RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 SEPT12Q8IYM1 358 aa24.43■■□□□ 1.5
HPS3-206ENST00000486530 TTLL11Q8NHH1 800 aa24.43■■□□□ 1.5
HPS3-206ENST00000486530 RIC1Q4ADV7 1423 aa24.42■■□□□ 1.5
HPS3-206ENST00000486530 UBN2Q6ZU65 1347 aa24.42■■□□□ 1.5
HPS3-206ENST00000486530 TAF5LO75529 589 aa24.42■■□□□ 1.5
HPS3-206ENST00000486530 PSMA5P28066 241 aa24.42■■□□□ 1.5
HPS3-206ENST00000486530 ADCK5Q3MIX3 580 aa24.42■■□□□ 1.5
HPS3-206ENST00000486530 CCDC85AQ96PX6 553 aaPredicted RBP24.42■■□□□ 1.5
HPS3-206ENST00000486530 PDE8AO60658 829 aa24.41■■□□□ 1.5
HPS3-206ENST00000486530 IFIT1P09914 478 aaKnown RBP24.41■■□□□ 1.5
HPS3-206ENST00000486530 MCMDC2Q4G0Z9 681 aa24.41■■□□□ 1.5
HPS3-206ENST00000486530 SYNE4Q8N205 404 aa24.41■■□□□ 1.5
HPS3-206ENST00000486530 PDRG1Q9NUG6 133 aa24.41■■□□□ 1.5
HPS3-206ENST00000486530 LRP5O75197 1615 aa24.41■■□□□ 1.5
HPS3-206ENST00000486530 ANKRD18BA2A2Z9 1011 aa24.41■■□□□ 1.5
HPS3-206ENST00000486530 ITGA6P23229 1130 aa24.41■■□□□ 1.5
HPS3-206ENST00000486530 RUFY3Q7L099 469 aa24.41■■□□□ 1.5
HPS3-206ENST00000486530 LINC00116Q8NCU8 138 aa24.41■■□□□ 1.5
HPS3-206ENST00000486530 AK7Q96M32 723 aa24.41■■□□□ 1.5
HPS3-206ENST00000486530 ZDHHC9Q9Y397 364 aa24.41■■□□□ 1.5
HPS3-206ENST00000486530 LAMB2P55268 1798 aa24.4■■□□□ 1.5
HPS3-206ENST00000486530 BCORQ6W2J9 1755 aa24.4■■□□□ 1.5
HPS3-206ENST00000486530 GOLIM4O00461 696 aa24.4■■□□□ 1.5
HPS3-206ENST00000486530 USPL1Q5W0Q7 1092 aa24.4■■□□□ 1.5
HPS3-206ENST00000486530 GREM2Q9H772 168 aa24.4■■□□□ 1.5
HPS3-206ENST00000486530 TSGA10IPQ3SY00 556 aa24.39■■□□□ 1.5
HPS3-206ENST00000486530 CCDC158Q5M9N0 1113 aa24.39■■□□□ 1.5
HPS3-206ENST00000486530 ABCC12Q96J65 1359 aa24.39■■□□□ 1.49
HPS3-206ENST00000486530 CAMTA2O94983 1202 aa24.38■■□□□ 1.49
HPS3-206ENST00000486530 BRD1O95696 1058 aa24.38■■□□□ 1.49
HPS3-206ENST00000486530 XAGE2Q96GT9 111 aa24.38■■□□□ 1.49
HPS3-206ENST00000486530 ZSCAN31Q96LW9 406 aaPredicted RBP24.38■■□□□ 1.49
HPS3-206ENST00000486530 HELLSQ9NRZ9 838 aa24.38■■□□□ 1.49
HPS3-206ENST00000486530 RIPOR2Q9Y4F9 1068 aa24.38■■□□□ 1.49
HPS3-206ENST00000486530 NHSQ6T4R5 1651 aa24.37■■□□□ 1.49
HPS3-206ENST00000486530 CPA1P15085 419 aa24.37■■□□□ 1.49
HPS3-206ENST00000486530 KCNQ4P56696 695 aa24.37■■□□□ 1.49
HPS3-206ENST00000486530 GORABQ5T7V8 394 aa24.37■■□□□ 1.49
HPS3-206ENST00000486530 U3KPZ7 1027 aaPredicted RBP24.37■■□□□ 1.49
HPS3-206ENST00000486530 DDX60Q8IY21 1712 aaKnown RBP24.37■■□□□ 1.49
HPS3-206ENST00000486530 MYH7P12883 1935 aa24.37■■□□□ 1.49
HPS3-206ENST00000486530 METTL24Q5JXM2 366 aa24.36■■□□□ 1.49
HPS3-206ENST00000486530 TTC39AQ5SRH9 613 aa24.36■■□□□ 1.49
HPS3-206ENST00000486530 LDHAL6AQ6ZMR3 332 aa24.36■■□□□ 1.49
HPS3-206ENST00000486530 SH2B1Q9NRF2 756 aaPredicted RBP24.36■■□□□ 1.49
HPS3-206ENST00000486530 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.36■■□□□ 1.49
HPS3-206ENST00000486530 KRT32Q14532 448 aa24.36■■□□□ 1.49
HPS3-206ENST00000486530 PARP10Q53GL7 1025 aa24.36■■□□□ 1.49
HPS3-206ENST00000486530 GZF1Q9H116 711 aaPredicted RBP24.36■■□□□ 1.49
HPS3-206ENST00000486530 BTAF1O14981 1849 aa24.36■■□□□ 1.49
HPS3-206ENST00000486530 ARAP2Q8WZ64 1704 aa24.35■■□□□ 1.49
HPS3-206ENST00000486530 LRRFIP1Q32MZ4 808 aaKnown RBP24.35■■□□□ 1.49
HPS3-206ENST00000486530 MCTP1Q6DN14 999 aa24.35■■□□□ 1.49
HPS3-206ENST00000486530 ADORA1P30542 326 aa24.34■■□□□ 1.49
HPS3-206ENST00000486530 ATP2B3Q16720 1220 aa24.34■■□□□ 1.49
HPS3-206ENST00000486530 ZNF772Q68DY9 489 aaPredicted RBP24.34■■□□□ 1.49
HPS3-206ENST00000486530 BLOC1S2Q6QNY1 142 aa24.34■■□□□ 1.49
HPS3-206ENST00000486530 CNNM1Q9NRU3 951 aa24.34■■□□□ 1.49
HPS3-206ENST00000486530 ZMYM1Q5SVZ6 1142 aa24.34■■□□□ 1.49
HPS3-206ENST00000486530 L1TD1Q5T7N2 865 aaKnown RBP24.34■■□□□ 1.49
HPS3-206ENST00000486530 CCDC129Q6ZRS4 1044 aa24.34■■□□□ 1.49
HPS3-206ENST00000486530 SEC62Q99442 399 aaKnown RBP24.34■■□□□ 1.49
HPS3-206ENST00000486530 ALDH8A1Q9H2A2 487 aaPredicted RBP24.34■■□□□ 1.49
HPS3-206ENST00000486530 CNTNAP4Q9C0A0 1308 aa24.33■■□□□ 1.49
HPS3-206ENST00000486530 CHGBP05060 677 aa24.33■■□□□ 1.49
HPS3-206ENST00000486530 ANKRD1Q15327 319 aa24.33■■□□□ 1.49
HPS3-206ENST00000486530 SUSD4Q5VX71 490 aa24.33■■□□□ 1.49
HPS3-206ENST00000486530 UTP14AQ9BVJ6 771 aaKnown RBP24.33■■□□□ 1.49
HPS3-206ENST00000486530 RNF113AO15541 343 aaKnown RBP24.32■■□□□ 1.48
HPS3-206ENST00000486530 RC3H1Q5TC82 1133 aaKnown RBP24.32■■□□□ 1.48
HPS3-206ENST00000486530 AKAP11Q9UKA4 1901 aa24.32■■□□□ 1.48
HPS3-206ENST00000486530 HSP90B1P14625 803 aaKnown RBP24.32■■□□□ 1.48
HPS3-206ENST00000486530 RPS6KB1P23443 525 aa24.32■■□□□ 1.48
HPS3-206ENST00000486530 KLHL40Q2TBA0 621 aa24.32■■□□□ 1.48
HPS3-206ENST00000486530 VGLL2Q8N8G2 317 aa24.32■■□□□ 1.48
HPS3-206ENST00000486530 WDR33Q9C0J8 1336 aaKnown RBP24.32■■□□□ 1.48
HPS3-206ENST00000486530 DSCC1Q9BVC3 393 aa24.31■■□□□ 1.48
HPS3-206ENST00000486530 SBF2Q86WG5 1849 aa24.3■■□□□ 1.48
HPS3-206ENST00000486530 FKBP4Q02790 459 aaKnown RBP eCLIP24.3■■□□□ 1.48
HPS3-206ENST00000486530 ZNF652Q9Y2D9 606 aa24.3■■□□□ 1.48
HPS3-206ENST00000486530 LARGE1O95461 756 aa24.3■■□□□ 1.48
HPS3-206ENST00000486530 ZFYP08048 801 aaPredicted RBP24.3■■□□□ 1.48
HPS3-206ENST00000486530 LARP6Q9BRS8 491 aaKnown RBP24.3■■□□□ 1.48
HPS3-206ENST00000486530 LMBRD1Q9NUN5 540 aa24.3■■□□□ 1.48
HPS3-206ENST00000486530 SMC3Q9UQE7 1217 aa24.3■■□□□ 1.48
HPS3-206ENST00000486530 LAMA4Q16363 1823 aa24.3■■□□□ 1.48
HPS3-206ENST00000486530 FSD2A1L4K1 749 aa24.29■■□□□ 1.48
HPS3-206ENST00000486530 GOLGA6L3A6NEY3 463 aa24.29■■□□□ 1.48
HPS3-206ENST00000486530 ZNF512BQ96KM6 892 aaPredicted RBP24.29■■□□□ 1.48
HPS3-206ENST00000486530 BCL11BQ9C0K0 894 aaPredicted RBP24.29■■□□□ 1.48
HPS3-206ENST00000486530 CCNL1Q9UK58 526 aaPredicted RBP24.29■■□□□ 1.48
HPS3-206ENST00000486530 TAF6LQ9Y6J9 622 aa24.29■■□□□ 1.48
HPS3-206ENST00000486530 DDX49Q9Y6V7 483 aaKnown RBP24.29■■□□□ 1.48
HPS3-206ENST00000486530 MROH5Q6ZUA9 1318 aa24.29■■□□□ 1.48
HPS3-206ENST00000486530 SCN7AQ01118 1682 aa24.29■■□□□ 1.48
HPS3-206ENST00000486530 PDE8BO95263 885 aa24.28■■□□□ 1.48
HPS3-206ENST00000486530 ISY1Q9ULR0 285 aaKnown RBP24.28■■□□□ 1.48
HPS3-206ENST00000486530 MAST3O60307 1309 aa24.28■■□□□ 1.48
HPS3-206ENST00000486530 CCDC83Q8IWF9 413 aa24.28■■□□□ 1.48
HPS3-206ENST00000486530 RTL9Q8NET4 1388 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms