RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 TBC1D9Q6ZT07 1266 aa9.8□□□□□ -0.84
ZNF541-204ENST00000487275 DDX46Q7L014 1031 aaKnown RBP9.8□□□□□ -0.84
ZNF541-204ENST00000487275 DBNDD2Q9BQY9 259 aa9.8□□□□□ -0.84
ZNF541-204ENST00000487275 DBNLQ9UJU6 430 aaKnown RBP9.8□□□□□ -0.84
ZNF541-204ENST00000487275 PARP3Q9Y6F1 533 aa9.8□□□□□ -0.84
ZNF541-204ENST00000487275 RIC1Q4ADV7 1423 aa9.8□□□□□ -0.84
ZNF541-204ENST00000487275 LRP5O75197 1615 aa9.79□□□□□ -0.84
ZNF541-204ENST00000487275 MAP4K4O95819 1239 aaPredicted RBP9.79□□□□□ -0.84
ZNF541-204ENST00000487275 ATP5JP18859 108 aa9.79□□□□□ -0.84
ZNF541-204ENST00000487275 MFAP1P55081 439 aaKnown RBP9.79□□□□□ -0.84
ZNF541-204ENST00000487275 TIMM10P62072 90 aa9.79□□□□□ -0.84
ZNF541-204ENST00000487275 ATP2B3Q16720 1220 aa9.79□□□□□ -0.84
ZNF541-204ENST00000487275 GORABQ5T7V8 394 aa9.79□□□□□ -0.84
ZNF541-204ENST00000487275 BOLA2Q9H3K6 86 aa9.79□□□□□ -0.84
ZNF541-204ENST00000487275 TUBGCP6Q96RT7 1819 aa9.78□□□□□ -0.84
ZNF541-204ENST00000487275 PDE8BO95263 885 aa9.78□□□□□ -0.84
ZNF541-204ENST00000487275 SEC24BO95487 1268 aa9.78□□□□□ -0.84
ZNF541-204ENST00000487275 MMP10P09238 476 aa9.78□□□□□ -0.84
ZNF541-204ENST00000487275 SLC5A1P13866 664 aa9.78□□□□□ -0.84
ZNF541-204ENST00000487275 PUM3Q15397 648 aaKnown RBP9.78□□□□□ -0.84
ZNF541-204ENST00000487275 CCDC158Q5M9N0 1113 aa9.78□□□□□ -0.84
ZNF541-204ENST00000487275 TTC39AQ5SRH9 613 aa9.78□□□□□ -0.84
ZNF541-204ENST00000487275 MSL1Q68DK7 614 aa9.78□□□□□ -0.84
ZNF541-204ENST00000487275 VGLL2Q8N8G2 317 aa9.78□□□□□ -0.84
ZNF541-204ENST00000487275 LPIN2Q92539 896 aa9.78□□□□□ -0.84
ZNF541-204ENST00000487275 RPGRQ92834 1020 aaKnown RBP9.78□□□□□ -0.84
ZNF541-204ENST00000487275 BSDC1Q9NW68 430 aaPredicted RBP9.78□□□□□ -0.84
ZNF541-204ENST00000487275 IFIT1P09914 478 aaKnown RBP9.77□□□□□ -0.85
ZNF541-204ENST00000487275 ADORA1P30542 326 aa9.77□□□□□ -0.85
ZNF541-204ENST00000487275 ANP32AP39687 249 aaKnown RBP9.77□□□□□ -0.85
ZNF541-204ENST00000487275 RPS8P62241 208 aaKnown RBP9.77□□□□□ -0.85
ZNF541-204ENST00000487275 CHRNDQ07001 517 aa9.77□□□□□ -0.85
ZNF541-204ENST00000487275 HELBQ8NG08 1087 aaPredicted RBP9.77□□□□□ -0.85
ZNF541-204ENST00000487275 CELF1Q92879 486 aaKnown RBP9.77□□□□□ -0.85
ZNF541-204ENST00000487275 EVI5LQ96CN4 794 aa9.77□□□□□ -0.85
ZNF541-204ENST00000487275 XAGE2Q96GT9 111 aa9.77□□□□□ -0.85
ZNF541-204ENST00000487275 RBM17Q96I25 401 aaKnown RBP9.77□□□□□ -0.85
ZNF541-204ENST00000487275 TAF5LO75529 589 aa9.76□□□□□ -0.85
ZNF541-204ENST00000487275 GRAPQ13588 217 aa9.76□□□□□ -0.85
ZNF541-204ENST00000487275 GRAPLQ8TC17 118 aaPredicted RBP9.76□□□□□ -0.85
ZNF541-204ENST00000487275 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.76□□□□□ -0.85
ZNF541-204ENST00000487275 DNAJC2Q99543 621 aaKnown RBP9.76□□□□□ -0.85
ZNF541-204ENST00000487275 HAUS7Q99871 368 aa9.76□□□□□ -0.85
ZNF541-204ENST00000487275 TNRC6CQ9HCJ0 1690 aaKnown RBP9.75□□□□□ -0.85
ZNF541-204ENST00000487275 HIP1O00291 1037 aa9.75□□□□□ -0.85
ZNF541-204ENST00000487275 FGFR2P21802 821 aa9.75□□□□□ -0.85
ZNF541-204ENST00000487275 CHMLP26374 656 aa9.75□□□□□ -0.85
ZNF541-204ENST00000487275 KCNJ4P48050 445 aa9.75□□□□□ -0.85
ZNF541-204ENST00000487275 CRY2Q49AN0 593 aa9.75□□□□□ -0.85
ZNF541-204ENST00000487275 FSD1Q9BTV5 496 aa9.75□□□□□ -0.85
ZNF541-204ENST00000487275 BRIP1Q9BX63 1249 aa9.75□□□□□ -0.85
ZNF541-204ENST00000487275 ANKRD2Q9GZV1 360 aa9.75□□□□□ -0.85
ZNF541-204ENST00000487275 DIAPH3Q9NSV4 1193 aa9.75□□□□□ -0.85
ZNF541-204ENST00000487275 MINPP1Q9UNW1 487 aa9.75□□□□□ -0.85
ZNF541-204ENST00000487275 EP400Q96L91 3159 aa9.75□□□□□ -0.85
ZNF541-204ENST00000487275 QSER1Q2KHR3 1735 aa9.74□□□□□ -0.85
ZNF541-204ENST00000487275 KLRG2A4D1S0 409 aaPredicted RBP9.74□□□□□ -0.85
ZNF541-204ENST00000487275 REC8O95072 547 aa9.74□□□□□ -0.85
ZNF541-204ENST00000487275 UQCRFS1P1P0C7P4 283 aa9.74□□□□□ -0.85
ZNF541-204ENST00000487275 PDE6BP35913 854 aa9.74□□□□□ -0.85
ZNF541-204ENST00000487275 UBE4AQ14139 1066 aa9.74□□□□□ -0.85
ZNF541-204ENST00000487275 RUFY2Q8WXA3 655 aa9.74□□□□□ -0.85
ZNF541-204ENST00000487275 ESYT1Q9BSJ8 1104 aa9.74□□□□□ -0.85
ZNF541-204ENST00000487275 C22orf23Q9BZE7 217 aa9.74□□□□□ -0.85
ZNF541-204ENST00000487275 SPEF2Q9C093 1822 aa9.73□□□□□ -0.85
ZNF541-204ENST00000487275 GOLIM4O00461 696 aa9.73□□□□□ -0.85
ZNF541-204ENST00000487275 CCDC102BQ68D86 513 aa9.73□□□□□ -0.85
ZNF541-204ENST00000487275 SLC16A10Q8TF71 515 aa9.73□□□□□ -0.85
ZNF541-204ENST00000487275 EDC3Q96F86 508 aaKnown RBP9.73□□□□□ -0.85
ZNF541-204ENST00000487275 ZNF512BQ96KM6 892 aaPredicted RBP9.73□□□□□ -0.85
ZNF541-204ENST00000487275 TBC1D32Q96NH3 1257 aa9.73□□□□□ -0.85
ZNF541-204ENST00000487275 CRAMP1Q96RY5 1269 aa9.73□□□□□ -0.85
ZNF541-204ENST00000487275 PAG1Q9NWQ8 432 aa9.73□□□□□ -0.85
ZNF541-204ENST00000487275 COL4A1P02462 1669 aa9.73□□□□□ -0.85
ZNF541-204ENST00000487275 SNAP23O00161 211 aa9.72□□□□□ -0.85
ZNF541-204ENST00000487275 BBOX1O75936 387 aa9.72□□□□□ -0.85
ZNF541-204ENST00000487275 NPR1P16066 1061 aa9.72□□□□□ -0.85
ZNF541-204ENST00000487275 HOXA10P31260 410 aaPredicted RBP9.72□□□□□ -0.85
ZNF541-204ENST00000487275 PHKA1P46020 1223 aa9.72□□□□□ -0.85
ZNF541-204ENST00000487275 FKBP4Q02790 459 aaKnown RBP eCLIP9.72□□□□□ -0.85
ZNF541-204ENST00000487275 LRRFIP1Q32MZ4 808 aaKnown RBP9.72□□□□□ -0.85
ZNF541-204ENST00000487275 CAVIN4Q5BKX8 364 aa9.72□□□□□ -0.85
ZNF541-204ENST00000487275 CWC27Q6UX04 472 aaKnown RBP9.72□□□□□ -0.85
ZNF541-204ENST00000487275 TMC4Q7Z404 712 aa9.72□□□□□ -0.85
ZNF541-204ENST00000487275 KBTBD3Q8NAB2 608 aa9.72□□□□□ -0.85
ZNF541-204ENST00000487275 UPF1Q92900 1129 aaKnown RBP eCLIP9.72□□□□□ -0.85
ZNF541-204ENST00000487275 SNRKQ9NRH2 765 aa9.72□□□□□ -0.85
ZNF541-204ENST00000487275 ANKIB1Q9P2G1 1089 aa9.72□□□□□ -0.85
ZNF541-204ENST00000487275 NDUFB9Q9Y6M9 179 aa9.72□□□□□ -0.85
ZNF541-204ENST00000487275 NRXN2Q9P2S2 1712 aa9.72□□□□□ -0.85
ZNF541-204ENST00000487275 CASZ1Q86V15 1759 aa9.72□□□□□ -0.85
ZNF541-204ENST00000487275 RFX7Q2KHR2 1363 aa9.72□□□□□ -0.85
ZNF541-204ENST00000487275 PPEF1O14829 653 aaPredicted RBP9.71□□□□□ -0.86
ZNF541-204ENST00000487275 SRGNP10124 158 aa9.71□□□□□ -0.86
ZNF541-204ENST00000487275 ARID4AP29374 1257 aaPredicted RBP9.71□□□□□ -0.86
ZNF541-204ENST00000487275 ALDH1B1P30837 517 aa9.71□□□□□ -0.86
ZNF541-204ENST00000487275 MCAMP43121 646 aa9.71□□□□□ -0.86
ZNF541-204ENST00000487275 ZAP70P43403 619 aa9.71□□□□□ -0.86
ZNF541-204ENST00000487275 KIAA1211Q6ZU35 1233 aa9.71□□□□□ -0.86
ZNF541-204ENST00000487275 VPS37DQ86XT2 251 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms