RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 LOC102724428A0A0B4J2F2 783 aa5.66□□□□□ -1.5
R3HDM1-219ENST00000488035 MICAL2O94851 1124 aa5.66□□□□□ -1.5
R3HDM1-219ENST00000488035 WNT11O96014 354 aa5.66□□□□□ -1.5
R3HDM1-219ENST00000488035 EGFRP00533 1210 aa5.66□□□□□ -1.5
R3HDM1-219ENST00000488035 PSAPP07602 524 aa5.66□□□□□ -1.5
R3HDM1-219ENST00000488035 RASA1P20936 1047 aa5.66□□□□□ -1.5
R3HDM1-219ENST00000488035 IGFBP4P22692 258 aa5.66□□□□□ -1.5
R3HDM1-219ENST00000488035 SIK1P57059 783 aa5.66□□□□□ -1.5
R3HDM1-219ENST00000488035 NFIAQ12857 509 aa5.66□□□□□ -1.5
R3HDM1-219ENST00000488035 UVSSAQ2YD98 709 aa5.66□□□□□ -1.5
R3HDM1-219ENST00000488035 HDGFL1Q5TGJ6 251 aa5.66□□□□□ -1.5
R3HDM1-219ENST00000488035 KLK14Q9P0G3 267 aa5.66□□□□□ -1.5
R3HDM1-219ENST00000488035 PRR19A6NJB7 356 aa5.65□□□□□ -1.5
R3HDM1-219ENST00000488035 SETDB1Q15047 1291 aa5.65□□□□□ -1.5
R3HDM1-219ENST00000488035 OGFOD2Q6N063 350 aa5.65□□□□□ -1.5
R3HDM1-219ENST00000488035 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-219ENST00000488035 UCN2Q96RP3 112 aa5.65□□□□□ -1.5
R3HDM1-219ENST00000488035 PPME1Q9Y570 386 aa5.65□□□□□ -1.5
R3HDM1-219ENST00000488035 DGKZQ13574 1117 aa5.64□□□□□ -1.51
R3HDM1-219ENST00000488035 RNF43Q68DV7 783 aa5.64□□□□□ -1.51
R3HDM1-219ENST00000488035 LARP1Q6PKG0 1096 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-219ENST00000488035 AGGF1Q8N302 714 aaeCLIP5.64□□□□□ -1.51
R3HDM1-219ENST00000488035 UTP4Q969X6 686 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-219ENST00000488035 CALR3Q96L12 384 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-219ENST00000488035 UBL7Q96S82 380 aaPredicted RBP5.64□□□□□ -1.51
R3HDM1-219ENST00000488035 DBNDD2Q9BQY9 259 aa5.64□□□□□ -1.51
R3HDM1-219ENST00000488035 J3QW42 95 aa5.63□□□□□ -1.51
R3HDM1-219ENST00000488035 XYLBO75191 536 aa5.63□□□□□ -1.51
R3HDM1-219ENST00000488035 C8AP07357 584 aa5.63□□□□□ -1.51
R3HDM1-219ENST00000488035 HOXD8P13378 290 aaPredicted RBP5.63□□□□□ -1.51
R3HDM1-219ENST00000488035 SOX18P35713 384 aa5.63□□□□□ -1.51
R3HDM1-219ENST00000488035 C11orf91Q3C1V1 193 aa5.63□□□□□ -1.51
R3HDM1-219ENST00000488035 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.63□□□□□ -1.514e-7■■■■■ 57.4
R3HDM1-219ENST00000488035 RTCBQ9Y3I0 505 aaKnown RBP5.63□□□□□ -1.51
R3HDM1-219ENST00000488035 ARMC10Q8N2F6 343 aa5.62□□□□□ -1.51
R3HDM1-219ENST00000488035 VTI1AQ96AJ9 217 aa5.62□□□□□ -1.51
R3HDM1-219ENST00000488035 C7orf69Q9H7B7 122 aa5.62□□□□□ -1.51
R3HDM1-219ENST00000488035 CD68P34810 354 aaPredicted RBP5.61□□□□□ -1.51
R3HDM1-219ENST00000488035 ACAD11Q709F0 780 aa5.61□□□□□ -1.51
R3HDM1-219ENST00000488035 CBLL1Q75N03 491 aa5.61□□□□□ -1.51
R3HDM1-219ENST00000488035 TRIM42Q8IWZ5 723 aa5.61□□□□□ -1.51
R3HDM1-219ENST00000488035 FAM46AQ96IP4 442 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-219ENST00000488035 NSUN5Q96P11 429 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-219ENST00000488035 OPLAHO14841 1288 aa5.6□□□□□ -1.51
R3HDM1-219ENST00000488035 FOXO3O43524 673 aa5.6□□□□□ -1.51
R3HDM1-219ENST00000488035 MMP20O60882 483 aa5.6□□□□□ -1.51
R3HDM1-219ENST00000488035 CFAP70Q5T0N1 1121 aa5.6□□□□□ -1.51
R3HDM1-219ENST00000488035 CLEC10AQ8IUN9 316 aa5.6□□□□□ -1.51
R3HDM1-219ENST00000488035 CMTR1Q8N1G2 835 aaKnown RBP5.6□□□□□ -1.51
R3HDM1-219ENST00000488035 CCDC97Q96F63 343 aaPredicted RBP5.6□□□□□ -1.51
R3HDM1-219ENST00000488035 MYO19Q96H55 970 aa5.6□□□□□ -1.51
R3HDM1-219ENST00000488035 MYRFLQ96LU7 910 aa5.6□□□□□ -1.51
R3HDM1-219ENST00000488035 QTRT2Q9H974 415 aaKnown RBP5.6□□□□□ -1.51
R3HDM1-219ENST00000488035 SERPINA10Q9UK55 444 aa5.6□□□□□ -1.51
R3HDM1-219ENST00000488035 TRIM33Q9UPN9 1127 aa5.6□□□□□ -1.51
R3HDM1-219ENST00000488035 HMX2A2RU54 273 aa5.59□□□□□ -1.51
R3HDM1-219ENST00000488035 FAM117BQ6P1L5 589 aa5.59□□□□□ -1.51
R3HDM1-219ENST00000488035 RGL4Q8IZJ4 473 aa5.59□□□□□ -1.51
R3HDM1-219ENST00000488035 KLHL23Q8NBE8 558 aa5.59□□□□□ -1.51
R3HDM1-219ENST00000488035 FAM83CQ9BQN1 747 aa5.59□□□□□ -1.51
R3HDM1-219ENST00000488035 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
R3HDM1-219ENST00000488035 LINC01387J3KSC0 135 aa5.58□□□□□ -1.52
R3HDM1-219ENST00000488035 SART1O43290 800 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-219ENST00000488035 ITGB5P18084 799 aa5.58□□□□□ -1.52
R3HDM1-219ENST00000488035 DUOXA2Q1HG44 320 aa5.58□□□□□ -1.52
R3HDM1-219ENST00000488035 GALNT11Q8NCW6 608 aa5.58□□□□□ -1.52
R3HDM1-219ENST00000488035 GIMAP7Q8NHV1 300 aa5.58□□□□□ -1.52
R3HDM1-219ENST00000488035 SPACA7Q96KW9 195 aa5.58□□□□□ -1.52
R3HDM1-219ENST00000488035 PPP1R12CQ9BZL4 782 aa5.58□□□□□ -1.52
R3HDM1-219ENST00000488035 TFIP11Q9UBB9 837 aaKnown RBP5.58□□□□□ -1.52
R3HDM1-219ENST00000488035 FAM177BA6PVY3 158 aa5.57□□□□□ -1.52
R3HDM1-219ENST00000488035 SMNDC1O75940 238 aaKnown RBP eCLIP5.57□□□□□ -1.52
R3HDM1-219ENST00000488035 WISP1O95388 367 aa5.57□□□□□ -1.52
R3HDM1-219ENST00000488035 RFX1P22670 979 aa5.57□□□□□ -1.52
R3HDM1-219ENST00000488035 CDC27P30260 824 aa5.57□□□□□ -1.52
R3HDM1-219ENST00000488035 DPYDQ12882 1025 aa5.57□□□□□ -1.52
R3HDM1-219ENST00000488035 PTK7Q13308 1070 aa5.57□□□□□ -1.52
R3HDM1-219ENST00000488035 NLRP13Q86W25 1043 aa5.57□□□□□ -1.52
R3HDM1-219ENST00000488035 TREML1Q86YW5 311 aa5.57□□□□□ -1.52
R3HDM1-219ENST00000488035 FAM20CQ8IXL6 584 aa5.57□□□□□ -1.52
R3HDM1-219ENST00000488035 ABI1Q8IZP0 508 aa5.57□□□□□ -1.52
R3HDM1-219ENST00000488035 SHKBP1Q8TBC3 707 aa5.57□□□□□ -1.52
R3HDM1-219ENST00000488035 ASIC4Q96FT7 647 aa5.57□□□□□ -1.52
R3HDM1-219ENST00000488035 ANGEL1Q9UNK9 670 aaKnown RBP5.57□□□□□ -1.52
R3HDM1-219ENST00000488035 MAFBQ9Y5Q3 323 aaPredicted RBP5.57□□□□□ -1.52
R3HDM1-219ENST00000488035 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.56□□□□□ -1.52
R3HDM1-219ENST00000488035 TM4SF5O14894 197 aa5.56□□□□□ -1.52
R3HDM1-219ENST00000488035 WEE1P30291 646 aa5.56□□□□□ -1.52
R3HDM1-219ENST00000488035 HYAL2Q12891 473 aa5.56□□□□□ -1.52
R3HDM1-219ENST00000488035 FBLN7Q53RD9 439 aa5.56□□□□□ -1.52
R3HDM1-219ENST00000488035 ANKRD34AQ69YU3 496 aa5.56□□□□□ -1.52
R3HDM1-219ENST00000488035 KIAA1211Q6ZU35 1233 aa5.56□□□□□ -1.52
R3HDM1-219ENST00000488035 BEND4Q6ZU67 534 aa5.56□□□□□ -1.52
R3HDM1-219ENST00000488035 ANKMY2Q8IV38 441 aa5.56□□□□□ -1.52
R3HDM1-219ENST00000488035 KCNF1Q9H3M0 494 aa5.56□□□□□ -1.52
R3HDM1-219ENST00000488035 USP20Q9Y2K6 914 aa5.56□□□□□ -1.52
R3HDM1-219ENST00000488035 HIF3AQ9Y2N7 669 aa5.56□□□□□ -1.52
R3HDM1-219ENST00000488035 KCNMB2Q9Y691 235 aa5.56□□□□□ -1.52
R3HDM1-219ENST00000488035 FSCN2O14926 492 aa5.55□□□□□ -1.52
R3HDM1-219ENST00000488035 LGR5O75473 907 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms