RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 FAM177A1Q8N128 213 aaPredicted RBP16.63■□□□□ 0.25
COL16A1-214ENST00000488128 ERO1AQ96HE7 468 aa16.63■□□□□ 0.25
COL16A1-214ENST00000488128 PRAMEF22A3QJZ6 481 aa16.62■□□□□ 0.25
COL16A1-214ENST00000488128 EIF4A1P60842 406 aaKnown RBP16.62■□□□□ 0.25
COL16A1-214ENST00000488128 PROSER3Q2NL68 480 aa16.62■□□□□ 0.25
COL16A1-214ENST00000488128 SLFNL1Q499Z3 407 aa16.62■□□□□ 0.25
COL16A1-214ENST00000488128 NOL10Q9BSC4 688 aaKnown RBP16.62■□□□□ 0.25
COL16A1-214ENST00000488128 TMX1Q9H3N1 280 aa16.62■□□□□ 0.25
COL16A1-214ENST00000488128 MAP3K2Q9Y2U5 619 aa16.62■□□□□ 0.25
COL16A1-214ENST00000488128 CCDC66A2RUB6 948 aa16.62■□□□□ 0.25
COL16A1-214ENST00000488128 SASH1O94885 1247 aa16.62■□□□□ 0.25
COL16A1-214ENST00000488128 TEFQ10587 303 aa16.62■□□□□ 0.25
COL16A1-214ENST00000488128 STX1AQ16623 288 aa16.62■□□□□ 0.25
COL16A1-214ENST00000488128 RNF20Q5VTR2 975 aa16.62■□□□□ 0.25
COL16A1-214ENST00000488128 TIGD1Q96MW7 591 aa16.62■□□□□ 0.25
COL16A1-214ENST00000488128 USP28Q96RU2 1077 aa16.62■□□□□ 0.25
COL16A1-214ENST00000488128 NCOA5Q9HCD5 579 aaKnown RBP16.62■□□□□ 0.25
COL16A1-214ENST00000488128 BTBD11A6QL63 1104 aa16.61■□□□□ 0.25
COL16A1-214ENST00000488128 TMC6Q7Z403 805 aa16.61■□□□□ 0.25
COL16A1-214ENST00000488128 HOMER1Q86YM7 354 aa16.61■□□□□ 0.25
COL16A1-214ENST00000488128 KINO60870 393 aaKnown RBP16.61■□□□□ 0.25
COL16A1-214ENST00000488128 ARHGAP29Q52LW3 1261 aa16.61■□□□□ 0.25
COL16A1-214ENST00000488128 E4F1Q66K89 784 aaPredicted RBP16.61■□□□□ 0.25
COL16A1-214ENST00000488128 CHST3Q7LGC8 479 aa16.61■□□□□ 0.25
COL16A1-214ENST00000488128 MRFAP1L1Q96HT8 127 aa16.61■□□□□ 0.25
COL16A1-214ENST00000488128 SDF4Q9BRK5 362 aa16.61■□□□□ 0.25
COL16A1-214ENST00000488128 SETD1BQ9UPS6 1966 aaKnown RBP16.61■□□□□ 0.25
COL16A1-214ENST00000488128 ADCY9O60503 1353 aa16.61■□□□□ 0.25
COL16A1-214ENST00000488128 A0A1B0GVL5 298 aa16.6■□□□□ 0.25
COL16A1-214ENST00000488128 CLCN6P51797 869 aa16.6■□□□□ 0.25
COL16A1-214ENST00000488128 CCDC73Q6ZRK6 1079 aa16.6■□□□□ 0.25
COL16A1-214ENST00000488128 KCNB2Q92953 911 aa16.6■□□□□ 0.25
COL16A1-214ENST00000488128 GOLGA8FQ08AF8 430 aa16.6■□□□□ 0.25
COL16A1-214ENST00000488128 GOLGA8DPQ0D2H9 430 aa16.6■□□□□ 0.25
COL16A1-214ENST00000488128 FSIP1Q8NA03 581 aa16.6■□□□□ 0.25
COL16A1-214ENST00000488128 ZCCHC17Q9NP64 241 aaKnown RBP16.6■□□□□ 0.25
COL16A1-214ENST00000488128 SEC31AO94979 1220 aaKnown RBP16.6■□□□□ 0.25
COL16A1-214ENST00000488128 SCRN1Q12765 414 aa16.6■□□□□ 0.25
COL16A1-214ENST00000488128 ANKRD1Q15327 319 aa16.6■□□□□ 0.25
COL16A1-214ENST00000488128 NBPF11Q86T75 865 aa16.6■□□□□ 0.25
COL16A1-214ENST00000488128 NEK11Q8NG66 645 aa16.6■□□□□ 0.25
COL16A1-214ENST00000488128 GCP02774 474 aa16.59■□□□□ 0.25
COL16A1-214ENST00000488128 HNRNPH2P55795 449 aaKnown RBP16.59■□□□□ 0.25
COL16A1-214ENST00000488128 G3BP1Q13283 466 aaKnown RBP eCLIP16.59■□□□□ 0.25
COL16A1-214ENST00000488128 OTUD7BQ6GQQ9 843 aa16.59■□□□□ 0.25
COL16A1-214ENST00000488128 ZFP91Q96JP5 570 aaPredicted RBP16.59■□□□□ 0.25
COL16A1-214ENST00000488128 IFNKQ9P0W0 207 aa16.59■□□□□ 0.25
COL16A1-214ENST00000488128 XPO4Q9C0E2 1151 aaKnown RBP16.59■□□□□ 0.25
COL16A1-214ENST00000488128 CFAP45Q9UL16 551 aa16.59■□□□□ 0.25
COL16A1-214ENST00000488128 CAPN2P17655 700 aa16.58■□□□□ 0.25
COL16A1-214ENST00000488128 CDC25BP30305 580 aa16.58■□□□□ 0.25
COL16A1-214ENST00000488128 DPCR1Q3MIW9 517 aa16.58■□□□□ 0.25
COL16A1-214ENST00000488128 PPP1R13BQ96KQ4 1090 aa16.58■□□□□ 0.25
COL16A1-214ENST00000488128 NEK1Q96PY6 1258 aa16.58■□□□□ 0.25
COL16A1-214ENST00000488128 DNAJC2Q99543 621 aaKnown RBP16.58■□□□□ 0.25
COL16A1-214ENST00000488128 BICC1Q9H694 974 aaKnown RBP16.58■□□□□ 0.25
COL16A1-214ENST00000488128 DNAI1Q9UI46 699 aa16.58■□□□□ 0.25
COL16A1-214ENST00000488128 CEMIPQ8WUJ3 1361 aa16.58■□□□□ 0.24
COL16A1-214ENST00000488128 MARF1Q9Y4F3 1742 aaKnown RBP16.58■□□□□ 0.24
COL16A1-214ENST00000488128 BABAM1Q9NWV8 329 aa16.58■□□□□ 0.24
COL16A1-214ENST00000488128 FHOD1Q9Y613 1164 aa16.58■□□□□ 0.24
COL16A1-214ENST00000488128 NPHP4O75161 1426 aaPredicted RBP16.57■□□□□ 0.24
COL16A1-214ENST00000488128 APOBRQ0VD83 1088 aa16.57■□□□□ 0.24
COL16A1-214ENST00000488128 ARMCX5Q6P1M9 558 aa16.57■□□□□ 0.24
COL16A1-214ENST00000488128 SARM1Q6SZW1 724 aa16.57■□□□□ 0.24
COL16A1-214ENST00000488128 KCNH5Q8NCM2 988 aa16.57■□□□□ 0.24
COL16A1-214ENST00000488128 SUCLG2Q96I99 432 aa16.57■□□□□ 0.24
COL16A1-214ENST00000488128 A0A0G2JLW4 131 aa16.57■□□□□ 0.24
COL16A1-214ENST00000488128 ADD1P35611 737 aaKnown RBP16.57■□□□□ 0.24
COL16A1-214ENST00000488128 CEP57L1Q8IYX8 460 aa16.57■□□□□ 0.24
COL16A1-214ENST00000488128 CHMP4AQ9BY43 222 aa16.57■□□□□ 0.24
COL16A1-214ENST00000488128 USP42Q9H9J4 1324 aaKnown RBP16.57■□□□□ 0.24
COL16A1-214ENST00000488128 TAF5LO75529 589 aa16.56■□□□□ 0.24
COL16A1-214ENST00000488128 HSP90AA4PQ58FG1 418 aa16.56■□□□□ 0.24
COL16A1-214ENST00000488128 AXIN2Q9Y2T1 843 aa16.56■□□□□ 0.24
COL16A1-214ENST00000488128 PNMA6AP0CW24 399 aaPredicted RBP16.56■□□□□ 0.24
COL16A1-214ENST00000488128 LMOD1P29536 600 aaPredicted RBP16.56■□□□□ 0.24
COL16A1-214ENST00000488128 PLEKHO1Q53GL0 409 aaPredicted RBP16.56■□□□□ 0.24
COL16A1-214ENST00000488128 RAB11FIP4Q86YS3 637 aa16.56■□□□□ 0.24
COL16A1-214ENST00000488128 DNAJC5Q9H3Z4 198 aa16.56■□□□□ 0.24
COL16A1-214ENST00000488128 ANO10Q9NW15 660 aa16.56■□□□□ 0.24
COL16A1-214ENST00000488128 LRRC37A3O60309 1634 aa16.56■□□□□ 0.24
COL16A1-214ENST00000488128 NEMFO60524 1076 aa16.56■□□□□ 0.24
COL16A1-214ENST00000488128 POLR3DP05423 398 aaPredicted RBP16.56■□□□□ 0.24
COL16A1-214ENST00000488128 GYS2P54840 703 aa16.56■□□□□ 0.24
COL16A1-214ENST00000488128 PDE4CQ08493 712 aa16.56■□□□□ 0.24
COL16A1-214ENST00000488128 BMS1Q14692 1282 aaKnown RBP16.56■□□□□ 0.24
COL16A1-214ENST00000488128 ANKRD24Q8TF21 1146 aa16.56■□□□□ 0.24
COL16A1-214ENST00000488128 COL15A1P39059 1388 aa16.55■□□□□ 0.24
COL16A1-214ENST00000488128 CYP21A2P08686 494 aa16.55■□□□□ 0.24
COL16A1-214ENST00000488128 PLA2G4AP47712 749 aa16.55■□□□□ 0.24
COL16A1-214ENST00000488128 ZRSR1Q15695 479 aaKnown RBP16.55■□□□□ 0.24
COL16A1-214ENST00000488128 AKAP4Q5JQC9 854 aa16.55■□□□□ 0.24
COL16A1-214ENST00000488128 C1orf141Q5JVX7 400 aa16.55■□□□□ 0.24
COL16A1-214ENST00000488128 GJB4Q9NTQ9 266 aa16.55■□□□□ 0.24
COL16A1-214ENST00000488128 FAM208AQ9UK61 1670 aaKnown RBP16.55■□□□□ 0.24
COL16A1-214ENST00000488128 URI1O94763 535 aaPredicted RBP16.55■□□□□ 0.24
COL16A1-214ENST00000488128 SFPQP23246 707 aaKnown RBP eCLIP16.55■□□□□ 0.24
COL16A1-214ENST00000488128 CCDC34Q96HJ3 373 aa16.55■□□□□ 0.24
COL16A1-214ENST00000488128 KAZALD1Q96I82 304 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms