RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 TARSP26639 723 aaKnown RBP8.08□□□□□ -1.12
UBR3-211ENST00000487689 AGGF1Q8N302 714 aaeCLIP8.08□□□□□ -1.12
UBR3-211ENST00000487689 IFT43Q96FT9 208 aa8.08□□□□□ -1.12
UBR3-211ENST00000487689 ARXQ96QS3 562 aa8.08□□□□□ -1.12
UBR3-211ENST00000487689 STOML1Q9UBI4 398 aa8.08□□□□□ -1.12
UBR3-211ENST00000487689 EIF2AK2P19525 551 aaKnown RBP8.07□□□□□ -1.12
UBR3-211ENST00000487689 INPP5BP32019 993 aa8.07□□□□□ -1.12
UBR3-211ENST00000487689 MYO19Q96H55 970 aa8.07□□□□□ -1.12
UBR3-211ENST00000487689 QTRT2Q9H974 415 aaKnown RBP8.07□□□□□ -1.12
UBR3-211ENST00000487689 ACIN1Q9UKV3 1341 aaKnown RBP8.06□□□□□ -1.12
UBR3-211ENST00000487689 SASH3O75995 380 aa8.06□□□□□ -1.12
UBR3-211ENST00000487689 SPINK2P20155 84 aa8.06□□□□□ -1.12
UBR3-211ENST00000487689 ZDHHC13Q8IUH4 622 aa8.06□□□□□ -1.12
UBR3-211ENST00000487689 KRTAP4-9Q9BYQ8 210 aa8.06□□□□□ -1.12
UBR3-211ENST00000487689 RBSNQ9H1K0 784 aa8.06□□□□□ -1.12
UBR3-211ENST00000487689 FAM13BQ9NYF5 915 aa8.06□□□□□ -1.12
UBR3-211ENST00000487689 CMTR1Q8N1G2 835 aaKnown RBP8.05□□□□□ -1.12
UBR3-211ENST00000487689 CCDC97Q96F63 343 aaPredicted RBP8.05□□□□□ -1.12
UBR3-211ENST00000487689 UBL7Q96S82 380 aaPredicted RBP8.05□□□□□ -1.12
UBR3-211ENST00000487689 PRMT3O60678 531 aa8.04□□□□□ -1.12
UBR3-211ENST00000487689 PSAPP07602 524 aa8.04□□□□□ -1.12
UBR3-211ENST00000487689 GRIK1P39086 918 aa8.04□□□□□ -1.12
UBR3-211ENST00000487689 GDF6Q6KF10 455 aaPredicted RBP8.04□□□□□ -1.12
UBR3-211ENST00000487689 INTS5Q6P9B9 1019 aaKnown RBP8.04□□□□□ -1.12
UBR3-211ENST00000487689 TREML1Q86YW5 311 aa8.04□□□□□ -1.12
UBR3-211ENST00000487689 RGL4Q8IZJ4 473 aa8.04□□□□□ -1.12
UBR3-211ENST00000487689 IL22RA1Q8N6P7 574 aa8.04□□□□□ -1.12
UBR3-211ENST00000487689 PLD4Q96BZ4 506 aa8.04□□□□□ -1.12
UBR3-211ENST00000487689 PRIMPOLQ96LW4 560 aa8.04□□□□□ -1.12
UBR3-211ENST00000487689 RTCBQ9Y3I0 505 aaKnown RBP8.04□□□□□ -1.12
UBR3-211ENST00000487689 DHX15O43143 795 aaKnown RBP8.03□□□□□ -1.12
UBR3-211ENST00000487689 XYLBO75191 536 aa8.03□□□□□ -1.12
UBR3-211ENST00000487689 BRD2P25440 801 aaKnown RBP8.03□□□□□ -1.12
UBR3-211ENST00000487689 NRLP54845 237 aa8.03□□□□□ -1.12
UBR3-211ENST00000487689 ELOAQ14241 798 aaKnown RBP8.03□□□□□ -1.12
UBR3-211ENST00000487689 SETDB1Q15047 1291 aa8.03□□□□□ -1.12
UBR3-211ENST00000487689 SRA1Q9HD15 236 aaKnown RBP8.03□□□□□ -1.12
UBR3-211ENST00000487689 GHRHP01286 108 aa8.02□□□□□ -1.13
UBR3-211ENST00000487689 NFIAQ12857 509 aa8.02□□□□□ -1.13
UBR3-211ENST00000487689 C16orf46Q6P387 395 aa8.02□□□□□ -1.13
UBR3-211ENST00000487689 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.02□□□□□ -1.13
UBR3-211ENST00000487689 J3QW42 95 aa8.01□□□□□ -1.13
UBR3-211ENST00000487689 FKBP5Q13451 457 aaPredicted RBP8.01□□□□□ -1.13
UBR3-211ENST00000487689 DTX1Q86Y01 620 aa8.01□□□□□ -1.13
UBR3-211ENST00000487689 MAP4K3Q8IVH8 894 aa8.01□□□□□ -1.13
UBR3-211ENST00000487689 ARMC10Q8N2F6 343 aa8.01□□□□□ -1.13
UBR3-211ENST00000487689 DCAF11Q8TEB1 546 aa8.01□□□□□ -1.13
UBR3-211ENST00000487689 WNT11O96014 354 aa8□□□□□ -1.13
UBR3-211ENST00000487689 PIK3R5Q8WYR1 880 aa8□□□□□ -1.13
UBR3-211ENST00000487689 C7orf69Q9H7B7 122 aa8□□□□□ -1.13
UBR3-211ENST00000487689 TLR7Q9NYK1 1049 aaKnown RBP8□□□□□ -1.13
UBR3-211ENST00000487689 ADGRE2Q9UHX3 823 aa8□□□□□ -1.13
UBR3-211ENST00000487689 FNDC3AQ9Y2H6 1198 aaKnown RBP8□□□□□ -1.13
UBR3-211ENST00000487689 LOC102724428A0A0B4J2F2 783 aa7.99□□□□□ -1.13
UBR3-211ENST00000487689 PRR19A6NJB7 356 aa7.99□□□□□ -1.13
UBR3-211ENST00000487689 EGFRP00533 1210 aa7.99□□□□□ -1.13
UBR3-211ENST00000487689 SIK1P57059 783 aa7.99□□□□□ -1.13
UBR3-211ENST00000487689 JAG1P78504 1218 aa7.99□□□□□ -1.13
UBR3-211ENST00000487689 COX20Q5RI15 118 aa7.99□□□□□ -1.13
UBR3-211ENST00000487689 TRIM42Q8IWZ5 723 aa7.99□□□□□ -1.13
UBR3-211ENST00000487689 COL26A1Q96A83 441 aa7.99□□□□□ -1.13
UBR3-211ENST00000487689 SERPINA10Q9UK55 444 aa7.99□□□□□ -1.13
UBR3-211ENST00000487689 LRFN2Q9ULH4 789 aa7.99□□□□□ -1.13
UBR3-211ENST00000487689 MKNK1Q9BUB5 465 aa7.98□□□□□ -1.13
UBR3-211ENST00000487689 ZMYND15Q9H091 742 aa7.98□□□□□ -1.13
UBR3-211ENST00000487689 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.97□□□□□ -1.13
UBR3-211ENST00000487689 FAM177BA6PVY3 158 aa7.97□□□□□ -1.13
UBR3-211ENST00000487689 OPLAHO14841 1288 aa7.97□□□□□ -1.13
UBR3-211ENST00000487689 ATG7O95352 703 aa7.97□□□□□ -1.13
UBR3-211ENST00000487689 WISP1O95388 367 aa7.97□□□□□ -1.13
UBR3-211ENST00000487689 RNF43Q68DV7 783 aa7.97□□□□□ -1.13
UBR3-211ENST00000487689 STK32AQ8WU08 396 aa7.97□□□□□ -1.13
UBR3-211ENST00000487689 UTP4Q969X6 686 aaKnown RBP7.97□□□□□ -1.13
UBR3-211ENST00000487689 SPACA7Q96KW9 195 aa7.97□□□□□ -1.13
UBR3-211ENST00000487689 DBNDD2Q9BQY9 259 aa7.97□□□□□ -1.13
UBR3-211ENST00000487689 CEP41Q9BYV8 373 aa7.97□□□□□ -1.13
UBR3-211ENST00000487689 TRIM33Q9UPN9 1127 aa7.97□□□□□ -1.13
UBR3-211ENST00000487689 USP20Q9Y2K6 914 aa7.97□□□□□ -1.13
UBR3-211ENST00000487689 HMX2A2RU54 273 aa7.96□□□□□ -1.14
UBR3-211ENST00000487689 ABTB2Q8N961 1025 aa7.96□□□□□ -1.14
UBR3-211ENST00000487689 GALNT11Q8NCW6 608 aa7.96□□□□□ -1.14
UBR3-211ENST00000487689 TTC16Q8NEE8 873 aa7.96□□□□□ -1.14
UBR3-211ENST00000487689 PBXIP1Q96AQ6 731 aa7.96□□□□□ -1.14
UBR3-211ENST00000487689 NSUN5Q96P11 429 aaKnown RBP7.96□□□□□ -1.14
UBR3-211ENST00000487689 ZMIZ1Q9ULJ6 1067 aa7.96□□□□□ -1.14
UBR3-211ENST00000487689 UBAP1LF5GYI3 381 aa7.95□□□□□ -1.14
UBR3-211ENST00000487689 TTC39BQ5VTQ0 682 aaPredicted RBP7.95□□□□□ -1.14
UBR3-211ENST00000487689 ACAD11Q709F0 780 aa7.95□□□□□ -1.14
UBR3-211ENST00000487689 NLRP13Q86W25 1043 aa7.95□□□□□ -1.14
UBR3-211ENST00000487689 CACTIN-AS1Q8N1I8 211 aa7.95□□□□□ -1.14
UBR3-211ENST00000487689 CXXC1Q9P0U4 656 aaPredicted RBP7.95□□□□□ -1.14
UBR3-211ENST00000487689 SOX18P35713 384 aa7.94□□□□□ -1.14
UBR3-211ENST00000487689 NAA30Q147X3 362 aaPredicted RBP7.94□□□□□ -1.14
UBR3-211ENST00000487689 OCLNQ16625 522 aa7.94□□□□□ -1.14
UBR3-211ENST00000487689 UVSSAQ2YD98 709 aa7.94□□□□□ -1.14
UBR3-211ENST00000487689 FAM46AQ96IP4 442 aaKnown RBP7.94□□□□□ -1.14
UBR3-211ENST00000487689 MUC3BQ9H195 1237 aa7.94□□□□□ -1.14
UBR3-211ENST00000487689 PPME1Q9Y570 386 aa7.94□□□□□ -1.14
UBR3-211ENST00000487689 MMP20O60882 483 aa7.93□□□□□ -1.14
UBR3-211ENST00000487689 TMEM164Q5U3C3 297 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms