□□ -0.99
VPS8-224ENST00000488255 TRAIPQ9BWF2 469 aa8.89□□□□□ -0.99
VPS8-224ENST00000488255 LACRTQ9GZZ8 138 aa8.89□□□□□ -0.99
VPS8-224ENST00000488255 GNEQ9Y223 722 aaKnown RBP8.89□□□□□ -0.99
VPS8-224ENST00000488255 A0A0A0MRY4 1105 aa8.88□□□□□ -0.99
VPS8-224ENST00000488255 SPATA31C1P0DKV0 1188 aa8.88□□□□□ -0.99
VPS8-224ENST00000488255 PDIA4P13667 645 aaKnown RBP8.88□□□□□ -0.99
VPS8-224ENST00000488255 CDC25BP30305 580 aa8.88□□□□□ -0.99
VPS8-224ENST00000488255 IL22RA1Q8N6P7 574 aa8.88□□□□□ -0.99
VPS8-224ENST00000488255 SNX29Q8TEQ0 813 aa8.88□□□□□ -0.99
VPS8-224ENST00000488255 CHRDQ9H2X0 955 aa8.88□□□□□ -0.99
VPS8-224ENST00000488255 SMNDC1O75940 238 aaKnown RBP eCLIP8.87□□□□□ -0.99
VPS8-224ENST00000488255 POLR3DP05423 398 aaPredicted RBP8.87□□□□□ -0.99
VPS8-224ENST00000488255 RAC1P63000 192 aa8.87□□□□□ -0.99
VPS8-224ENST00000488255 TTC9Q92623 222 aa8.87□□□□□ -0.99
VPS8-224ENST00000488255 KIF4AO95239 1232 aa8.86□□□□□ -0.99
VPS8-224ENST00000488255 ALYREFQ86V81 257 aaKnown RBP8.86□□□□□ -0.99
VPS8-224ENST00000488255 CEP120Q8N960 986 aa8.86□□□□□ -0.99
VPS8-224ENST00000488255 SALL4Q9UJQ4 1053 aa8.86□□□□□ -0.99
VPS8-224ENST00000488255 C1QTNF9BB2RNN3 333 aa8.85□□□□□ -0.99
VPS8-224ENST00000488255 APBA3O96018 575 aa8.85□□□□□ -0.99
VPS8-224ENST00000488255 CHRNA4P43681 627 aa8.85□□□□□ -0.99
VPS8-224ENST00000488255 KCNA1Q09470 495 aa8.85□□□□□ -0.99
VPS8-224ENST00000488255 PMEPA1Q969W9 287 aa8.85□□□□□ -0.99
VPS8-224ENST00000488255 PBX4Q9BYU1 374 aa8.85□□□□□ -0.99
VPS8-224ENST00000488255 ITGB2P05107 769 aa8.84□□□□□ -0.99
VPS8-224ENST00000488255 CD163Q86VB7 1156 aa8.84□□□□□ -0.99
VPS8-224ENST00000488255 HHIPQ96QV1 700 aa8.84□□□□□ -0.99
VPS8-224ENST00000488255 BAG6P46379 1132 aa8.83□□□□□ -1
VPS8-224ENST00000488255 PDE3BQ13370 1112 aa8.83□□□□□ -1
VPS8-224ENST00000488255 ORC1Q13415 861 aa8.83□□□□□ -1
VPS8-224ENST00000488255 TXNDC11Q6PKC3 985 aa8.83□□□□□ -1
VPS8-224ENST00000488255 SHISA2Q6UWI4 295 aa8.83□□□□□ -1
VPS8-224ENST00000488255 FMR1NBQ8N0W7 255 aaPredicted RBP8.83□□□□□ -1
VPS8-224ENST00000488255 POP1Q99575 1024 aaKnown RBP8.83□□□□□ -1
VPS8-224ENST00000488255 NIF3L1Q9GZT8 377 aa8.83□□□□□ -1
VPS8-224ENST00000488255 ZFYVE28Q9HCC9 887 aa8.83□□□□□ -1
VPS8-224ENST00000488255 LATS2Q9NRM7 1088 aa8.83□□□□□ -1
VPS8-224ENST00000488255 AMOTL2Q9Y2J4 779 aa8.83□□□□□ -1
VPS8-224ENST00000488255 MSTNO14793 375 aa8.82□□□□□ -1
VPS8-224ENST00000488255 MAPK1P28482 360 aa8.82□□□□□ -1
VPS8-224ENST00000488255 USPL1Q5W0Q7 1092 aa8.82□□□□□ -1
VPS8-224ENST00000488255 ADAMTSL4Q6UY14 1074 aa8.82□□□□□ -1
VPS8-224ENST00000488255 OSMRQ99650 979 aa8.82□□□□□ -1
VPS8-224ENST00000488255 SH2B1Q9NRF2 756 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms